RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 PTGDRQ13258 359 aa10.71□□□□□ -0.69
CSN3-201ENST00000304954 C6orf132Q5T0Z8 1188 aa10.71□□□□□ -0.69
CSN3-201ENST00000304954 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
CSN3-201ENST00000304954 RBM27Q9P2N5 1060 aaKnown RBP10.7□□□□□ -0.7
CSN3-201ENST00000304954 MINK1Q8N4C8 1332 aaPredicted RBP10.68□□□□□ -0.7
CSN3-201ENST00000304954 ADAM33Q9BZ11 813 aa10.68□□□□□ -0.7
CSN3-201ENST00000304954 GPR37O15354 613 aa10.67□□□□□ -0.7
CSN3-201ENST00000304954 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
CSN3-201ENST00000304954 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
CSN3-201ENST00000304954 PBX2P40425 430 aa10.66□□□□□ -0.7
CSN3-201ENST00000304954 MAP2K5Q13163 448 aa10.66□□□□□ -0.7
CSN3-201ENST00000304954 AK7Q96M32 723 aa10.66□□□□□ -0.7
CSN3-201ENST00000304954 PPP1R3GB7ZBB8 358 aa10.65□□□□□ -0.7
CSN3-201ENST00000304954 TSR1Q2NL82 804 aaKnown RBP10.65□□□□□ -0.7
CSN3-201ENST00000304954 VARS2Q5ST30 1063 aaKnown RBP10.64□□□□□ -0.71
CSN3-201ENST00000304954 CDHR5Q9HBB8 845 aa10.64□□□□□ -0.71
CSN3-201ENST00000304954 NPDC1Q9NQX5 325 aaPredicted RBP10.63□□□□□ -0.71
CSN3-201ENST00000304954 SLC24A3Q9HC58 644 aa10.62□□□□□ -0.71
CSN3-201ENST00000304954 ZNF687Q8N1G0 1237 aa10.61□□□□□ -0.71
CSN3-201ENST00000304954 FAM205CA6NFA0 338 aa10.6□□□□□ -0.71
CSN3-201ENST00000304954 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
CSN3-201ENST00000304954 IRF6O14896 467 aa10.6□□□□□ -0.71
CSN3-201ENST00000304954 ONECUT3O60422 494 aaPredicted RBP10.6□□□□□ -0.71
CSN3-201ENST00000304954 PRSS12P56730 875 aa10.6□□□□□ -0.71
CSN3-201ENST00000304954 MARVELD3Q96A59 401 aa10.6□□□□□ -0.71
CSN3-201ENST00000304954 POTEMA6NI47 508 aa10.58□□□□□ -0.72
CSN3-201ENST00000304954 OATP04181 439 aa10.58□□□□□ -0.72
CSN3-201ENST00000304954 CDCA7LQ96GN5 454 aa10.58□□□□□ -0.72
CSN3-201ENST00000304954 KCNK17Q96T54 332 aa10.58□□□□□ -0.72
CSN3-201ENST00000304954 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
CSN3-201ENST00000304954 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
CSN3-201ENST00000304954 PACS2Q86VP3 889 aa10.56□□□□□ -0.72
CSN3-201ENST00000304954 HS3ST6Q96QI5 342 aa10.56□□□□□ -0.72
CSN3-201ENST00000304954 SLC4A5Q9BY07 1137 aa10.56□□□□□ -0.72
CSN3-201ENST00000304954 PADI6Q6TGC4 694 aa10.55□□□□□ -0.72
CSN3-201ENST00000304954 TTC13Q8NBP0 860 aa10.55□□□□□ -0.72
CSN3-201ENST00000304954 CCDC102AQ96A19 550 aa10.55□□□□□ -0.72
CSN3-201ENST00000304954 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
CSN3-201ENST00000304954 COL9A1P20849 921 aa10.54□□□□□ -0.72
CSN3-201ENST00000304954 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
CSN3-201ENST00000304954 TRIM6-TRIM34B2RNG4 842 aa10.53□□□□□ -0.72
CSN3-201ENST00000304954 TRIM66O15016 1216 aa10.52□□□□□ -0.73
CSN3-201ENST00000304954 FECHP22830 423 aa10.52□□□□□ -0.73
CSN3-201ENST00000304954 ZBED2Q9BTP6 218 aa10.51□□□□□ -0.73
CSN3-201ENST00000304954 TK2O00142 265 aa10.5□□□□□ -0.73
CSN3-201ENST00000304954 AMHR2Q16671 573 aa10.5□□□□□ -0.73
CSN3-201ENST00000304954 RABGEF1Q9UJ41 708 aa10.49□□□□□ -0.73
CSN3-201ENST00000304954 ADGRG1Q9Y653 693 aa10.49□□□□□ -0.73
CSN3-201ENST00000304954 PSEN2P49810 448 aa10.48□□□□□ -0.73
CSN3-201ENST00000304954 PDE4DQ08499 809 aa10.48□□□□□ -0.73
CSN3-201ENST00000304954 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
CSN3-201ENST00000304954 METTL3Q86U44 580 aaKnown RBP10.47□□□□□ -0.73
CSN3-201ENST00000304954 NBPF3Q9H094 633 aa10.47□□□□□ -0.73
CSN3-201ENST00000304954 TSKSQ9UJT2 592 aa10.47□□□□□ -0.73
CSN3-201ENST00000304954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.46□□□□□ -0.73
CSN3-201ENST00000304954 CLCN1P35523 988 aa10.46□□□□□ -0.73
CSN3-201ENST00000304954 PXYLP1Q8TE99 480 aa10.46□□□□□ -0.73
CSN3-201ENST00000304954 TATDN2Q93075 761 aa10.46□□□□□ -0.73
CSN3-201ENST00000304954 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
CSN3-201ENST00000304954 BRPF1P55201 1214 aaPredicted RBP10.44□□□□□ -0.74
CSN3-201ENST00000304954 TTLL12Q14166 644 aaPredicted RBP10.44□□□□□ -0.74
CSN3-201ENST00000304954 POTEEQ6S8J3 1075 aa10.44□□□□□ -0.74
CSN3-201ENST00000304954 AXIN2Q9Y2T1 843 aa10.44□□□□□ -0.74
CSN3-201ENST00000304954 DNAJB2P25686 324 aa10.43□□□□□ -0.74
CSN3-201ENST00000304954 SLC4A3P48751 1232 aa10.43□□□□□ -0.74
CSN3-201ENST00000304954 HDGFP51858 240 aaKnown RBP10.43□□□□□ -0.74
CSN3-201ENST00000304954 LSM11P83369 360 aaKnown RBP eCLIP10.43□□□□□ -0.74
CSN3-201ENST00000304954 PROX2Q3B8N5 592 aa10.43□□□□□ -0.74
CSN3-201ENST00000304954 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
CSN3-201ENST00000304954 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
CSN3-201ENST00000304954 LAPTM4BQ86VI4 370 aa10.43□□□□□ -0.74
CSN3-201ENST00000304954 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
CSN3-201ENST00000304954 KIAA1468Q9P260 1216 aa10.43□□□□□ -0.74
CSN3-201ENST00000304954 VPS9D1Q9Y2B5 631 aa10.43□□□□□ -0.74
CSN3-201ENST00000304954 EYA1Q99502 592 aa10.42□□□□□ -0.74
CSN3-201ENST00000304954 GPCPD1Q9NPB8 672 aa10.42□□□□□ -0.74
CSN3-201ENST00000304954 PCDH10Q9P2E7 1040 aa10.42□□□□□ -0.74
CSN3-201ENST00000304954 POTEB3A0JP26 581 aa10.41□□□□□ -0.74
CSN3-201ENST00000304954 POTEBQ6S5H4 581 aa10.41□□□□□ -0.74
CSN3-201ENST00000304954 FAM198AQ9UFP1 575 aa10.41□□□□□ -0.74
CSN3-201ENST00000304954 FAM98CQ17RN3 349 aaKnown RBP10.39□□□□□ -0.75
CSN3-201ENST00000304954 RSPH4AQ5TD94 716 aa10.39□□□□□ -0.75
CSN3-201ENST00000304954 ADGRD1Q6QNK2 874 aa10.39□□□□□ -0.75
CSN3-201ENST00000304954 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
CSN3-201ENST00000304954 SULF1Q8IWU6 871 aa10.38□□□□□ -0.75
CSN3-201ENST00000304954 PARP9Q8IXQ6 854 aa10.38□□□□□ -0.75
CSN3-201ENST00000304954 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
CSN3-201ENST00000304954 MDM2Q00987 491 aaPredicted RBP10.37□□□□□ -0.75
CSN3-201ENST00000304954 FAM161AQ3B820 660 aa10.37□□□□□ -0.75
CSN3-201ENST00000304954 MRPL50Q8N5N7 158 aaKnown RBP10.37□□□□□ -0.75
CSN3-201ENST00000304954 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
CSN3-201ENST00000304954 DDRGK1Q96HY6 314 aa10.37□□□□□ -0.75
CSN3-201ENST00000304954 TMEM132AQ24JP5 1023 aa10.36□□□□□ -0.75
CSN3-201ENST00000304954 GIGYF2Q6Y7W6 1299 aaKnown RBP10.36□□□□□ -0.75
CSN3-201ENST00000304954 TMEM134Q9H6X4 195 aa10.36□□□□□ -0.75
CSN3-201ENST00000304954 BHMG1C9JSJ3 638 aaPredicted RBP10.35□□□□□ -0.75
CSN3-201ENST00000304954 ANKRD13DQ6ZTN6 518 aa10.35□□□□□ -0.75
CSN3-201ENST00000304954 PHOX2BQ99453 314 aa10.34□□□□□ -0.75
CSN3-201ENST00000304954 TMUB1Q9BVT8 246 aa10.34□□□□□ -0.75
CSN3-201ENST00000304954 GOLGA8CPA6NN73 597 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms