RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 ANKRD20A12PQ8NF67 263 aa13.4□□□□□ -0.26
MECP2-201ENST00000303391 CAVIN1Q6NZI2 390 aaKnown RBP13.4□□□□□ -0.26
MECP2-201ENST00000303391 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
MECP2-201ENST00000303391 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
MECP2-201ENST00000303391 HSPA5P11021 654 aaKnown RBP13.39□□□□□ -0.27
MECP2-201ENST00000303391 USP8P40818 1118 aa13.39□□□□□ -0.27
MECP2-201ENST00000303391 RUFY1Q96T51 708 aa13.39□□□□□ -0.27
MECP2-201ENST00000303391 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
MECP2-201ENST00000303391 POGKQ9P215 609 aa13.38□□□□□ -0.27
MECP2-201ENST00000303391 RGL3Q3MIN7 710 aa13.38□□□□□ -0.27
MECP2-201ENST00000303391 ROCK1Q13464 1354 aa13.37□□□□□ -0.27
MECP2-201ENST00000303391 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
MECP2-201ENST00000303391 SPAG9O60271 1321 aaKnown RBP13.37□□□□□ -0.27
MECP2-201ENST00000303391 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
MECP2-201ENST00000303391 NASPP49321 788 aaPredicted RBP13.36□□□□□ -0.27
MECP2-201ENST00000303391 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
MECP2-201ENST00000303391 C14orf37Q86TY3 774 aa13.36□□□□□ -0.27
MECP2-201ENST00000303391 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
MECP2-201ENST00000303391 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
MECP2-201ENST00000303391 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
MECP2-201ENST00000303391 CCDC173Q0VFZ6 552 aa13.35□□□□□ -0.27
MECP2-201ENST00000303391 SF3A1Q15459 793 aaKnown RBP13.35□□□□□ -0.27
MECP2-201ENST00000303391 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
MECP2-201ENST00000303391 RRP1P56182 461 aaKnown RBP13.34□□□□□ -0.27
MECP2-201ENST00000303391 MYO6Q9UM54 1294 aa13.34□□□□□ -0.27
MECP2-201ENST00000303391 CLSTN1O94985 981 aa13.34□□□□□ -0.27
MECP2-201ENST00000303391 TPD52L1Q16890 204 aaPredicted RBP13.34□□□□□ -0.27
MECP2-201ENST00000303391 H3BQV1 296 aa13.34□□□□□ -0.27
MECP2-201ENST00000303391 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
MECP2-201ENST00000303391 SMC4Q9NTJ3 1288 aa13.33□□□□□ -0.27
MECP2-201ENST00000303391 KIF7Q2M1P5 1343 aa13.33□□□□□ -0.28
MECP2-201ENST00000303391 LEKR1Q6ZMV7 388 aa13.33□□□□□ -0.28
MECP2-201ENST00000303391 CCAR2Q8N163 923 aaKnown RBP13.33□□□□□ -0.28
MECP2-201ENST00000303391 MBD3O95983 291 aa13.33□□□□□ -0.28
MECP2-201ENST00000303391 MNS1Q8NEH6 495 aa13.33□□□□□ -0.28
MECP2-201ENST00000303391 STK31Q9BXU1 1019 aa13.33□□□□□ -0.28
MECP2-201ENST00000303391 TRIM6-TRIM34B2RNG4 842 aa13.32□□□□□ -0.28
MECP2-201ENST00000303391 TULP1O00294 542 aaPredicted RBP13.32□□□□□ -0.28
MECP2-201ENST00000303391 HOMER1Q86YM7 354 aa13.32□□□□□ -0.28
MECP2-201ENST00000303391 HDGFP51858 240 aaKnown RBP13.32□□□□□ -0.28
MECP2-201ENST00000303391 ZBTB7CA1YPR0 619 aa13.31□□□□□ -0.28
MECP2-201ENST00000303391 PDCL2Q8N4E4 241 aa13.31□□□□□ -0.28
MECP2-201ENST00000303391 DCAF11Q8TEB1 546 aa13.31□□□□□ -0.28
MECP2-201ENST00000303391 E9PSI1 815 aa13.31□□□□□ -0.28
MECP2-201ENST00000303391 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
MECP2-201ENST00000303391 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
MECP2-201ENST00000303391 H0YHG0 523 aa13.3□□□□□ -0.28
MECP2-201ENST00000303391 RUFY2Q8WXA3 655 aa13.3□□□□□ -0.28
MECP2-201ENST00000303391 ANKRD30AQ9BXX3 1397 aa13.3□□□□□ -0.28
MECP2-201ENST00000303391 RASSF8Q8NHQ8 419 aa13.29□□□□□ -0.28
MECP2-201ENST00000303391 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
MECP2-201ENST00000303391 ZRSR2Q15696 482 aaKnown RBP13.28□□□□□ -0.28
MECP2-201ENST00000303391 ZNF592Q92610 1267 aa13.28□□□□□ -0.28
MECP2-201ENST00000303391 INCENPQ9NQS7 918 aa13.28□□□□□ -0.28
MECP2-201ENST00000303391 IFT57Q9NWB7 429 aa13.27□□□□□ -0.28
MECP2-201ENST00000303391 DEF6Q9H4E7 631 aa13.27□□□□□ -0.29
MECP2-201ENST00000303391 GOLGA6L7A0A1B0GV03 622 aa13.27□□□□□ -0.29
MECP2-201ENST00000303391 NINLQ9Y2I6 1382 aa13.26□□□□□ -0.29
MECP2-201ENST00000303391 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
MECP2-201ENST00000303391 NFKBIBQ15653 356 aa13.26□□□□□ -0.29
MECP2-201ENST00000303391 RNF20Q5VTR2 975 aa13.26□□□□□ -0.29
MECP2-201ENST00000303391 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
MECP2-201ENST00000303391 UACAQ9BZF9 1416 aa13.26□□□□□ -0.29
MECP2-201ENST00000303391 CCDC47Q96A33 483 aaKnown RBP13.26□□□□□ -0.29
MECP2-201ENST00000303391 CPLX2Q6PUV4 134 aaKnown RBP13.26□□□□□ -0.29
MECP2-201ENST00000303391 SASS6Q6UVJ0 657 aa13.26□□□□□ -0.29
MECP2-201ENST00000303391 DDX19BQ9UMR2 479 aa13.25□□□□□ -0.29
MECP2-201ENST00000303391 U2AF1L5P0DN76 240 aaPredicted RBP13.25□□□□□ -0.29
MECP2-201ENST00000303391 U2AF1Q01081 240 aaKnown RBP eCLIP13.25□□□□□ -0.29
MECP2-201ENST00000303391 MCM2P49736 904 aa13.24□□□□□ -0.29
MECP2-201ENST00000303391 ZKSCAN1P17029 563 aaPredicted RBP13.24□□□□□ -0.29
MECP2-201ENST00000303391 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
MECP2-201ENST00000303391 NPHP1O15259 732 aa13.24□□□□□ -0.29
MECP2-201ENST00000303391 EIF3JO75822 258 aaKnown RBP13.24□□□□□ -0.29
MECP2-201ENST00000303391 ZKSCAN2Q63HK3 967 aa13.24□□□□□ -0.29
MECP2-201ENST00000303391 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
MECP2-201ENST00000303391 KIAA0754O94854 1291 aa13.23□□□□□ -0.29
MECP2-201ENST00000303391 CUX1P39880 1505 aa13.22□□□□□ -0.29
MECP2-201ENST00000303391 TXLNBQ8N3L3 684 aa13.22□□□□□ -0.29
MECP2-201ENST00000303391 TERF2IPQ9NYB0 399 aa13.22□□□□□ -0.29
MECP2-201ENST00000303391 PDIA4P13667 645 aaKnown RBP13.22□□□□□ -0.29
MECP2-201ENST00000303391 A0A0G2JS52 829 aa13.22□□□□□ -0.29
MECP2-201ENST00000303391 FAM107BQ9H098 131 aa13.22□□□□□ -0.29
MECP2-201ENST00000303391 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.29
MECP2-201ENST00000303391 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.3
MECP2-201ENST00000303391 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.3
MECP2-201ENST00000303391 INTS3Q68E01 1043 aaKnown RBP13.21□□□□□ -0.3
MECP2-201ENST00000303391 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
MECP2-201ENST00000303391 KIF2AO00139 706 aaPredicted RBP13.2□□□□□ -0.3
MECP2-201ENST00000303391 PDCP20941 246 aa13.2□□□□□ -0.3
MECP2-201ENST00000303391 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
MECP2-201ENST00000303391 AKAP17AQ02040 695 aaKnown RBP13.2□□□□□ -0.3
MECP2-201ENST00000303391 ERLIN1O75477 346 aa13.19□□□□□ -0.3
MECP2-201ENST00000303391 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
MECP2-201ENST00000303391 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
MECP2-201ENST00000303391 APBB1O00213 710 aa13.19□□□□□ -0.3
MECP2-201ENST00000303391 PES1O00541 588 aaKnown RBP13.19□□□□□ -0.3
MECP2-201ENST00000303391 SENP3-EIF4A1A0A087X0R7 540 aa13.18□□□□□ -0.3
MECP2-201ENST00000303391 TRIM29Q14134 588 aa13.18□□□□□ -0.3
MECP2-201ENST00000303391 EIF4G1Q04637 1599 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms