RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 LTV1Q96GA3 475 aaPredicted RBP17.59■□□□□ 0.41
HIPK3-201ENST00000303296 AK7Q96M32 723 aa17.58■□□□□ 0.4
HIPK3-201ENST00000303296 R3HCC1Q9Y3T6 440 aaKnown RBP17.58■□□□□ 0.4
HIPK3-201ENST00000303296 SPAG9O60271 1321 aaKnown RBP17.58■□□□□ 0.4
HIPK3-201ENST00000303296 HMMRO75330 724 aa17.57■□□□□ 0.4
HIPK3-201ENST00000303296 HOMER1Q86YM7 354 aa17.57■□□□□ 0.4
HIPK3-201ENST00000303296 NOL10Q9BSC4 688 aaKnown RBP17.57■□□□□ 0.4
HIPK3-201ENST00000303296 TMF1P82094 1093 aa17.57■□□□□ 0.4
HIPK3-201ENST00000303296 RILPL2Q969X0 211 aa17.57■□□□□ 0.4
HIPK3-201ENST00000303296 TEX35Q5T0J7 233 aa17.56■□□□□ 0.4
HIPK3-201ENST00000303296 HDGFP51858 240 aaKnown RBP17.56■□□□□ 0.4
HIPK3-201ENST00000303296 PHF23Q9BUL5 403 aaPredicted RBP17.55■□□□□ 0.4
HIPK3-201ENST00000303296 AMOTL1Q8IY63 956 aa17.55■□□□□ 0.4
HIPK3-201ENST00000303296 SYNE3Q6ZMZ3 975 aa17.55■□□□□ 0.4
HIPK3-201ENST00000303296 KIF3AQ9Y496 699 aa17.55■□□□□ 0.4
HIPK3-201ENST00000303296 NGEFQ8N5V2 710 aa17.55■□□□□ 0.4
HIPK3-201ENST00000303296 U2AF1L5P0DN76 240 aaPredicted RBP17.55■□□□□ 0.4
HIPK3-201ENST00000303296 U2AF1Q01081 240 aaKnown RBP eCLIP17.55■□□□□ 0.48e-15■■■■■ 28.3
HIPK3-201ENST00000303296 CCDC97Q96F63 343 aaPredicted RBP17.54■□□□□ 0.4
HIPK3-201ENST00000303296 HDGFL2Q7Z4V5 671 aaPredicted RBP17.54■□□□□ 0.4
HIPK3-201ENST00000303296 TMEM132AQ24JP5 1023 aa17.53■□□□□ 0.4
HIPK3-201ENST00000303296 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
HIPK3-201ENST00000303296 FOSBP53539 338 aa17.53■□□□□ 0.4
HIPK3-201ENST00000303296 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
HIPK3-201ENST00000303296 CFDP1Q9UEE9 299 aaPredicted RBP17.53■□□□□ 0.4
HIPK3-201ENST00000303296 CCDC191Q8NCU4 936 aa17.52■□□□□ 0.4
HIPK3-201ENST00000303296 EPS15P42566 896 aa17.52■□□□□ 0.39
HIPK3-201ENST00000303296 CCDC47Q96A33 483 aaKnown RBP17.51■□□□□ 0.39
HIPK3-201ENST00000303296 ST18O60284 1047 aa17.51■□□□□ 0.39
HIPK3-201ENST00000303296 TRIM29Q14134 588 aa17.51■□□□□ 0.39
HIPK3-201ENST00000303296 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
HIPK3-201ENST00000303296 PPM1FP49593 454 aaPredicted RBP17.5■□□□□ 0.39
HIPK3-201ENST00000303296 ANKRD20A12PQ8NF67 263 aa17.5■□□□□ 0.39
HIPK3-201ENST00000303296 ANKRD62A6NC57 917 aa17.5■□□□□ 0.39
HIPK3-201ENST00000303296 NEFHP12036 1026 aa17.5■□□□□ 0.39
HIPK3-201ENST00000303296 VPS37DQ86XT2 251 aa17.5■□□□□ 0.39
HIPK3-201ENST00000303296 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
HIPK3-201ENST00000303296 TTLL5Q6EMB2 1281 aa17.49■□□□□ 0.39
HIPK3-201ENST00000303296 CDR1P51861 262 aa17.48■□□□□ 0.39
HIPK3-201ENST00000303296 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
HIPK3-201ENST00000303296 MTMR7Q9Y216 660 aa17.47■□□□□ 0.39
HIPK3-201ENST00000303296 H0YHG0 523 aa17.47■□□□□ 0.39
HIPK3-201ENST00000303296 EVA1CP58658 441 aa17.46■□□□□ 0.39
HIPK3-201ENST00000303296 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
HIPK3-201ENST00000303296 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
HIPK3-201ENST00000303296 HSP90AB3PQ58FF7 597 aa17.46■□□□□ 0.39
HIPK3-201ENST00000303296 NOM1Q5C9Z4 860 aaKnown RBP17.45■□□□□ 0.38
HIPK3-201ENST00000303296 KDM4AO75164 1064 aa17.44■□□□□ 0.38
HIPK3-201ENST00000303296 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
HIPK3-201ENST00000303296 WWC2Q6AWC2 1192 aa17.44■□□□□ 0.38
HIPK3-201ENST00000303296 RBM19Q9Y4C8 960 aaKnown RBP17.44■□□□□ 0.38
HIPK3-201ENST00000303296 FYB1O15117 783 aa17.44■□□□□ 0.38
HIPK3-201ENST00000303296 RDXP35241 583 aaKnown RBP17.43■□□□□ 0.38
HIPK3-201ENST00000303296 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
HIPK3-201ENST00000303296 MEX3CQ5U5Q3 659 aaKnown RBP17.43■□□□□ 0.38
HIPK3-201ENST00000303296 FAM13BQ9NYF5 915 aa17.43■□□□□ 0.38
HIPK3-201ENST00000303296 SYTL4Q96C24 671 aaPredicted RBP17.43■□□□□ 0.38
HIPK3-201ENST00000303296 NFXL1Q6ZNB6 911 aa17.43■□□□□ 0.38
HIPK3-201ENST00000303296 CAGE1Q8TC20 777 aa17.43■□□□□ 0.38
HIPK3-201ENST00000303296 DDX49Q9Y6V7 483 aaKnown RBP17.43■□□□□ 0.38
HIPK3-201ENST00000303296 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
HIPK3-201ENST00000303296 OFD1O75665 1012 aa17.42■□□□□ 0.38
HIPK3-201ENST00000303296 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
HIPK3-201ENST00000303296 AMPHP49418 695 aa17.41■□□□□ 0.38
HIPK3-201ENST00000303296 CCDC173Q0VFZ6 552 aa17.41■□□□□ 0.38
HIPK3-201ENST00000303296 SIN3AQ96ST3 1273 aa17.41■□□□□ 0.38
HIPK3-201ENST00000303296 KANK1Q14678 1352 aa17.4■□□□□ 0.38
HIPK3-201ENST00000303296 GGT6Q6P531 493 aa17.4■□□□□ 0.38
HIPK3-201ENST00000303296 DCTN1Q14203 1278 aa17.4■□□□□ 0.38
HIPK3-201ENST00000303296 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
HIPK3-201ENST00000303296 IKQ13123 557 aaPredicted RBP17.4■□□□□ 0.38
HIPK3-201ENST00000303296 HDAC5Q9UQL6 1122 aa17.4■□□□□ 0.38
HIPK3-201ENST00000303296 HOOK1Q9UJC3 728 aaKnown RBP17.4■□□□□ 0.38
HIPK3-201ENST00000303296 ZRSR2Q15696 482 aaKnown RBP17.39■□□□□ 0.37
HIPK3-201ENST00000303296 IBSPP21815 317 aaPredicted RBP17.39■□□□□ 0.37
HIPK3-201ENST00000303296 BICD2Q8TD16 824 aa17.39■□□□□ 0.37
HIPK3-201ENST00000303296 NGDNQ8NEJ9 315 aaKnown RBP17.38■□□□□ 0.37
HIPK3-201ENST00000303296 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
HIPK3-201ENST00000303296 PDILTQ8N807 584 aa17.38■□□□□ 0.37
HIPK3-201ENST00000303296 CPLX1O14810 134 aa17.37■□□□□ 0.37
HIPK3-201ENST00000303296 CPLX2Q6PUV4 134 aaKnown RBP17.37■□□□□ 0.37
HIPK3-201ENST00000303296 WDR70Q9NW82 654 aa17.37■□□□□ 0.37
HIPK3-201ENST00000303296 SEPT7Q16181 437 aaKnown RBP17.36■□□□□ 0.37
HIPK3-201ENST00000303296 HSP90B2PQ58FF3 399 aa17.36■□□□□ 0.37
HIPK3-201ENST00000303296 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
HIPK3-201ENST00000303296 ERICH2A1L162 156 aa17.36■□□□□ 0.37
HIPK3-201ENST00000303296 MNS1Q8NEH6 495 aa17.36■□□□□ 0.37
HIPK3-201ENST00000303296 ANO2Q9NQ90 1003 aa17.35■□□□□ 0.37
HIPK3-201ENST00000303296 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
HIPK3-201ENST00000303296 TSPYL1Q9H0U9 437 aa17.35■□□□□ 0.37
HIPK3-201ENST00000303296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.35■□□□□ 0.37
HIPK3-201ENST00000303296 ENOX2Q16206 610 aaKnown RBP17.35■□□□□ 0.37
HIPK3-201ENST00000303296 DDX11L8A8MPP1 907 aa17.34■□□□□ 0.37
HIPK3-201ENST00000303296 ACBD3Q9H3P7 528 aa17.34■□□□□ 0.37
HIPK3-201ENST00000303296 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
HIPK3-201ENST00000303296 CHMP4AQ9BY43 222 aa17.34■□□□□ 0.37
HIPK3-201ENST00000303296 ANKRD45Q5TZF3 282 aa17.33■□□□□ 0.37
HIPK3-201ENST00000303296 IFT57Q9NWB7 429 aa17.33■□□□□ 0.36
HIPK3-201ENST00000303296 NUTM2DQ5VT03 806 aaPredicted RBP17.33■□□□□ 0.36
HIPK3-201ENST00000303296 ATP6V1DQ9Y5K8 247 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms