RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 ASXL2Q76L83 1435 aa23.05■■□□□ 1.28
TVP23B-201ENST00000307767 ZFYVE16Q7Z3T8 1539 aa23.05■■□□□ 1.28
TVP23B-201ENST00000307767 POLR1AO95602 1720 aaPredicted RBP23.04■■□□□ 1.28
TVP23B-201ENST00000307767 ATP10AO60312 1499 aa23.03■■□□□ 1.28
TVP23B-201ENST00000307767 FANCAO15360 1455 aa23.02■■□□□ 1.28
TVP23B-201ENST00000307767 SPAG9O60271 1321 aaKnown RBP23.02■■□□□ 1.28
TVP23B-201ENST00000307767 DCAF11Q8TEB1 546 aa23.02■■□□□ 1.28
TVP23B-201ENST00000307767 CCDC144AA2RUR9 1427 aa23.01■■□□□ 1.27
TVP23B-201ENST00000307767 KDM2AQ9Y2K7 1162 aa23■■□□□ 1.27
TVP23B-201ENST00000307767 CCDC184Q52MB2 194 aa22.97■■□□□ 1.27
TVP23B-201ENST00000307767 PRKRIP1Q9H875 184 aaPredicted RBP22.97■■□□□ 1.27
TVP23B-201ENST00000307767 A2MP01023 1474 aa22.97■■□□□ 1.27
TVP23B-201ENST00000307767 PRAG1Q86YV5 1406 aa22.96■■□□□ 1.27
TVP23B-201ENST00000307767 INO80Q9ULG1 1556 aaPredicted RBP22.96■■□□□ 1.27
TVP23B-201ENST00000307767 CARD11Q9BXL7 1154 aa22.95■■□□□ 1.26
TVP23B-201ENST00000307767 DHX29Q7Z478 1369 aaKnown RBP22.94■■□□□ 1.26
TVP23B-201ENST00000307767 SCAPERQ9BY12 1400 aa22.94■■□□□ 1.26
TVP23B-201ENST00000307767 ATP7AQ04656 1500 aa22.93■■□□□ 1.26
TVP23B-201ENST00000307767 ADGRL1O94910 1474 aa22.92■■□□□ 1.26
TVP23B-201ENST00000307767 SUPT16HQ9Y5B9 1047 aaKnown RBP22.91■■□□□ 1.26
TVP23B-201ENST00000307767 ARID4BQ4LE39 1312 aaPredicted RBP22.91■■□□□ 1.26
TVP23B-201ENST00000307767 DEPDC5O75140 1603 aa22.91■■□□□ 1.26
TVP23B-201ENST00000307767 RGL3Q3MIN7 710 aa22.91■■□□□ 1.26
TVP23B-201ENST00000307767 TRPM1Q7Z4N2 1603 aa22.91■■□□□ 1.26
TVP23B-201ENST00000307767 ST20-MTHFSA0A0A6YYL1 179 aa22.89■■□□□ 1.25
TVP23B-201ENST00000307767 VWDEQ8N2E2 1590 aa22.89■■□□□ 1.25
TVP23B-201ENST00000307767 GPRASP1Q5JY77 1395 aa22.88■■□□□ 1.25
TVP23B-201ENST00000307767 E9PCH4 1651 aa22.88■■□□□ 1.25
TVP23B-201ENST00000307767 NBPF1Q3BBV0 1214 aa22.88■■□□□ 1.25
TVP23B-201ENST00000307767 ROCK2O75116 1388 aaKnown RBP22.86■■□□□ 1.25
TVP23B-201ENST00000307767 PTPRTO14522 1441 aa22.86■■□□□ 1.25
TVP23B-201ENST00000307767 MROH1Q8NDA8 1641 aa22.84■■□□□ 1.25
TVP23B-201ENST00000307767 TRPM2O94759 1503 aa22.81■■□□□ 1.24
TVP23B-201ENST00000307767 KIDINS220Q9ULH0 1771 aa22.81■■□□□ 1.24
TVP23B-201ENST00000307767 NPM1P06748 294 aaKnown RBP eCLIP22.81■■□□□ 1.24
TVP23B-201ENST00000307767 PRDM15P57071 1507 aaPredicted RBP22.79■■□□□ 1.24
TVP23B-201ENST00000307767 CD109Q6YHK3 1445 aa22.79■■□□□ 1.24
TVP23B-201ENST00000307767 TET3O43151 1660 aa22.79■■□□□ 1.24
TVP23B-201ENST00000307767 LAMC1P11047 1609 aa22.78■■□□□ 1.24
TVP23B-201ENST00000307767 KIF3BO15066 747 aa22.78■■□□□ 1.24
TVP23B-201ENST00000307767 EIF2AK4Q9P2K8 1649 aaKnown RBP22.78■■□□□ 1.24
TVP23B-201ENST00000307767 HNRNPUQ00839 825 aaKnown RBP eCLIP22.76■■□□□ 1.23
TVP23B-201ENST00000307767 POLR3GLQ9BT43 218 aa22.76■■□□□ 1.23
TVP23B-201ENST00000307767 ZNF518AQ6AHZ1 1483 aa22.76■■□□□ 1.23
TVP23B-201ENST00000307767 CLTCL1P53675 1640 aa22.76■■□□□ 1.23
TVP23B-201ENST00000307767 TESK2Q96S53 571 aa22.75■■□□□ 1.23
TVP23B-201ENST00000307767 SPHKAPQ2M3C7 1700 aa22.74■■□□□ 1.23
TVP23B-201ENST00000307767 MRS2Q9HD23 443 aa22.74■■□□□ 1.23
TVP23B-201ENST00000307767 POGZQ7Z3K3 1410 aa22.73■■□□□ 1.23
TVP23B-201ENST00000307767 RNF17Q9BXT8 1623 aaKnown RBP22.71■■□□□ 1.23
TVP23B-201ENST00000307767 KANK1Q14678 1352 aa22.71■■□□□ 1.23
TVP23B-201ENST00000307767 MADDQ8WXG6 1647 aa22.7■■□□□ 1.22
TVP23B-201ENST00000307767 FRMPD1Q5SYB0 1578 aa22.7■■□□□ 1.22
TVP23B-201ENST00000307767 MLH3Q9UHC1 1453 aa22.7■■□□□ 1.22
TVP23B-201ENST00000307767 CEP152O94986 1710 aa22.7■■□□□ 1.22
TVP23B-201ENST00000307767 MYT1LQ9UL68 1186 aa22.69■■□□□ 1.22
TVP23B-201ENST00000307767 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
TVP23B-201ENST00000307767 LMTK2Q8IWU2 1503 aa22.68■■□□□ 1.22
TVP23B-201ENST00000307767 COL17A1Q9UMD9 1497 aaPredicted RBP22.67■■□□□ 1.22
TVP23B-201ENST00000307767 CFAP74Q9C0B2 1584 aa22.67■■□□□ 1.22
TVP23B-201ENST00000307767 DISP3Q9P2K9 1392 aa22.67■■□□□ 1.22
TVP23B-201ENST00000307767 EFCAB6Q5THR3 1501 aa22.66■■□□□ 1.22
TVP23B-201ENST00000307767 NEURL4Q96JN8 1562 aa22.65■■□□□ 1.22
TVP23B-201ENST00000307767 UGGT1Q9NYU2 1555 aa22.65■■□□□ 1.22
TVP23B-201ENST00000307767 PPRC1Q5VV67 1664 aaKnown RBP22.64■■□□□ 1.21
TVP23B-201ENST00000307767 FKBP8Q14318 412 aa22.64■■□□□ 1.21
TVP23B-201ENST00000307767 PER1O15534 1290 aaPredicted RBP22.63■■□□□ 1.21
TVP23B-201ENST00000307767 NEO1Q92859 1461 aa22.63■■□□□ 1.21
TVP23B-201ENST00000307767 STAC3Q96MF2 364 aa22.62■■□□□ 1.21
TVP23B-201ENST00000307767 HECW2Q9P2P5 1572 aa22.61■■□□□ 1.21
TVP23B-201ENST00000307767 CNGB1Q14028 1251 aaPredicted RBP22.61■■□□□ 1.21
TVP23B-201ENST00000307767 ABCA6Q8N139 1617 aa22.6■■□□□ 1.21
TVP23B-201ENST00000307767 RAPGEF3O95398 923 aa22.59■■□□□ 1.21
TVP23B-201ENST00000307767 IQGAP1P46940 1657 aa22.59■■□□□ 1.21
TVP23B-201ENST00000307767 ZBED9Q6R2W3 1325 aa22.58■■□□□ 1.21
TVP23B-201ENST00000307767 PNISRQ8TF01 805 aaKnown RBP22.58■■□□□ 1.2
TVP23B-201ENST00000307767 NPATQ14207 1427 aa22.56■■□□□ 1.2
TVP23B-201ENST00000307767 KTN1Q86UP2 1357 aaKnown RBP22.55■■□□□ 1.2
TVP23B-201ENST00000307767 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
TVP23B-201ENST00000307767 MAP3K4Q9Y6R4 1608 aa22.54■■□□□ 1.2
TVP23B-201ENST00000307767 MYOM2P54296 1465 aa22.54■■□□□ 1.2
TVP23B-201ENST00000307767 PARD3Q8TEW0 1356 aa22.53■■□□□ 1.2
TVP23B-201ENST00000307767 RALBP1Q15311 655 aa22.53■■□□□ 1.2
TVP23B-201ENST00000307767 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
TVP23B-201ENST00000307767 SCAF11Q99590 1463 aaKnown RBP22.53■■□□□ 1.2
TVP23B-201ENST00000307767 BCANQ96GW7 911 aa22.53■■□□□ 1.2
TVP23B-201ENST00000307767 ADGRF5Q8IZF2 1346 aa22.52■■□□□ 1.2
TVP23B-201ENST00000307767 TMF1P82094 1093 aa22.52■■□□□ 1.2
TVP23B-201ENST00000307767 MROH2AA6NES4 1674 aa22.52■■□□□ 1.2
TVP23B-201ENST00000307767 MYBBP1AQ9BQG0 1328 aaKnown RBP22.52■■□□□ 1.19
TVP23B-201ENST00000307767 DIP2CQ9Y2E4 1556 aa22.51■■□□□ 1.19
TVP23B-201ENST00000307767 GGT6Q6P531 493 aa22.51■■□□□ 1.19
TVP23B-201ENST00000307767 NRXN1Q9ULB1 1477 aa22.5■■□□□ 1.19
TVP23B-201ENST00000307767 ABCC3O15438 1527 aa22.5■■□□□ 1.19
TVP23B-201ENST00000307767 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
TVP23B-201ENST00000307767 LRPPRCP42704 1394 aaKnown RBP22.5■■□□□ 1.19
TVP23B-201ENST00000307767 KIAA1210Q9ULL0 1709 aa22.5■■□□□ 1.19
TVP23B-201ENST00000307767 GLI2P10070 1586 aa22.5■■□□□ 1.19
TVP23B-201ENST00000307767 IFT172Q9UG01 1749 aa22.49■■□□□ 1.19
TVP23B-201ENST00000307767 ADGRB3O60242 1522 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms