RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CCDC144AA2RUR9 1427 aa9.2□□□□□ -0.94
USP47-201ENST00000305481 ATP10AO60312 1499 aa9.19□□□□□ -0.94
USP47-201ENST00000305481 DCAF11Q8TEB1 546 aa9.19□□□□□ -0.94
USP47-201ENST00000305481 CCDC7Q96M83 1385 aa9.19□□□□□ -0.94
USP47-201ENST00000305481 CD109Q6YHK3 1445 aa9.19□□□□□ -0.94
USP47-201ENST00000305481 GTF3C3Q9Y5Q9 886 aa9.19□□□□□ -0.94
USP47-201ENST00000305481 DEPDC5O75140 1603 aa9.18□□□□□ -0.94
USP47-201ENST00000305481 RALGAPBQ86X10 1494 aa9.18□□□□□ -0.94
USP47-201ENST00000305481 KDM2AQ9Y2K7 1162 aa9.18□□□□□ -0.94
USP47-201ENST00000305481 ANP32CO43423 234 aa9.18□□□□□ -0.94
USP47-201ENST00000305481 KDM5CP41229 1560 aa9.17□□□□□ -0.94
USP47-201ENST00000305481 KIDINS220Q9ULH0 1771 aa9.17□□□□□ -0.94
USP47-201ENST00000305481 USP47Q96K76 1375 aa9.17□□□□□ -0.94
USP47-201ENST00000305481 DHX29Q7Z478 1369 aaKnown RBP9.17□□□□□ -0.94
USP47-201ENST00000305481 KIF7Q2M1P5 1343 aa9.17□□□□□ -0.94
USP47-201ENST00000305481 CCER2I3L3R5 266 aa9.17□□□□□ -0.94
USP47-201ENST00000305481 E9PCH4 1651 aa9.16□□□□□ -0.94
USP47-201ENST00000305481 ZNF518AQ6AHZ1 1483 aa9.16□□□□□ -0.94
USP47-201ENST00000305481 VWDEQ8N2E2 1590 aa9.16□□□□□ -0.94
USP47-201ENST00000305481 BCORL1Q5H9F3 1711 aa9.16□□□□□ -0.94
USP47-201ENST00000305481 A2MP01023 1474 aa9.16□□□□□ -0.94
USP47-201ENST00000305481 RGL3Q3MIN7 710 aa9.16□□□□□ -0.94
USP47-201ENST00000305481 MROH1Q8NDA8 1641 aa9.16□□□□□ -0.94
USP47-201ENST00000305481 CYB5RLQ6IPT4 315 aa9.16□□□□□ -0.94
USP47-201ENST00000305481 CNTLNQ9NXG0 1405 aa9.16□□□□□ -0.94
USP47-201ENST00000305481 POLR1AO95602 1720 aaPredicted RBP9.15□□□□□ -0.94
USP47-201ENST00000305481 PRAG1Q86YV5 1406 aa9.15□□□□□ -0.94
USP47-201ENST00000305481 KIF3BO15066 747 aa9.15□□□□□ -0.94
USP47-201ENST00000305481 POGZQ7Z3K3 1410 aa9.15□□□□□ -0.94
USP47-201ENST00000305481 MYT1LQ9UL68 1186 aa9.14□□□□□ -0.95
USP47-201ENST00000305481 EIF2AK4Q9P2K8 1649 aaKnown RBP9.14□□□□□ -0.95
USP47-201ENST00000305481 PRKCSHP14314 528 aaPredicted RBP9.14□□□□□ -0.95
USP47-201ENST00000305481 CARD11Q9BXL7 1154 aa9.14□□□□□ -0.95
USP47-201ENST00000305481 CFAP74Q9C0B2 1584 aa9.14□□□□□ -0.95
USP47-201ENST00000305481 PTPRTO14522 1441 aa9.14□□□□□ -0.95
USP47-201ENST00000305481 RIMBP3CA6NJZ7 1639 aa9.14□□□□□ -0.95
USP47-201ENST00000305481 RIMBP3BA6NNM3 1639 aa9.14□□□□□ -0.95
USP47-201ENST00000305481 RIMBP3Q9UFD9 1639 aa9.14□□□□□ -0.95
USP47-201ENST00000305481 PRDM15P57071 1507 aaPredicted RBP9.13□□□□□ -0.95
USP47-201ENST00000305481 TRPM1Q7Z4N2 1603 aa9.13□□□□□ -0.95
USP47-201ENST00000305481 TET3O43151 1660 aa9.13□□□□□ -0.95
USP47-201ENST00000305481 MYT1Q01538 1121 aa9.13□□□□□ -0.95
USP47-201ENST00000305481 MLH3Q9UHC1 1453 aa9.13□□□□□ -0.95
USP47-201ENST00000305481 TRPM2O94759 1503 aa9.12□□□□□ -0.95
USP47-201ENST00000305481 NBPF1Q3BBV0 1214 aa9.12□□□□□ -0.95
USP47-201ENST00000305481 FRMPD1Q5SYB0 1578 aa9.12□□□□□ -0.95
USP47-201ENST00000305481 ROCK2O75116 1388 aaKnown RBP9.11□□□□□ -0.95
USP47-201ENST00000305481 NEO1Q92859 1461 aa9.11□□□□□ -0.95
USP47-201ENST00000305481 SPHKAPQ2M3C7 1700 aa9.11□□□□□ -0.95
USP47-201ENST00000305481 KANK1Q14678 1352 aa9.11□□□□□ -0.95
USP47-201ENST00000305481 ST20-MTHFSA0A0A6YYL1 179 aa9.11□□□□□ -0.95
USP47-201ENST00000305481 RAPGEF3O95398 923 aa9.11□□□□□ -0.95
USP47-201ENST00000305481 MAP3K4Q9Y6R4 1608 aa9.11□□□□□ -0.95
USP47-201ENST00000305481 CLTCL1P53675 1640 aa9.11□□□□□ -0.95
USP47-201ENST00000305481 GPRASP1Q5JY77 1395 aa9.1□□□□□ -0.95
USP47-201ENST00000305481 HECW2Q9P2P5 1572 aa9.1□□□□□ -0.95
USP47-201ENST00000305481 ABCA6Q8N139 1617 aa9.09□□□□□ -0.95
USP47-201ENST00000305481 RNF17Q9BXT8 1623 aaKnown RBP9.09□□□□□ -0.95
USP47-201ENST00000305481 ARID4BQ4LE39 1312 aaPredicted RBP9.09□□□□□ -0.95
USP47-201ENST00000305481 PRKRIP1Q9H875 184 aaPredicted RBP9.09□□□□□ -0.95
USP47-201ENST00000305481 GLI2P10070 1586 aa9.09□□□□□ -0.95
USP47-201ENST00000305481 CEP152O94986 1710 aa9.09□□□□□ -0.95
USP47-201ENST00000305481 CCDC184Q52MB2 194 aa9.08□□□□□ -0.96
USP47-201ENST00000305481 PPRC1Q5VV67 1664 aaKnown RBP9.08□□□□□ -0.96
USP47-201ENST00000305481 EFCAB6Q5THR3 1501 aa9.08□□□□□ -0.96
USP47-201ENST00000305481 LMTK2Q8IWU2 1503 aa9.08□□□□□ -0.96
USP47-201ENST00000305481 UGGT1Q9NYU2 1555 aa9.07□□□□□ -0.96
USP47-201ENST00000305481 LAMC1P11047 1609 aa9.07□□□□□ -0.96
USP47-201ENST00000305481 RICTORQ6R327 1708 aa9.07□□□□□ -0.96
USP47-201ENST00000305481 MADDQ8WXG6 1647 aa9.06□□□□□ -0.96
USP47-201ENST00000305481 POLR3GLQ9BT43 218 aa9.06□□□□□ -0.96
USP47-201ENST00000305481 DIP2CQ9Y2E4 1556 aa9.06□□□□□ -0.96
USP47-201ENST00000305481 GGT6Q6P531 493 aa9.06□□□□□ -0.96
USP47-201ENST00000305481 FAM69CQ0P6D2 419 aa9.05□□□□□ -0.96
USP47-201ENST00000305481 DIP2BQ9P265 1576 aa9.05□□□□□ -0.96
USP47-201ENST00000305481 NEURL4Q96JN8 1562 aa9.05□□□□□ -0.96
USP47-201ENST00000305481 TESK2Q96S53 571 aa9.05□□□□□ -0.96
USP47-201ENST00000305481 NPATQ14207 1427 aa9.04□□□□□ -0.96
USP47-201ENST00000305481 YEATS2Q9ULM3 1422 aa9.04□□□□□ -0.96
USP47-201ENST00000305481 ABCC3O15438 1527 aa9.03□□□□□ -0.96
USP47-201ENST00000305481 STAC3Q96MF2 364 aa9.03□□□□□ -0.96
USP47-201ENST00000305481 DISP3Q9P2K9 1392 aa9.02□□□□□ -0.97
USP47-201ENST00000305481 WASHC2CQ9Y4E1 1318 aa9.02□□□□□ -0.97
USP47-201ENST00000305481 MROH2AA6NES4 1674 aa9.02□□□□□ -0.97
USP47-201ENST00000305481 COL17A1Q9UMD9 1497 aaPredicted RBP9.01□□□□□ -0.97
USP47-201ENST00000305481 KIF1BO60333 1816 aa9.01□□□□□ -0.97
USP47-201ENST00000305481 ADGRF5Q8IZF2 1346 aa9.01□□□□□ -0.97
USP47-201ENST00000305481 IQGAP1P46940 1657 aa9.01□□□□□ -0.97
USP47-201ENST00000305481 MRS2Q9HD23 443 aa9.01□□□□□ -0.97
USP47-201ENST00000305481 IFT172Q9UG01 1749 aa9□□□□□ -0.97
USP47-201ENST00000305481 CFAP65Q6ZU64 1925 aaKnown RBP9□□□□□ -0.97
USP47-201ENST00000305481 SIGLEC1Q9BZZ2 1709 aa9□□□□□ -0.97
USP47-201ENST00000305481 CAMSAP1Q5T5Y3 1602 aa9□□□□□ -0.97
USP47-201ENST00000305481 ZMYM4Q5VZL5 1548 aa9□□□□□ -0.97
USP47-201ENST00000305481 MYOM2P54296 1465 aa9□□□□□ -0.97
USP47-201ENST00000305481 TSPOAP1O95153 1857 aa9□□□□□ -0.97
USP47-201ENST00000305481 ADGRB3O60242 1522 aa9□□□□□ -0.97
USP47-201ENST00000305481 CNGB1Q14028 1251 aaPredicted RBP9□□□□□ -0.97
USP47-201ENST00000305481 NOS1P29475 1434 aa8.99□□□□□ -0.97
USP47-201ENST00000305481 NRXN1Q9ULB1 1477 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms