RNA–Protein interactions for RNA: ENST00000306006.10

ZNF239-201, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-201ENST00000306006 CCDC144AA2RUR9 1427 aa13.39□□□□□ -0.27
ZNF239-201ENST00000306006 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
ZNF239-201ENST00000306006 DEPDC5O75140 1603 aa13.39□□□□□ -0.27
ZNF239-201ENST00000306006 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
ZNF239-201ENST00000306006 ZNF326Q5BKZ1 582 aaKnown RBP13.38□□□□□ -0.27
ZNF239-201ENST00000306006 KDM5CP41229 1560 aa13.38□□□□□ -0.27
ZNF239-201ENST00000306006 NEO1Q92859 1461 aa13.37□□□□□ -0.27
ZNF239-201ENST00000306006 UHRF1BP1Q6BDS2 1440 aa13.37□□□□□ -0.27
ZNF239-201ENST00000306006 KIF3BO15066 747 aa13.37□□□□□ -0.27
ZNF239-201ENST00000306006 YTHDC1Q96MU7 727 aaKnown RBP13.37□□□□□ -0.27
ZNF239-201ENST00000306006 ATP10AO60312 1499 aa13.36□□□□□ -0.27
ZNF239-201ENST00000306006 EIF2AK4Q9P2K8 1649 aaKnown RBP13.36□□□□□ -0.27
ZNF239-201ENST00000306006 MAP3K4Q9Y6R4 1608 aa13.36□□□□□ -0.27
ZNF239-201ENST00000306006 SPATA31E1Q6ZUB1 1445 aa13.35□□□□□ -0.27
ZNF239-201ENST00000306006 DCAF11Q8TEB1 546 aa13.35□□□□□ -0.27
ZNF239-201ENST00000306006 KDM2AQ9Y2K7 1162 aa13.35□□□□□ -0.27
ZNF239-201ENST00000306006 E9PCH4 1651 aa13.35□□□□□ -0.27
ZNF239-201ENST00000306006 GLI2P10070 1586 aa13.35□□□□□ -0.27
ZNF239-201ENST00000306006 VWDEQ8N2E2 1590 aa13.35□□□□□ -0.27
ZNF239-201ENST00000306006 MLH3Q9UHC1 1453 aa13.35□□□□□ -0.27
ZNF239-201ENST00000306006 WASHC2AQ641Q2 1341 aa13.34□□□□□ -0.27
ZNF239-201ENST00000306006 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
ZNF239-201ENST00000306006 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
ZNF239-201ENST00000306006 HECW2Q9P2P5 1572 aa13.33□□□□□ -0.28
ZNF239-201ENST00000306006 A2MP01023 1474 aa13.33□□□□□ -0.28
ZNF239-201ENST00000306006 KANK1Q14678 1352 aa13.33□□□□□ -0.28
ZNF239-201ENST00000306006 RAPGEF3O95398 923 aa13.33□□□□□ -0.28
ZNF239-201ENST00000306006 PRDM15P57071 1507 aaPredicted RBP13.33□□□□□ -0.28
ZNF239-201ENST00000306006 TET3O43151 1660 aa13.33□□□□□ -0.28
ZNF239-201ENST00000306006 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
ZNF239-201ENST00000306006 RGL3Q3MIN7 710 aa13.32□□□□□ -0.28
ZNF239-201ENST00000306006 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
ZNF239-201ENST00000306006 C11orf95C9JLR9 678 aaPredicted RBP13.32□□□□□ -0.28
ZNF239-201ENST00000306006 FAM69CQ0P6D2 419 aa13.31□□□□□ -0.28
ZNF239-201ENST00000306006 FRMPD1Q5SYB0 1578 aa13.31□□□□□ -0.28
ZNF239-201ENST00000306006 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
ZNF239-201ENST00000306006 PTPRTO14522 1441 aa13.3□□□□□ -0.28
ZNF239-201ENST00000306006 ABCA6Q8N139 1617 aa13.3□□□□□ -0.28
ZNF239-201ENST00000306006 USP47Q96K76 1375 aa13.3□□□□□ -0.28
ZNF239-201ENST00000306006 TRPM2O94759 1503 aa13.29□□□□□ -0.28
ZNF239-201ENST00000306006 SPHKAPQ2M3C7 1700 aa13.29□□□□□ -0.28
ZNF239-201ENST00000306006 CCDC7Q96M83 1385 aa13.29□□□□□ -0.28
ZNF239-201ENST00000306006 PRAG1Q86YV5 1406 aa13.29□□□□□ -0.28
ZNF239-201ENST00000306006 RICTORQ6R327 1708 aa13.28□□□□□ -0.28
ZNF239-201ENST00000306006 RNF17Q9BXT8 1623 aaKnown RBP13.28□□□□□ -0.28
ZNF239-201ENST00000306006 CARD11Q9BXL7 1154 aa13.28□□□□□ -0.28
ZNF239-201ENST00000306006 ANP32CO43423 234 aa13.27□□□□□ -0.29
ZNF239-201ENST00000306006 CLTCL1P53675 1640 aa13.26□□□□□ -0.29
ZNF239-201ENST00000306006 TRPM1Q7Z4N2 1603 aa13.26□□□□□ -0.29
ZNF239-201ENST00000306006 KIF7Q2M1P5 1343 aa13.26□□□□□ -0.29
ZNF239-201ENST00000306006 DIP2CQ9Y2E4 1556 aa13.25□□□□□ -0.29
ZNF239-201ENST00000306006 EFCAB6Q5THR3 1501 aa13.25□□□□□ -0.29
ZNF239-201ENST00000306006 LMTK2Q8IWU2 1503 aa13.25□□□□□ -0.29
ZNF239-201ENST00000306006 CEP152O94986 1710 aa13.25□□□□□ -0.29
ZNF239-201ENST00000306006 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
ZNF239-201ENST00000306006 BCORL1Q5H9F3 1711 aa13.25□□□□□ -0.29
ZNF239-201ENST00000306006 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
ZNF239-201ENST00000306006 GGT6Q6P531 493 aa13.24□□□□□ -0.29
ZNF239-201ENST00000306006 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
ZNF239-201ENST00000306006 TSPOAP1O95153 1857 aa13.24□□□□□ -0.29
ZNF239-201ENST00000306006 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
ZNF239-201ENST00000306006 YEATS2Q9ULM3 1422 aa13.23□□□□□ -0.29
ZNF239-201ENST00000306006 NBPF1Q3BBV0 1214 aa13.22□□□□□ -0.29
ZNF239-201ENST00000306006 CCER2I3L3R5 266 aa13.21□□□□□ -0.29
ZNF239-201ENST00000306006 UGGT1Q9NYU2 1555 aa13.21□□□□□ -0.3
ZNF239-201ENST00000306006 GPRASP1Q5JY77 1395 aa13.21□□□□□ -0.3
ZNF239-201ENST00000306006 ST20-MTHFSA0A0A6YYL1 179 aa13.21□□□□□ -0.3
ZNF239-201ENST00000306006 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
ZNF239-201ENST00000306006 ABCC3O15438 1527 aa13.19□□□□□ -0.3
ZNF239-201ENST00000306006 ZMYM4Q5VZL5 1548 aa13.19□□□□□ -0.3
ZNF239-201ENST00000306006 MYT1Q01538 1121 aa13.19□□□□□ -0.3
ZNF239-201ENST00000306006 NPATQ14207 1427 aa13.19□□□□□ -0.3
ZNF239-201ENST00000306006 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
ZNF239-201ENST00000306006 KIF13AQ9H1H9 1805 aa13.18□□□□□ -0.3
ZNF239-201ENST00000306006 LAMC1P11047 1609 aa13.18□□□□□ -0.3
ZNF239-201ENST00000306006 MADDQ8WXG6 1647 aa13.18□□□□□ -0.3
ZNF239-201ENST00000306006 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
ZNF239-201ENST00000306006 NEURL4Q96JN8 1562 aa13.17□□□□□ -0.3
ZNF239-201ENST00000306006 CAMSAP1Q5T5Y3 1602 aa13.16□□□□□ -0.3
ZNF239-201ENST00000306006 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
ZNF239-201ENST00000306006 POLR3GLQ9BT43 218 aa13.16□□□□□ -0.3
ZNF239-201ENST00000306006 KIF1BO60333 1816 aa13.16□□□□□ -0.3
ZNF239-201ENST00000306006 CFAP65Q6ZU64 1925 aaKnown RBP13.16□□□□□ -0.3
ZNF239-201ENST00000306006 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
ZNF239-201ENST00000306006 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
ZNF239-201ENST00000306006 PRKRIP1Q9H875 184 aaPredicted RBP13.12□□□□□ -0.31
ZNF239-201ENST00000306006 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
ZNF239-201ENST00000306006 NOS1P29475 1434 aa13.12□□□□□ -0.31
ZNF239-201ENST00000306006 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
ZNF239-201ENST00000306006 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
ZNF239-201ENST00000306006 TESK2Q96S53 571 aa13.11□□□□□ -0.31
ZNF239-201ENST00000306006 MYOM2P54296 1465 aa13.11□□□□□ -0.31
ZNF239-201ENST00000306006 ARHGAP31Q2M1Z3 1444 aa13.11□□□□□ -0.31
ZNF239-201ENST00000306006 IFT172Q9UG01 1749 aa13.11□□□□□ -0.31
ZNF239-201ENST00000306006 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
ZNF239-201ENST00000306006 ADGRF5Q8IZF2 1346 aa13.1□□□□□ -0.31
ZNF239-201ENST00000306006 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
ZNF239-201ENST00000306006 REREQ9P2R6 1566 aa13.09□□□□□ -0.31
ZNF239-201ENST00000306006 SYNMO15061 1565 aa13.09□□□□□ -0.31
ZNF239-201ENST00000306006 IQGAP1P46940 1657 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms