RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 RRP1P56182 461 aaKnown RBP14.87□□□□□ -0.03
ATP1A3-201ENST00000302102 PDE4AP27815 886 aa14.86□□□□□ -0.03
ATP1A3-201ENST00000302102 KTN1Q86UP2 1357 aaKnown RBP14.86□□□□□ -0.03
ATP1A3-201ENST00000302102 ANKRD30AQ9BXX3 1397 aa14.86□□□□□ -0.03
ATP1A3-201ENST00000302102 TMF1P82094 1093 aa14.86□□□□□ -0.03
ATP1A3-201ENST00000302102 RRP7AQ9Y3A4 280 aaKnown RBP14.86□□□□□ -0.03
ATP1A3-201ENST00000302102 NLRP13Q86W25 1043 aa14.85□□□□□ -0.03
ATP1A3-201ENST00000302102 PPM1GO15355 546 aaPredicted RBP14.85□□□□□ -0.03
ATP1A3-201ENST00000302102 EFCAB2Q5VUJ9 269 aa14.85□□□□□ -0.03
ATP1A3-201ENST00000302102 CLUAP1Q96AJ1 413 aa14.85□□□□□ -0.03
ATP1A3-201ENST00000302102 BCL2L13Q9BXK5 485 aa14.85□□□□□ -0.03
ATP1A3-201ENST00000302102 SLC24A1O60721 1099 aa14.84□□□□□ -0.03
ATP1A3-201ENST00000302102 ERICH6BQ5W0A0 696 aa14.84□□□□□ -0.03
ATP1A3-201ENST00000302102 PNISRQ8TF01 805 aaKnown RBP14.84□□□□□ -0.03
ATP1A3-201ENST00000302102 LRRIQ1Q96JM4 1722 aa14.84□□□□□ -0.03
ATP1A3-201ENST00000302102 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.83□□□□□ -0.04
ATP1A3-201ENST00000302102 AFAP1Q8N556 730 aa14.83□□□□□ -0.04
ATP1A3-201ENST00000302102 SLKQ9H2G2 1235 aaPredicted RBP14.83□□□□□ -0.04
ATP1A3-201ENST00000302102 MYBBP1AQ9BQG0 1328 aaKnown RBP14.82□□□□□ -0.04
ATP1A3-201ENST00000302102 RALBP1Q15311 655 aa14.8□□□□□ -0.04
ATP1A3-201ENST00000302102 KIF14Q15058 1648 aa14.8□□□□□ -0.04
ATP1A3-201ENST00000302102 ABCA8O94911 1581 aa14.79□□□□□ -0.04
ATP1A3-201ENST00000302102 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
ATP1A3-201ENST00000302102 FAM69CQ0P6D2 419 aa14.79□□□□□ -0.04
ATP1A3-201ENST00000302102 ARHGAP5Q13017 1502 aa14.79□□□□□ -0.04
ATP1A3-201ENST00000302102 GPATCH8Q9UKJ3 1502 aaKnown RBP14.79□□□□□ -0.04
ATP1A3-201ENST00000302102 PTPN23Q9H3S7 1636 aa14.79□□□□□ -0.04
ATP1A3-201ENST00000302102 CLASP1Q7Z460 1538 aa14.78□□□□□ -0.04
ATP1A3-201ENST00000302102 ADAMTS8Q9UP79 889 aa14.78□□□□□ -0.04
ATP1A3-201ENST00000302102 KIF15Q9NS87 1388 aa14.78□□□□□ -0.04
ATP1A3-201ENST00000302102 ABCC2Q92887 1545 aa14.77□□□□□ -0.05
ATP1A3-201ENST00000302102 APAF1O14727 1248 aa14.77□□□□□ -0.05
ATP1A3-201ENST00000302102 IL27Q8NEV9 243 aa14.77□□□□□ -0.05
ATP1A3-201ENST00000302102 U2SURPO15042 1029 aaKnown RBP14.76□□□□□ -0.05
ATP1A3-201ENST00000302102 C20orf194Q5TEA3 1177 aa14.76□□□□□ -0.05
ATP1A3-201ENST00000302102 TCERG1O14776 1098 aaKnown RBP14.76□□□□□ -0.05
ATP1A3-201ENST00000302102 PLEKHG5O94827 1062 aa14.76□□□□□ -0.05
ATP1A3-201ENST00000302102 PRKCSHP14314 528 aaPredicted RBP14.75□□□□□ -0.05
ATP1A3-201ENST00000302102 ANKRD30BQ9BXX2 1392 aa14.75□□□□□ -0.05
ATP1A3-201ENST00000302102 MIA2Q96PC5 1412 aa14.75□□□□□ -0.05
ATP1A3-201ENST00000302102 ANKRD50Q9ULJ7 1429 aa14.75□□□□□ -0.05
ATP1A3-201ENST00000302102 GGT6Q6P531 493 aa14.75□□□□□ -0.05
ATP1A3-201ENST00000302102 STK26Q9P289 416 aa14.74□□□□□ -0.05
ATP1A3-201ENST00000302102 CAMSAP2Q08AD1 1489 aa14.74□□□□□ -0.05
ATP1A3-201ENST00000302102 HSP90AA1P07900 732 aaKnown RBP14.74□□□□□ -0.05
ATP1A3-201ENST00000302102 UPF2Q9HAU5 1272 aaKnown RBP14.74□□□□□ -0.05
ATP1A3-201ENST00000302102 DAPK1P53355 1430 aa14.74□□□□□ -0.05
ATP1A3-201ENST00000302102 ABCC5O15440 1437 aa14.73□□□□□ -0.05
ATP1A3-201ENST00000302102 ASXL2Q76L83 1435 aa14.73□□□□□ -0.05
ATP1A3-201ENST00000302102 SPAG9O60271 1321 aaKnown RBP14.73□□□□□ -0.05
ATP1A3-201ENST00000302102 GZF1Q9H116 711 aaPredicted RBP14.73□□□□□ -0.05
ATP1A3-201ENST00000302102 KIF3BO15066 747 aa14.72□□□□□ -0.05
ATP1A3-201ENST00000302102 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
ATP1A3-201ENST00000302102 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
ATP1A3-201ENST00000302102 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
ATP1A3-201ENST00000302102 TRAK1Q9UPV9 953 aa14.72□□□□□ -0.05
ATP1A3-201ENST00000302102 COG6Q9Y2V7 657 aa14.72□□□□□ -0.05
ATP1A3-201ENST00000302102 RAPGEF3O95398 923 aa14.71□□□□□ -0.05
ATP1A3-201ENST00000302102 CCDC144AA2RUR9 1427 aa14.71□□□□□ -0.05
ATP1A3-201ENST00000302102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.06
ATP1A3-201ENST00000302102 NCOA1Q15788 1441 aa14.69□□□□□ -0.06
ATP1A3-201ENST00000302102 SHROOM2Q13796 1616 aa14.69□□□□□ -0.06
ATP1A3-201ENST00000302102 MORC1Q86VD1 984 aa14.68□□□□□ -0.06
ATP1A3-201ENST00000302102 FTSJ3Q8IY81 847 aaKnown RBP14.68□□□□□ -0.06
ATP1A3-201ENST00000302102 TPRNQ4KMQ1 711 aa14.67□□□□□ -0.06
ATP1A3-201ENST00000302102 C9orf84Q5VXU9 1444 aa14.67□□□□□ -0.06
ATP1A3-201ENST00000302102 BCAR3O75815 825 aa14.67□□□□□ -0.06
ATP1A3-201ENST00000302102 MLECQ14165 292 aa14.67□□□□□ -0.06
ATP1A3-201ENST00000302102 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
ATP1A3-201ENST00000302102 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.06
ATP1A3-201ENST00000302102 PANK1Q8TE04 598 aa14.66□□□□□ -0.06
ATP1A3-201ENST00000302102 SOX12O15370 315 aa14.65□□□□□ -0.06
ATP1A3-201ENST00000302102 WDR7Q9Y4E6 1490 aa14.65□□□□□ -0.06
ATP1A3-201ENST00000302102 SCAPERQ9BY12 1400 aa14.64□□□□□ -0.07
ATP1A3-201ENST00000302102 CDCA8Q53HL2 280 aa14.64□□□□□ -0.07
ATP1A3-201ENST00000302102 ANO8Q9HCE9 1232 aaPredicted RBP14.64□□□□□ -0.07
ATP1A3-201ENST00000302102 BRPF3Q9ULD4 1205 aa14.64□□□□□ -0.07
ATP1A3-201ENST00000302102 CD109Q6YHK3 1445 aa14.64□□□□□ -0.07
ATP1A3-201ENST00000302102 ARID4BQ4LE39 1312 aaPredicted RBP14.64□□□□□ -0.07
ATP1A3-201ENST00000302102 ZCCHC11Q5TAX3 1644 aaKnown RBP14.64□□□□□ -0.07
ATP1A3-201ENST00000302102 KIAA1107Q9UPP5 1409 aa14.63□□□□□ -0.07
ATP1A3-201ENST00000302102 RSPH4AQ5TD94 716 aa14.63□□□□□ -0.07
ATP1A3-201ENST00000302102 KDM5BQ9UGL1 1544 aa14.63□□□□□ -0.07
ATP1A3-201ENST00000302102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.62□□□□□ -0.07
ATP1A3-201ENST00000302102 ABCC10Q5T3U5 1492 aa14.62□□□□□ -0.07
ATP1A3-201ENST00000302102 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
ATP1A3-201ENST00000302102 ADCY10Q96PN6 1610 aa14.62□□□□□ -0.07
ATP1A3-201ENST00000302102 SMG6Q86US8 1419 aaKnown RBP14.62□□□□□ -0.07
ATP1A3-201ENST00000302102 PDE3BQ13370 1112 aa14.62□□□□□ -0.07
ATP1A3-201ENST00000302102 TTC37Q6PGP7 1564 aa14.61□□□□□ -0.07
ATP1A3-201ENST00000302102 SYCP2Q9BX26 1530 aa14.61□□□□□ -0.07
ATP1A3-201ENST00000302102 CFAP70Q5T0N1 1121 aa14.61□□□□□ -0.07
ATP1A3-201ENST00000302102 APBB1O00213 710 aa14.61□□□□□ -0.07
ATP1A3-201ENST00000302102 SRPK2P78362 688 aaKnown RBP14.61□□□□□ -0.07
ATP1A3-201ENST00000302102 BACH2Q9BYV9 841 aa14.61□□□□□ -0.07
ATP1A3-201ENST00000302102 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
ATP1A3-201ENST00000302102 ELL2O00472 640 aaPredicted RBP14.6□□□□□ -0.07
ATP1A3-201ENST00000302102 PLCH2O75038 1416 aa14.6□□□□□ -0.07
ATP1A3-201ENST00000302102 FANCAO15360 1455 aa14.6□□□□□ -0.07
ATP1A3-201ENST00000302102 TCOF1Q13428 1488 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms