RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 MSH5O43196 834 aa14.1□□□□□ -0.15
MUC4-201ENST00000308466 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
MUC4-201ENST00000308466 ADAMTS12P58397 1594 aa14.09□□□□□ -0.15
MUC4-201ENST00000308466 TCOF1Q13428 1488 aaKnown RBP14.08□□□□□ -0.15
MUC4-201ENST00000308466 UBE2Q2Q8WVN8 375 aa14.07□□□□□ -0.16
MUC4-201ENST00000308466 KANK1Q14678 1352 aa14.07□□□□□ -0.16
MUC4-201ENST00000308466 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
MUC4-201ENST00000308466 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
MUC4-201ENST00000308466 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.07□□□□□ -0.16
MUC4-201ENST00000308466 DISP1Q96F81 1524 aa14.06□□□□□ -0.16
MUC4-201ENST00000308466 SAFB2Q14151 953 aaKnown RBP eCLIP14.06□□□□□ -0.16
MUC4-201ENST00000308466 PNISRQ8TF01 805 aaKnown RBP14.05□□□□□ -0.16
MUC4-201ENST00000308466 PODXL2Q9NZ53 605 aa14.05□□□□□ -0.16
MUC4-201ENST00000308466 PLIN1O60240 522 aa14.05□□□□□ -0.16
MUC4-201ENST00000308466 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
MUC4-201ENST00000308466 ARHGAP5Q13017 1502 aa14.04□□□□□ -0.16
MUC4-201ENST00000308466 NUTM2DQ5VT03 806 aaPredicted RBP14.04□□□□□ -0.16
MUC4-201ENST00000308466 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
MUC4-201ENST00000308466 ARID4BQ4LE39 1312 aaPredicted RBP14.04□□□□□ -0.16
MUC4-201ENST00000308466 CCDC146Q8IYE0 955 aa14.02□□□□□ -0.16
MUC4-201ENST00000308466 EXOC6Q8TAG9 804 aa14.02□□□□□ -0.16
MUC4-201ENST00000308466 PBRM1Q86U86 1689 aa14.02□□□□□ -0.16
MUC4-201ENST00000308466 KIAA0556O60303 1618 aa14.02□□□□□ -0.16
MUC4-201ENST00000308466 ATP10BO94823 1461 aa14.02□□□□□ -0.16
MUC4-201ENST00000308466 CDCA7LQ96GN5 454 aa14.01□□□□□ -0.17
MUC4-201ENST00000308466 NOP58Q9Y2X3 529 aaKnown RBP14.01□□□□□ -0.17
MUC4-201ENST00000308466 KDM6BO15054 1643 aa14□□□□□ -0.17
MUC4-201ENST00000308466 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
MUC4-201ENST00000308466 TRAK1Q9UPV9 953 aa13.99□□□□□ -0.17
MUC4-201ENST00000308466 SLC24A1O60721 1099 aa13.99□□□□□ -0.17
MUC4-201ENST00000308466 RGS3P49796 1198 aa13.99□□□□□ -0.17
MUC4-201ENST00000308466 VSIG10Q8N0Z9 540 aa13.99□□□□□ -0.17
MUC4-201ENST00000308466 STK26Q9P289 416 aa13.98□□□□□ -0.17
MUC4-201ENST00000308466 FRAT1Q92837 279 aaPredicted RBP13.98□□□□□ -0.17
MUC4-201ENST00000308466 RRP1P56182 461 aaKnown RBP13.97□□□□□ -0.17
MUC4-201ENST00000308466 NEFMP07197 916 aa13.97□□□□□ -0.17
MUC4-201ENST00000308466 MORC1Q86VD1 984 aa13.97□□□□□ -0.17
MUC4-201ENST00000308466 PDE3BQ13370 1112 aa13.96□□□□□ -0.17
MUC4-201ENST00000308466 ESF1Q9H501 851 aaKnown RBP13.96□□□□□ -0.17
MUC4-201ENST00000308466 LAS1LQ9Y4W2 734 aaKnown RBP13.96□□□□□ -0.18
MUC4-201ENST00000308466 A0A0U1RQG5 324 aaPredicted RBP13.95□□□□□ -0.18
MUC4-201ENST00000308466 CFAP70Q5T0N1 1121 aa13.95□□□□□ -0.18
MUC4-201ENST00000308466 BRD4O60885 1362 aaPredicted RBP13.95□□□□□ -0.18
MUC4-201ENST00000308466 PZPP20742 1482 aa13.95□□□□□ -0.18
MUC4-201ENST00000308466 CCDC141Q6ZP82 1450 aa13.95□□□□□ -0.18
MUC4-201ENST00000308466 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
MUC4-201ENST00000308466 ADAMTS8Q9UP79 889 aa13.94□□□□□ -0.18
MUC4-201ENST00000308466 KIF14Q15058 1648 aa13.94□□□□□ -0.18
MUC4-201ENST00000308466 WASHC2CQ9Y4E1 1318 aa13.94□□□□□ -0.18
MUC4-201ENST00000308466 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
MUC4-201ENST00000308466 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
MUC4-201ENST00000308466 POGKQ9P215 609 aa13.92□□□□□ -0.18
MUC4-201ENST00000308466 U2SURPO15042 1029 aaKnown RBP13.92□□□□□ -0.18
MUC4-201ENST00000308466 PLEKHH2Q8IVE3 1493 aa13.92□□□□□ -0.18
MUC4-201ENST00000308466 SRPK2P78362 688 aaKnown RBP13.92□□□□□ -0.18
MUC4-201ENST00000308466 APAF1O14727 1248 aa13.91□□□□□ -0.18
MUC4-201ENST00000308466 DNMT1P26358 1616 aaKnown RBP13.91□□□□□ -0.18
MUC4-201ENST00000308466 MLECQ14165 292 aa13.91□□□□□ -0.18
MUC4-201ENST00000308466 CRBNQ96SW2 442 aa13.91□□□□□ -0.18
MUC4-201ENST00000308466 TEX14Q8IWB6 1497 aa13.9□□□□□ -0.18
MUC4-201ENST00000308466 TMEM132EQ6IEE7 984 aa13.89□□□□□ -0.19
MUC4-201ENST00000308466 RRP7AQ9Y3A4 280 aaKnown RBP13.89□□□□□ -0.19
MUC4-201ENST00000308466 SCAPERQ9BY12 1400 aa13.89□□□□□ -0.19
MUC4-201ENST00000308466 FANCIQ9NVI1 1328 aa13.89□□□□□ -0.19
MUC4-201ENST00000308466 EIF3AQ14152 1382 aaKnown RBP13.89□□□□□ -0.19
MUC4-201ENST00000308466 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
MUC4-201ENST00000308466 ARXQ96QS3 562 aa13.88□□□□□ -0.19
MUC4-201ENST00000308466 SMG6Q86US8 1419 aaKnown RBP13.88□□□□□ -0.19
MUC4-201ENST00000308466 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
MUC4-201ENST00000308466 NUP160Q12769 1436 aa13.87□□□□□ -0.19
MUC4-201ENST00000308466 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
MUC4-201ENST00000308466 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
MUC4-201ENST00000308466 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
MUC4-201ENST00000308466 U2AF1L5P0DN76 240 aaPredicted RBP13.86□□□□□ -0.19
MUC4-201ENST00000308466 U2AF1Q01081 240 aaKnown RBP eCLIP13.86□□□□□ -0.19
MUC4-201ENST00000308466 ERBINQ96RT1 1412 aa13.85□□□□□ -0.19
MUC4-201ENST00000308466 GCC2Q8IWJ2 1684 aa13.85□□□□□ -0.19
MUC4-201ENST00000308466 DHX29Q7Z478 1369 aaKnown RBP13.85□□□□□ -0.19
MUC4-201ENST00000308466 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
MUC4-201ENST00000308466 ITSN2Q9NZM3 1697 aa13.84□□□□□ -0.19
MUC4-201ENST00000308466 LRRIQ1Q96JM4 1722 aa13.84□□□□□ -0.19
MUC4-201ENST00000308466 PDE4AP27815 886 aa13.84□□□□□ -0.19
MUC4-201ENST00000308466 SPATA31E1Q6ZUB1 1445 aa13.84□□□□□ -0.19
MUC4-201ENST00000308466 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.2
MUC4-201ENST00000308466 CLUAP1Q96AJ1 413 aa13.82□□□□□ -0.2
MUC4-201ENST00000308466 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
MUC4-201ENST00000308466 UPF2Q9HAU5 1272 aaKnown RBP13.82□□□□□ -0.2
MUC4-201ENST00000308466 SYCP2Q9BX26 1530 aa13.81□□□□□ -0.2
MUC4-201ENST00000308466 BCL2L13Q9BXK5 485 aa13.81□□□□□ -0.2
MUC4-201ENST00000308466 RALGAPBQ86X10 1494 aa13.81□□□□□ -0.2
MUC4-201ENST00000308466 FTSJ3Q8IY81 847 aaKnown RBP13.81□□□□□ -0.2
MUC4-201ENST00000308466 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
MUC4-201ENST00000308466 CYB5RLQ6IPT4 315 aa13.81□□□□□ -0.2
MUC4-201ENST00000308466 CENPJQ9HC77 1338 aaPredicted RBP13.81□□□□□ -0.2
MUC4-201ENST00000308466 SLC12A5Q9H2X9 1139 aa13.8□□□□□ -0.2
MUC4-201ENST00000308466 DDRGK1Q96HY6 314 aa13.8□□□□□ -0.2
MUC4-201ENST00000308466 ADGRL2O95490 1459 aa13.8□□□□□ -0.2
MUC4-201ENST00000308466 STAC3Q96MF2 364 aa13.79□□□□□ -0.2
MUC4-201ENST00000308466 TESK2Q96S53 571 aa13.79□□□□□ -0.2
MUC4-201ENST00000308466 SKAP1Q86WV1 359 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms