RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
CCDC7-202ENST00000302316 PKD2Q13563 968 aa18.85■□□□□ 0.61
CCDC7-202ENST00000302316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCDC7-202ENST00000302316 IQGAP3Q86VI3 1631 aa18.85■□□□□ 0.61
CCDC7-202ENST00000302316 A2MP01023 1474 aa18.84■□□□□ 0.61
CCDC7-202ENST00000302316 ANKRD30BQ9BXX2 1392 aa18.84■□□□□ 0.61
CCDC7-202ENST00000302316 DEPDC5O75140 1603 aa18.83■□□□□ 0.61
CCDC7-202ENST00000302316 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
CCDC7-202ENST00000302316 ZMYM4Q5VZL5 1548 aa18.82■□□□□ 0.6
CCDC7-202ENST00000302316 TONSLQ96HA7 1378 aa18.82■□□□□ 0.6
CCDC7-202ENST00000302316 DIP2CQ9Y2E4 1556 aa18.81■□□□□ 0.6
CCDC7-202ENST00000302316 KIF3BO15066 747 aa18.8■□□□□ 0.6
CCDC7-202ENST00000302316 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
CCDC7-202ENST00000302316 YEATS2Q9ULM3 1422 aa18.77■□□□□ 0.6
CCDC7-202ENST00000302316 RPRD2Q5VT52 1461 aaKnown RBP18.77■□□□□ 0.6
CCDC7-202ENST00000302316 KANK1Q14678 1352 aa18.76■□□□□ 0.59
CCDC7-202ENST00000302316 MROH1Q8NDA8 1641 aa18.76■□□□□ 0.59
CCDC7-202ENST00000302316 RNF17Q9BXT8 1623 aaKnown RBP18.76■□□□□ 0.59
CCDC7-202ENST00000302316 VWDEQ8N2E2 1590 aa18.74■□□□□ 0.59
CCDC7-202ENST00000302316 BCORL1Q5H9F3 1711 aa18.74■□□□□ 0.59
CCDC7-202ENST00000302316 COL17A1Q9UMD9 1497 aaPredicted RBP18.73■□□□□ 0.59
CCDC7-202ENST00000302316 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
CCDC7-202ENST00000302316 TET3O43151 1660 aa18.71■□□□□ 0.59
CCDC7-202ENST00000302316 PPP1R15AO75807 674 aaPredicted RBP18.69■□□□□ 0.58
CCDC7-202ENST00000302316 E9PCH4 1651 aa18.69■□□□□ 0.58
CCDC7-202ENST00000302316 ATP10AO60312 1499 aa18.68■□□□□ 0.58
CCDC7-202ENST00000302316 ARHGEF40Q8TER5 1519 aa18.67■□□□□ 0.58
CCDC7-202ENST00000302316 GGT6Q6P531 493 aa18.67■□□□□ 0.58
CCDC7-202ENST00000302316 CEP152O94986 1710 aa18.66■□□□□ 0.58
CCDC7-202ENST00000302316 REREQ9P2R6 1566 aa18.66■□□□□ 0.58
CCDC7-202ENST00000302316 LMTK2Q8IWU2 1503 aa18.66■□□□□ 0.58
CCDC7-202ENST00000302316 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
CCDC7-202ENST00000302316 PLA2R1Q13018 1463 aa18.66■□□□□ 0.58
CCDC7-202ENST00000302316 EFCAB6Q5THR3 1501 aa18.65■□□□□ 0.58
CCDC7-202ENST00000302316 L3MBTL2Q969R5 705 aa18.65■□□□□ 0.58
CCDC7-202ENST00000302316 SPHKAPQ2M3C7 1700 aa18.62■□□□□ 0.57
CCDC7-202ENST00000302316 ABCC3O15438 1527 aa18.62■□□□□ 0.57
CCDC7-202ENST00000302316 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
CCDC7-202ENST00000302316 TRPM2O94759 1503 aa18.61■□□□□ 0.57
CCDC7-202ENST00000302316 AGLP35573 1532 aa18.6■□□□□ 0.57
CCDC7-202ENST00000302316 WASHC2CQ9Y4E1 1318 aa18.6■□□□□ 0.57
CCDC7-202ENST00000302316 ZC3H13Q5T200 1668 aaKnown RBP18.59■□□□□ 0.57
CCDC7-202ENST00000302316 PTPRTO14522 1441 aa18.59■□□□□ 0.57
CCDC7-202ENST00000302316 CAMSAP1Q5T5Y3 1602 aa18.58■□□□□ 0.56
CCDC7-202ENST00000302316 SIGLEC1Q9BZZ2 1709 aa18.57■□□□□ 0.56
CCDC7-202ENST00000302316 NPATQ14207 1427 aa18.55■□□□□ 0.56
CCDC7-202ENST00000302316 CLTCL1P53675 1640 aa18.54■□□□□ 0.56
CCDC7-202ENST00000302316 NBPF8Q3BBV2 869 aa18.5■□□□□ 0.55
CCDC7-202ENST00000302316 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
CCDC7-202ENST00000302316 ARHGAP31Q2M1Z3 1444 aa18.49■□□□□ 0.55
CCDC7-202ENST00000302316 UGGT1Q9NYU2 1555 aa18.49■□□□□ 0.55
CCDC7-202ENST00000302316 SPATA31E1Q6ZUB1 1445 aa18.48■□□□□ 0.55
CCDC7-202ENST00000302316 CNTLNQ9NXG0 1405 aa18.48■□□□□ 0.55
CCDC7-202ENST00000302316 ZNF326Q5BKZ1 582 aaKnown RBP18.48■□□□□ 0.55
CCDC7-202ENST00000302316 DCAF11Q8TEB1 546 aa18.48■□□□□ 0.55
CCDC7-202ENST00000302316 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
CCDC7-202ENST00000302316 MLECQ14165 292 aa18.47■□□□□ 0.55
CCDC7-202ENST00000302316 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
CCDC7-202ENST00000302316 KDM2AQ9Y2K7 1162 aa18.46■□□□□ 0.55
CCDC7-202ENST00000302316 ARID4BQ4LE39 1312 aaPredicted RBP18.46■□□□□ 0.55
CCDC7-202ENST00000302316 NOS1P29475 1434 aa18.46■□□□□ 0.55
CCDC7-202ENST00000302316 CLTCQ00610 1675 aaKnown RBP18.46■□□□□ 0.55
CCDC7-202ENST00000302316 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
CCDC7-202ENST00000302316 NEURL4Q96JN8 1562 aa18.44■□□□□ 0.54
CCDC7-202ENST00000302316 KIF1BO60333 1816 aa18.44■□□□□ 0.54
CCDC7-202ENST00000302316 SYNMO15061 1565 aa18.43■□□□□ 0.54
CCDC7-202ENST00000302316 PREX1Q8TCU6 1659 aa18.42■□□□□ 0.54
CCDC7-202ENST00000302316 PRAG1Q86YV5 1406 aa18.41■□□□□ 0.54
CCDC7-202ENST00000302316 RALGAPBQ86X10 1494 aa18.41■□□□□ 0.54
CCDC7-202ENST00000302316 ESF1Q9H501 851 aaKnown RBP18.4■□□□□ 0.54
CCDC7-202ENST00000302316 MROH2AA6NES4 1674 aa18.4■□□□□ 0.54
CCDC7-202ENST00000302316 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
CCDC7-202ENST00000302316 PIK3C2BO00750 1634 aa18.4■□□□□ 0.54
CCDC7-202ENST00000302316 DIEXFQ68CQ4 756 aaKnown RBP18.39■□□□□ 0.53
CCDC7-202ENST00000302316 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
CCDC7-202ENST00000302316 ERVK-7P63135 1459 aa18.39■□□□□ 0.53
CCDC7-202ENST00000302316 EIF4G2P78344 907 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCDC7-202ENST00000302316 CHGAP10645 457 aaKnown RBP18.37■□□□□ 0.53
CCDC7-202ENST00000302316 TRPM1Q7Z4N2 1603 aa18.36■□□□□ 0.53
CCDC7-202ENST00000302316 HSPA5P11021 654 aaKnown RBP18.35■□□□□ 0.53
CCDC7-202ENST00000302316 MADDQ8WXG6 1647 aa18.35■□□□□ 0.53
CCDC7-202ENST00000302316 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
CCDC7-202ENST00000302316 SLC52A1Q9NWF4 448 aa18.34■□□□□ 0.53
CCDC7-202ENST00000302316 ROCK2O75116 1388 aaKnown RBP18.34■□□□□ 0.53
CCDC7-202ENST00000302316 STAC3Q96MF2 364 aa18.34■□□□□ 0.53
CCDC7-202ENST00000302316 SPATA31D1Q6ZQQ2 1576 aa18.34■□□□□ 0.53
CCDC7-202ENST00000302316 IFT172Q9UG01 1749 aa18.33■□□□□ 0.53
CCDC7-202ENST00000302316 ZMYM3Q14202 1370 aa18.33■□□□□ 0.52
CCDC7-202ENST00000302316 MYOM2P54296 1465 aa18.32■□□□□ 0.52
CCDC7-202ENST00000302316 CARD11Q9BXL7 1154 aa18.32■□□□□ 0.52
CCDC7-202ENST00000302316 USP47Q96K76 1375 aa18.31■□□□□ 0.52
CCDC7-202ENST00000302316 IDI1Q13907 227 aa18.31■□□□□ 0.52
CCDC7-202ENST00000302316 FER1L4A9Z1Z3 1794 aa18.28■□□□□ 0.52
CCDC7-202ENST00000302316 PPLO60437 1756 aa18.28■□□□□ 0.52
CCDC7-202ENST00000302316 GPRASP1Q5JY77 1395 aa18.28■□□□□ 0.52
CCDC7-202ENST00000302316 LAMC1P11047 1609 aa18.28■□□□□ 0.52
CCDC7-202ENST00000302316 TMEM131LA2VDJ0 1609 aa18.27■□□□□ 0.52
CCDC7-202ENST00000302316 RPGRIP1LQ68CZ1 1315 aa18.27■□□□□ 0.51
CCDC7-202ENST00000302316 NBPF1Q3BBV0 1214 aa18.26■□□□□ 0.51
CCDC7-202ENST00000302316 NRXN1Q9ULB1 1477 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms