RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
ZNF556-201ENST00000307635 LMOD3Q0VAK6 560 aa13.59□□□□□ -0.23
ZNF556-201ENST00000307635 HDAC5Q9UQL6 1122 aa13.58□□□□□ -0.24
ZNF556-201ENST00000307635 AFAP1Q8N556 730 aa13.58□□□□□ -0.24
ZNF556-201ENST00000307635 CDK11BP21127 795 aaKnown RBP13.57□□□□□ -0.24
ZNF556-201ENST00000307635 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
ZNF556-201ENST00000307635 MINK1Q8N4C8 1332 aaPredicted RBP13.56□□□□□ -0.24
ZNF556-201ENST00000307635 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
ZNF556-201ENST00000307635 RAB3GAP2Q9H2M9 1393 aa13.56□□□□□ -0.24
ZNF556-201ENST00000307635 TAF7LQ5H9L4 462 aa13.56□□□□□ -0.24
ZNF556-201ENST00000307635 EHBP1L1Q8N3D4 1523 aa13.56□□□□□ -0.24
ZNF556-201ENST00000307635 RAPGEF3O95398 923 aa13.55□□□□□ -0.24
ZNF556-201ENST00000307635 TROQ12816 1431 aaPredicted RBP13.55□□□□□ -0.24
ZNF556-201ENST00000307635 NUTM2BA6NNL0 878 aaPredicted RBP13.55□□□□□ -0.24
ZNF556-201ENST00000307635 NUTM2EB1AL46 878 aaPredicted RBP13.55□□□□□ -0.24
ZNF556-201ENST00000307635 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
ZNF556-201ENST00000307635 NUTM2AQ8IVF1 878 aaPredicted RBP13.55□□□□□ -0.24
ZNF556-201ENST00000307635 U2AF1L5P0DN76 240 aaPredicted RBP13.54□□□□□ -0.24
ZNF556-201ENST00000307635 U2AF1Q01081 240 aaKnown RBP eCLIP13.54□□□□□ -0.24
ZNF556-201ENST00000307635 PEG3Q9GZU2 1588 aa13.54□□□□□ -0.24
ZNF556-201ENST00000307635 STK31Q9BXU1 1019 aa13.54□□□□□ -0.24
ZNF556-201ENST00000307635 RRBP1Q9P2E9 1410 aaKnown RBP13.53□□□□□ -0.24
ZNF556-201ENST00000307635 MIA2Q96PC5 1412 aa13.53□□□□□ -0.24
ZNF556-201ENST00000307635 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
ZNF556-201ENST00000307635 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
ZNF556-201ENST00000307635 SYTL4Q96C24 671 aaPredicted RBP13.53□□□□□ -0.24
ZNF556-201ENST00000307635 SLC52A1Q9NWF4 448 aa13.52□□□□□ -0.25
ZNF556-201ENST00000307635 CCDC136Q96JN2 1154 aa13.52□□□□□ -0.25
ZNF556-201ENST00000307635 ISY1Q9ULR0 285 aaKnown RBP13.51□□□□□ -0.25
ZNF556-201ENST00000307635 KIF14Q15058 1648 aa13.51□□□□□ -0.25
ZNF556-201ENST00000307635 DENND4BO75064 1496 aaPredicted RBP13.51□□□□□ -0.25
ZNF556-201ENST00000307635 NCOA2Q15596 1464 aa13.5□□□□□ -0.25
ZNF556-201ENST00000307635 CGNL1Q0VF96 1302 aa13.49□□□□□ -0.25
ZNF556-201ENST00000307635 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
ZNF556-201ENST00000307635 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
ZNF556-201ENST00000307635 ADGRL1O94910 1474 aa13.49□□□□□ -0.25
ZNF556-201ENST00000307635 HSPA5P11021 654 aaKnown RBP13.49□□□□□ -0.25
ZNF556-201ENST00000307635 RAPGEF4Q8WZA2 1011 aa13.49□□□□□ -0.25
ZNF556-201ENST00000307635 EPRSP07814 1512 aaKnown RBP13.49□□□□□ -0.25
ZNF556-201ENST00000307635 FGD6Q6ZV73 1430 aa13.48□□□□□ -0.25
ZNF556-201ENST00000307635 IPO8O15397 1037 aaKnown RBP13.47□□□□□ -0.25
ZNF556-201ENST00000307635 RALBP1Q15311 655 aa13.47□□□□□ -0.25
ZNF556-201ENST00000307635 ZNF608Q9ULD9 1512 aaPredicted RBP13.47□□□□□ -0.25
ZNF556-201ENST00000307635 PHLDB1Q86UU1 1377 aa13.47□□□□□ -0.25
ZNF556-201ENST00000307635 CHMP3Q9Y3E7 222 aa13.47□□□□□ -0.25
ZNF556-201ENST00000307635 C9orf84Q5VXU9 1444 aa13.46□□□□□ -0.25
ZNF556-201ENST00000307635 FRAT1Q92837 279 aaPredicted RBP13.46□□□□□ -0.25
ZNF556-201ENST00000307635 GORABQ5T7V8 394 aa13.46□□□□□ -0.26
ZNF556-201ENST00000307635 TEFQ10587 303 aa13.46□□□□□ -0.26
ZNF556-201ENST00000307635 SMG6Q86US8 1419 aaKnown RBP13.45□□□□□ -0.26
ZNF556-201ENST00000307635 ZNF644Q9H582 1327 aaPredicted RBP13.44□□□□□ -0.26
ZNF556-201ENST00000307635 KCNJ4P48050 445 aa13.44□□□□□ -0.26
ZNF556-201ENST00000307635 ANP32BQ92688 251 aaKnown RBP13.44□□□□□ -0.26
ZNF556-201ENST00000307635 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
ZNF556-201ENST00000307635 FGD1P98174 961 aa13.43□□□□□ -0.26
ZNF556-201ENST00000307635 NLRP2Q9NX02 1062 aa13.43□□□□□ -0.26
ZNF556-201ENST00000307635 CENPJQ9HC77 1338 aaPredicted RBP13.43□□□□□ -0.26
ZNF556-201ENST00000307635 TOM1O60784 492 aa13.43□□□□□ -0.26
ZNF556-201ENST00000307635 FRAT2O75474 233 aaPredicted RBP13.42□□□□□ -0.26
ZNF556-201ENST00000307635 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
ZNF556-201ENST00000307635 L3MBTL2Q969R5 705 aa13.41□□□□□ -0.26
ZNF556-201ENST00000307635 RPGRIP1LQ68CZ1 1315 aa13.41□□□□□ -0.26
ZNF556-201ENST00000307635 STRN4Q9NRL3 753 aa13.4□□□□□ -0.26
ZNF556-201ENST00000307635 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
ZNF556-201ENST00000307635 GPATCH3Q96I76 525 aa13.4□□□□□ -0.26
ZNF556-201ENST00000307635 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
ZNF556-201ENST00000307635 PDE3BQ13370 1112 aa13.4□□□□□ -0.27
ZNF556-201ENST00000307635 FKBP8Q14318 412 aa13.39□□□□□ -0.27
ZNF556-201ENST00000307635 LRPPRCP42704 1394 aaKnown RBP13.39□□□□□ -0.27
ZNF556-201ENST00000307635 NLRP6P59044 892 aa13.38□□□□□ -0.27
ZNF556-201ENST00000307635 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
ZNF556-201ENST00000307635 FANCAO15360 1455 aa13.38□□□□□ -0.27
ZNF556-201ENST00000307635 NCLP19338 710 aaKnown RBP13.38□□□□□ -0.27
ZNF556-201ENST00000307635 WDR62O43379 1518 aa13.38□□□□□ -0.27
ZNF556-201ENST00000307635 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
ZNF556-201ENST00000307635 CCDC141Q6ZP82 1450 aa13.37□□□□□ -0.27
ZNF556-201ENST00000307635 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
ZNF556-201ENST00000307635 TULP1O00294 542 aaPredicted RBP13.37□□□□□ -0.27
ZNF556-201ENST00000307635 NOL10Q9BSC4 688 aaKnown RBP13.36□□□□□ -0.27
ZNF556-201ENST00000307635 UBAP1LF5GYI3 381 aa13.36□□□□□ -0.27
ZNF556-201ENST00000307635 HFM1A2PYH4 1435 aa13.35□□□□□ -0.27
ZNF556-201ENST00000307635 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
ZNF556-201ENST00000307635 NAP1L2Q9ULW6 460 aaPredicted RBP13.35□□□□□ -0.27
ZNF556-201ENST00000307635 ARHGEF11O15085 1522 aa13.35□□□□□ -0.27
ZNF556-201ENST00000307635 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
ZNF556-201ENST00000307635 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
ZNF556-201ENST00000307635 NEXNQ0ZGT2 675 aa13.34□□□□□ -0.27
ZNF556-201ENST00000307635 TOM1L2Q6ZVM7 507 aa13.34□□□□□ -0.27
ZNF556-201ENST00000307635 HSP90B1P14625 803 aaKnown RBP13.34□□□□□ -0.27
ZNF556-201ENST00000307635 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
ZNF556-201ENST00000307635 TATP17735 454 aaPredicted RBP13.33□□□□□ -0.27
ZNF556-201ENST00000307635 SLC26A8Q96RN1 970 aa13.33□□□□□ -0.27
ZNF556-201ENST00000307635 USP35Q9P2H5 1018 aa13.33□□□□□ -0.28
ZNF556-201ENST00000307635 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
ZNF556-201ENST00000307635 MCCP23508 829 aa13.33□□□□□ -0.28
ZNF556-201ENST00000307635 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
ZNF556-201ENST00000307635 FAM135AQ9P2D6 1515 aa13.32□□□□□ -0.28
ZNF556-201ENST00000307635 DDX58O95786 925 aaKnown RBP13.32□□□□□ -0.28
ZNF556-201ENST00000307635 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
ZNF556-201ENST00000307635 CDK13Q14004 1512 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms