RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 RALGAPBQ86X10 1494 aa25.66■■□□□ 1.7
RNF139-201ENST00000303545 SENP3-EIF4A1A0A087X0R7 540 aa25.65■■□□□ 1.7
RNF139-201ENST00000303545 EFCAB2Q5VUJ9 269 aa25.65■■□□□ 1.7
RNF139-201ENST00000303545 CCDC144AA2RUR9 1427 aa25.64■■□□□ 1.7
RNF139-201ENST00000303545 PLCH2O75038 1416 aa25.63■■□□□ 1.69
RNF139-201ENST00000303545 ROCK2O75116 1388 aaKnown RBP25.62■■□□□ 1.69
RNF139-201ENST00000303545 TRAPPC8Q9Y2L5 1435 aa25.62■■□□□ 1.69
RNF139-201ENST00000303545 DHX29Q7Z478 1369 aaKnown RBP25.62■■□□□ 1.69
RNF139-201ENST00000303545 MAST1Q9Y2H9 1570 aa25.61■■□□□ 1.69
RNF139-201ENST00000303545 AFAP1Q8N556 730 aa25.61■■□□□ 1.69
RNF139-201ENST00000303545 PLA2R1Q13018 1463 aa25.61■■□□□ 1.69
RNF139-201ENST00000303545 NBPF1Q3BBV0 1214 aa25.6■■□□□ 1.69
RNF139-201ENST00000303545 TSHZ2Q9NRE2 1034 aa25.59■■□□□ 1.69
RNF139-201ENST00000303545 UNC13BO14795 1591 aa25.58■■□□□ 1.69
RNF139-201ENST00000303545 PLXNC1O60486 1568 aa25.56■■□□□ 1.68
RNF139-201ENST00000303545 UHRF1BP1LA0JNW5 1464 aa25.54■■□□□ 1.68
RNF139-201ENST00000303545 DUOX2Q9NRD8 1548 aa25.54■■□□□ 1.68
RNF139-201ENST00000303545 MYT1LQ9UL68 1186 aa25.53■■□□□ 1.68
RNF139-201ENST00000303545 ABCC1P33527 1531 aa25.52■■□□□ 1.68
RNF139-201ENST00000303545 SPAG9O60271 1321 aaKnown RBP25.52■■□□□ 1.68
RNF139-201ENST00000303545 PRAG1Q86YV5 1406 aa25.51■■□□□ 1.68
RNF139-201ENST00000303545 IQGAP3Q86VI3 1631 aa25.51■■□□□ 1.67
RNF139-201ENST00000303545 A2MP01023 1474 aa25.5■■□□□ 1.67
RNF139-201ENST00000303545 ERBINQ96RT1 1412 aa25.47■■□□□ 1.67
RNF139-201ENST00000303545 ARID4BQ4LE39 1312 aaPredicted RBP25.46■■□□□ 1.67
RNF139-201ENST00000303545 TRPM1Q7Z4N2 1603 aa25.46■■□□□ 1.67
RNF139-201ENST00000303545 ZBED9Q6R2W3 1325 aa25.44■■□□□ 1.66
RNF139-201ENST00000303545 WDR7Q9Y4E6 1490 aa25.41■■□□□ 1.66
RNF139-201ENST00000303545 TMC1Q8TDI8 760 aa25.41■■□□□ 1.66
RNF139-201ENST00000303545 MAGI2Q86UL8 1455 aa25.39■■□□□ 1.66
RNF139-201ENST00000303545 FANCAO15360 1455 aa25.38■■□□□ 1.65
RNF139-201ENST00000303545 ZFYVE16Q7Z3T8 1539 aa25.37■■□□□ 1.65
RNF139-201ENST00000303545 KIF3BO15066 747 aa25.35■■□□□ 1.65
RNF139-201ENST00000303545 SCAPERQ9BY12 1400 aa25.35■■□□□ 1.65
RNF139-201ENST00000303545 DISP3Q9P2K9 1392 aa25.34■■□□□ 1.65
RNF139-201ENST00000303545 E9PCH4 1651 aa25.34■■□□□ 1.65
RNF139-201ENST00000303545 PNISRQ8TF01 805 aaKnown RBP25.33■■□□□ 1.65
RNF139-201ENST00000303545 ASXL2Q76L83 1435 aa25.32■■□□□ 1.64
RNF139-201ENST00000303545 TESK2Q96S53 571 aa25.31■■□□□ 1.64
RNF139-201ENST00000303545 ADGRL1O94910 1474 aa25.3■■□□□ 1.64
RNF139-201ENST00000303545 GPRASP1Q5JY77 1395 aa25.3■■□□□ 1.64
RNF139-201ENST00000303545 ATP10AO60312 1499 aa25.3■■□□□ 1.64
RNF139-201ENST00000303545 CC2D1BQ5T0F9 858 aaKnown RBP25.29■■□□□ 1.64
RNF139-201ENST00000303545 RTEL1-TNFRSF6BF6WH68 1400 aa25.29■■□□□ 1.64
RNF139-201ENST00000303545 ATP7AQ04656 1500 aa25.28■■□□□ 1.64
RNF139-201ENST00000303545 MYBBP1AQ9BQG0 1328 aaKnown RBP25.28■■□□□ 1.64
RNF139-201ENST00000303545 SALL2Q9Y467 1007 aaPredicted RBP25.27■■□□□ 1.64
RNF139-201ENST00000303545 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
RNF139-201ENST00000303545 ABCA9Q8IUA7 1624 aa25.27■■□□□ 1.64
RNF139-201ENST00000303545 ARAP3Q8WWN8 1544 aa25.25■■□□□ 1.63
RNF139-201ENST00000303545 PANK3Q9H999 370 aa25.25■■□□□ 1.63
RNF139-201ENST00000303545 RALBP1Q15311 655 aa25.24■■□□□ 1.63
RNF139-201ENST00000303545 COL17A1Q9UMD9 1497 aaPredicted RBP25.23■■□□□ 1.63
RNF139-201ENST00000303545 EIF2AK4Q9P2K8 1649 aaKnown RBP25.22■■□□□ 1.63
RNF139-201ENST00000303545 PER1O15534 1290 aaPredicted RBP25.22■■□□□ 1.63
RNF139-201ENST00000303545 CLTCL1P53675 1640 aa25.22■■□□□ 1.63
RNF139-201ENST00000303545 KTN1Q86UP2 1357 aaKnown RBP25.22■■□□□ 1.63
RNF139-201ENST00000303545 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
RNF139-201ENST00000303545 TMF1P82094 1093 aa25.21■■□□□ 1.63
RNF139-201ENST00000303545 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
RNF139-201ENST00000303545 INO80Q9ULG1 1556 aaPredicted RBP25.21■■□□□ 1.63
RNF139-201ENST00000303545 KANK1Q14678 1352 aa25.21■■□□□ 1.63
RNF139-201ENST00000303545 SPHKAPQ2M3C7 1700 aa25.21■■□□□ 1.63
RNF139-201ENST00000303545 B4GALNT3Q6L9W6 998 aa25.2■■□□□ 1.62
RNF139-201ENST00000303545 TRPM2O94759 1503 aa25.19■■□□□ 1.62
RNF139-201ENST00000303545 UGGT1Q9NYU2 1555 aa25.19■■□□□ 1.62
RNF139-201ENST00000303545 BRD4O60885 1362 aaPredicted RBP25.19■■□□□ 1.62
RNF139-201ENST00000303545 NUDCQ9Y266 331 aa25.17■■□□□ 1.62
RNF139-201ENST00000303545 DEPDC5O75140 1603 aa25.17■■□□□ 1.62
RNF139-201ENST00000303545 LAMC1P11047 1609 aa25.17■■□□□ 1.62
RNF139-201ENST00000303545 PPP4R2Q9NY27 417 aa25.16■■□□□ 1.62
RNF139-201ENST00000303545 MADDQ8WXG6 1647 aa25.16■■□□□ 1.62
RNF139-201ENST00000303545 RBM19Q9Y4C8 960 aaKnown RBP25.16■■□□□ 1.62
RNF139-201ENST00000303545 SMG6Q86US8 1419 aaKnown RBP25.16■■□□□ 1.62
RNF139-201ENST00000303545 PARD3Q8TEW0 1356 aa25.15■■□□□ 1.62
RNF139-201ENST00000303545 PTPRTO14522 1441 aa25.15■■□□□ 1.62
RNF139-201ENST00000303545 TET3O43151 1660 aa25.15■■□□□ 1.62
RNF139-201ENST00000303545 CEP152O94986 1710 aa25.15■■□□□ 1.62
RNF139-201ENST00000303545 NLRP13Q86W25 1043 aa25.14■■□□□ 1.62
RNF139-201ENST00000303545 RNF17Q9BXT8 1623 aaKnown RBP25.13■■□□□ 1.61
RNF139-201ENST00000303545 LRPPRCP42704 1394 aaKnown RBP25.13■■□□□ 1.61
RNF139-201ENST00000303545 CHGAP10645 457 aaKnown RBP25.11■■□□□ 1.61
RNF139-201ENST00000303545 KIDINS220Q9ULH0 1771 aa25.1■■□□□ 1.61
RNF139-201ENST00000303545 MROH1Q8NDA8 1641 aa25.1■■□□□ 1.61
RNF139-201ENST00000303545 CFAP70Q5T0N1 1121 aa25.1■■□□□ 1.61
RNF139-201ENST00000303545 GGT6Q6P531 493 aa25.1■■□□□ 1.61
RNF139-201ENST00000303545 CFAP65Q6ZU64 1925 aaKnown RBP25.1■■□□□ 1.61
RNF139-201ENST00000303545 VWDEQ8N2E2 1590 aa25.08■■□□□ 1.61
RNF139-201ENST00000303545 ADGRF5Q8IZF2 1346 aa25.08■■□□□ 1.6
RNF139-201ENST00000303545 CD109Q6YHK3 1445 aa25.07■■□□□ 1.6
RNF139-201ENST00000303545 ERICH6BQ5W0A0 696 aa25.05■■□□□ 1.6
RNF139-201ENST00000303545 IQGAP1P46940 1657 aa25.05■■□□□ 1.6
RNF139-201ENST00000303545 ZNF518AQ6AHZ1 1483 aa25.03■■□□□ 1.6
RNF139-201ENST00000303545 SCAF11Q99590 1463 aaKnown RBP25.03■■□□□ 1.6
RNF139-201ENST00000303545 RAPGEF3O95398 923 aa25.02■■□□□ 1.6
RNF139-201ENST00000303545 KNSTRNQ9Y448 316 aa25.01■■□□□ 1.59
RNF139-201ENST00000303545 PPRC1Q5VV67 1664 aaKnown RBP25.01■■□□□ 1.59
RNF139-201ENST00000303545 CDCA7LQ96GN5 454 aa24.99■■□□□ 1.59
RNF139-201ENST00000303545 EFCAB6Q5THR3 1501 aa24.98■■□□□ 1.59
RNF139-201ENST00000303545 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms