RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
MMP3-201ENST00000299855 RGL2O15211 777 aa12.23□□□□□ -0.45
MMP3-201ENST00000299855 KDM4AO75164 1064 aa12.23□□□□□ -0.45
MMP3-201ENST00000299855 GLIPR1L2Q4G1C9 344 aa12.21□□□□□ -0.46
MMP3-201ENST00000299855 SLC24A3Q9HC58 644 aa12.21□□□□□ -0.46
MMP3-201ENST00000299855 CHRM1P11229 460 aaPredicted RBP12.2□□□□□ -0.46
MMP3-201ENST00000299855 ANAPC15P60006 121 aa12.2□□□□□ -0.46
MMP3-201ENST00000299855 KIAA0586Q9BVV6 1533 aa12.2□□□□□ -0.46
MMP3-201ENST00000299855 CHGAP10645 457 aaKnown RBP12.2□□□□□ -0.46
MMP3-201ENST00000299855 MCCP23508 829 aa12.19□□□□□ -0.46
MMP3-201ENST00000299855 CANXP27824 592 aaKnown RBP12.19□□□□□ -0.46
MMP3-201ENST00000299855 ITGAEP38570 1179 aa12.19□□□□□ -0.46
MMP3-201ENST00000299855 TRIM52Q96A61 297 aa12.19□□□□□ -0.46
MMP3-201ENST00000299855 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
MMP3-201ENST00000299855 GRIPAP1Q4V328 841 aa12.18□□□□□ -0.46
MMP3-201ENST00000299855 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
MMP3-201ENST00000299855 TIAM1Q13009 1591 aa12.17□□□□□ -0.46
MMP3-201ENST00000299855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.16□□□□□ -0.46
MMP3-201ENST00000299855 PPP4R2Q9NY27 417 aa12.16□□□□□ -0.46
MMP3-201ENST00000299855 EXOC8Q8IYI6 725 aa12.14□□□□□ -0.47
MMP3-201ENST00000299855 DNAJC2Q99543 621 aaKnown RBP12.14□□□□□ -0.47
MMP3-201ENST00000299855 SIN3AQ96ST3 1273 aa12.13□□□□□ -0.47
MMP3-201ENST00000299855 LRRC9Q6ZRR7 1453 aa12.12□□□□□ -0.47
MMP3-201ENST00000299855 HSP90AB4PQ58FF6 505 aa12.12□□□□□ -0.47
MMP3-201ENST00000299855 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
MMP3-201ENST00000299855 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
MMP3-201ENST00000299855 GPATCH11Q8N954 259 aa12.11□□□□□ -0.47
MMP3-201ENST00000299855 DEKP35659 375 aaKnown RBP12.11□□□□□ -0.47
MMP3-201ENST00000299855 MKRN3Q13064 507 aaKnown RBP12.11□□□□□ -0.47
MMP3-201ENST00000299855 NEFMP07197 916 aa12.1□□□□□ -0.47
MMP3-201ENST00000299855 IQGAP2Q13576 1575 aa12.09□□□□□ -0.47
MMP3-201ENST00000299855 CARMIL2Q6F5E8 1435 aa12.09□□□□□ -0.47
MMP3-201ENST00000299855 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
MMP3-201ENST00000299855 LOC102724159A0A0B4J2E5 919 aa12.08□□□□□ -0.48
MMP3-201ENST00000299855 PWP2Q15269 919 aaKnown RBP12.08□□□□□ -0.48
MMP3-201ENST00000299855 PLEKHD1A6NEE1 506 aa12.08□□□□□ -0.48
MMP3-201ENST00000299855 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
MMP3-201ENST00000299855 PTPRGP23470 1445 aa12.07□□□□□ -0.48
MMP3-201ENST00000299855 PTMAP06454 111 aaKnown RBP12.07□□□□□ -0.48
MMP3-201ENST00000299855 HNRNPUQ00839 825 aaKnown RBP eCLIP12.07□□□□□ -0.48
MMP3-201ENST00000299855 NAP1L2Q9ULW6 460 aaPredicted RBP12.07□□□□□ -0.48
MMP3-201ENST00000299855 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
MMP3-201ENST00000299855 ANKRD13AQ8IZ07 590 aa12.06□□□□□ -0.48
MMP3-201ENST00000299855 RIPOR2Q9Y4F9 1068 aa12.06□□□□□ -0.48
MMP3-201ENST00000299855 CFAP43Q8NDM7 1665 aa12.05□□□□□ -0.48
MMP3-201ENST00000299855 PHLDB1Q86UU1 1377 aa12.05□□□□□ -0.48
MMP3-201ENST00000299855 TONSLQ96HA7 1378 aa12.05□□□□□ -0.48
MMP3-201ENST00000299855 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
MMP3-201ENST00000299855 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
MMP3-201ENST00000299855 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
MMP3-201ENST00000299855 NOL8Q76FK4 1167 aaKnown RBP12.04□□□□□ -0.48
MMP3-201ENST00000299855 NOP58Q9Y2X3 529 aaKnown RBP12.04□□□□□ -0.48
MMP3-201ENST00000299855 WWC1Q8IX03 1113 aa12.03□□□□□ -0.48
MMP3-201ENST00000299855 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
MMP3-201ENST00000299855 IL27Q8NEV9 243 aa12.03□□□□□ -0.48
MMP3-201ENST00000299855 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
MMP3-201ENST00000299855 UGGT2Q9NYU1 1516 aa12.02□□□□□ -0.48
MMP3-201ENST00000299855 IPO4Q8TEX9 1081 aaKnown RBP12.02□□□□□ -0.49
MMP3-201ENST00000299855 DISP1Q96F81 1524 aa12.02□□□□□ -0.49
MMP3-201ENST00000299855 DIP2BQ9P265 1576 aa12.01□□□□□ -0.49
MMP3-201ENST00000299855 SMARCA5O60264 1052 aaPredicted RBP12.01□□□□□ -0.49
MMP3-201ENST00000299855 BARGINQ6ZT62 677 aa12.01□□□□□ -0.49
MMP3-201ENST00000299855 SECISBP2LQ93073 1101 aaKnown RBP12.01□□□□□ -0.49
MMP3-201ENST00000299855 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
MMP3-201ENST00000299855 FAM50AQ14320 339 aaKnown RBP12□□□□□ -0.49
MMP3-201ENST00000299855 HIRIP3Q9BW71 556 aaPredicted RBP12□□□□□ -0.49
MMP3-201ENST00000299855 UHRF1BP1LA0JNW5 1464 aa12□□□□□ -0.49
MMP3-201ENST00000299855 FAM43BQ6ZT52 329 aaPredicted RBP11.99□□□□□ -0.49
MMP3-201ENST00000299855 ABCC2Q92887 1545 aa11.99□□□□□ -0.49
MMP3-201ENST00000299855 SPATA32Q96LK8 384 aa11.99□□□□□ -0.49
MMP3-201ENST00000299855 CTTNBP2Q8WZ74 1663 aa11.99□□□□□ -0.49
MMP3-201ENST00000299855 ZBED9Q6R2W3 1325 aa11.98□□□□□ -0.49
MMP3-201ENST00000299855 KIAA0556O60303 1618 aa11.98□□□□□ -0.49
MMP3-201ENST00000299855 RETREG2Q8NC44 543 aa11.98□□□□□ -0.49
MMP3-201ENST00000299855 NCOA2Q15596 1464 aa11.97□□□□□ -0.49
MMP3-201ENST00000299855 IRF5Q13568 498 aa11.97□□□□□ -0.49
MMP3-201ENST00000299855 MYH16Q9H6N6 1097 aa11.97□□□□□ -0.49
MMP3-201ENST00000299855 SALL2Q9Y467 1007 aaPredicted RBP11.97□□□□□ -0.49
MMP3-201ENST00000299855 TRAK2O60296 914 aa11.96□□□□□ -0.49
MMP3-201ENST00000299855 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
MMP3-201ENST00000299855 LAS1LQ9Y4W2 734 aaKnown RBP11.96□□□□□ -0.49
MMP3-201ENST00000299855 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
MMP3-201ENST00000299855 PLB1Q6P1J6 1458 aa11.95□□□□□ -0.5
MMP3-201ENST00000299855 BRD1O95696 1058 aa11.94□□□□□ -0.5
MMP3-201ENST00000299855 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
MMP3-201ENST00000299855 OS9Q13438 667 aaPredicted RBP11.94□□□□□ -0.5
MMP3-201ENST00000299855 IPO9Q96P70 1041 aaKnown RBP11.94□□□□□ -0.5
MMP3-201ENST00000299855 ASXL2Q76L83 1435 aa11.94□□□□□ -0.5
MMP3-201ENST00000299855 FYCO1Q9BQS8 1478 aa11.94□□□□□ -0.5
MMP3-201ENST00000299855 FLIIQ13045 1269 aa11.94□□□□□ -0.5
MMP3-201ENST00000299855 TMTC2Q8N394 836 aa11.94□□□□□ -0.5
MMP3-201ENST00000299855 SPOCK2Q92563 424 aa11.94□□□□□ -0.5
MMP3-201ENST00000299855 CCDC18Q5T9S5 1454 aa11.94□□□□□ -0.5
MMP3-201ENST00000299855 KDM5BQ9UGL1 1544 aa11.93□□□□□ -0.5
MMP3-201ENST00000299855 CNTLNQ9NXG0 1405 aa11.93□□□□□ -0.5
MMP3-201ENST00000299855 ANP32AP39687 249 aaKnown RBP11.93□□□□□ -0.5
MMP3-201ENST00000299855 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
MMP3-201ENST00000299855 WASHC2AQ641Q2 1341 aa11.92□□□□□ -0.5
MMP3-201ENST00000299855 SPTY2D1Q68D10 685 aaPredicted RBP11.92□□□□□ -0.5
MMP3-201ENST00000299855 FTSJ3Q8IY81 847 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms