RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 EIF3AQ14152 1382 aaKnown RBP13.33□□□□□ -0.28
GABRB3-201ENST00000299267 THOC2Q8NI27 1593 aaKnown RBP13.31□□□□□ -0.28
GABRB3-201ENST00000299267 ABCC5O15440 1437 aa13.31□□□□□ -0.28
GABRB3-201ENST00000299267 PRKRIP1Q9H875 184 aaPredicted RBP13.31□□□□□ -0.28
GABRB3-201ENST00000299267 RRP7AQ9Y3A4 280 aaKnown RBP13.31□□□□□ -0.28
GABRB3-201ENST00000299267 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
GABRB3-201ENST00000299267 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
GABRB3-201ENST00000299267 SUPT6HQ7KZ85 1726 aaKnown RBP13.3□□□□□ -0.28
GABRB3-201ENST00000299267 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
GABRB3-201ENST00000299267 ATP10BO94823 1461 aa13.3□□□□□ -0.28
GABRB3-201ENST00000299267 RALBP1Q15311 655 aa13.3□□□□□ -0.28
GABRB3-201ENST00000299267 SLC26A8Q96RN1 970 aa13.3□□□□□ -0.28
GABRB3-201ENST00000299267 CEBPAP49715 358 aaPredicted RBP13.29□□□□□ -0.28
GABRB3-201ENST00000299267 TXNDC2Q86VQ3 553 aa13.29□□□□□ -0.28
GABRB3-201ENST00000299267 FBXO31Q5XUX0 539 aaPredicted RBP13.29□□□□□ -0.28
GABRB3-201ENST00000299267 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
GABRB3-201ENST00000299267 NLRP13Q86W25 1043 aa13.28□□□□□ -0.28
GABRB3-201ENST00000299267 WASHC2AQ641Q2 1341 aa13.28□□□□□ -0.28
GABRB3-201ENST00000299267 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
GABRB3-201ENST00000299267 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.28
GABRB3-201ENST00000299267 CAMSAP2Q08AD1 1489 aa13.27□□□□□ -0.28
GABRB3-201ENST00000299267 EVC2Q86UK5 1308 aa13.27□□□□□ -0.29
GABRB3-201ENST00000299267 NUP153P49790 1475 aaKnown RBP13.26□□□□□ -0.29
GABRB3-201ENST00000299267 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-201ENST00000299267 KIAA1107Q9UPP5 1409 aa13.26□□□□□ -0.29
GABRB3-201ENST00000299267 EIF4G3O43432 1585 aaKnown RBP13.26□□□□□ -0.29
GABRB3-201ENST00000299267 ANP32AP39687 249 aaKnown RBP13.26□□□□□ -0.29
GABRB3-201ENST00000299267 NUTM2GQ5VZR2 741 aa13.26□□□□□ -0.29
GABRB3-201ENST00000299267 PTPRKQ15262 1439 aa13.25□□□□□ -0.29
GABRB3-201ENST00000299267 AMPHP49418 695 aa13.24□□□□□ -0.29
GABRB3-201ENST00000299267 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
GABRB3-201ENST00000299267 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
GABRB3-201ENST00000299267 ADGRL1O94910 1474 aa13.24□□□□□ -0.29
GABRB3-201ENST00000299267 RGS3P49796 1198 aa13.23□□□□□ -0.29
GABRB3-201ENST00000299267 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
GABRB3-201ENST00000299267 GPATCH8Q9UKJ3 1502 aaKnown RBP13.23□□□□□ -0.29
GABRB3-201ENST00000299267 PRAM1Q96QH2 718 aa13.23□□□□□ -0.29
GABRB3-201ENST00000299267 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
GABRB3-201ENST00000299267 CCDC7Q96M83 1385 aa13.22□□□□□ -0.29
GABRB3-201ENST00000299267 SLC12A5Q9H2X9 1139 aa13.22□□□□□ -0.29
GABRB3-201ENST00000299267 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
GABRB3-201ENST00000299267 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
GABRB3-201ENST00000299267 RTF1Q92541 710 aaKnown RBP13.21□□□□□ -0.29
GABRB3-201ENST00000299267 MYH16Q9H6N6 1097 aa13.21□□□□□ -0.29
GABRB3-201ENST00000299267 WDR62O43379 1518 aa13.21□□□□□ -0.29
GABRB3-201ENST00000299267 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
GABRB3-201ENST00000299267 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.3
GABRB3-201ENST00000299267 FANCAO15360 1455 aa13.2□□□□□ -0.3
GABRB3-201ENST00000299267 ASXL2Q76L83 1435 aa13.2□□□□□ -0.3
GABRB3-201ENST00000299267 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
GABRB3-201ENST00000299267 PMFBP1Q8TBY8 1022 aa13.2□□□□□ -0.3
GABRB3-201ENST00000299267 IDI1Q13907 227 aa13.19□□□□□ -0.3
GABRB3-201ENST00000299267 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.19□□□□□ -0.3
GABRB3-201ENST00000299267 CLUAP1Q96AJ1 413 aa13.19□□□□□ -0.3
GABRB3-201ENST00000299267 MYBBP1AQ9BQG0 1328 aaKnown RBP13.19□□□□□ -0.3
GABRB3-201ENST00000299267 CCDC9Q9Y3X0 531 aaKnown RBP13.19□□□□□ -0.3
GABRB3-201ENST00000299267 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
GABRB3-201ENST00000299267 COG3Q96JB2 828 aa13.19□□□□□ -0.3
GABRB3-201ENST00000299267 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
GABRB3-201ENST00000299267 SLC52A1Q9NWF4 448 aa13.18□□□□□ -0.3
GABRB3-201ENST00000299267 APAF1O14727 1248 aa13.18□□□□□ -0.3
GABRB3-201ENST00000299267 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-201ENST00000299267 ROCK1Q13464 1354 aa13.18□□□□□ -0.3
GABRB3-201ENST00000299267 KIF14Q15058 1648 aa13.18□□□□□ -0.3
GABRB3-201ENST00000299267 BCL2L13Q9BXK5 485 aa13.17□□□□□ -0.3
GABRB3-201ENST00000299267 C11orf95C9JLR9 678 aaPredicted RBP13.17□□□□□ -0.3
GABRB3-201ENST00000299267 PSME1Q06323 249 aa13.17□□□□□ -0.3
GABRB3-201ENST00000299267 RCAN3Q9UKA8 241 aa13.17□□□□□ -0.3
GABRB3-201ENST00000299267 AKNAQ7Z591 1439 aa13.17□□□□□ -0.3
GABRB3-201ENST00000299267 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
GABRB3-201ENST00000299267 UPF2Q9HAU5 1272 aaKnown RBP13.16□□□□□ -0.3
GABRB3-201ENST00000299267 ANKRD30BQ9BXX2 1392 aa13.16□□□□□ -0.3
GABRB3-201ENST00000299267 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
GABRB3-201ENST00000299267 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
GABRB3-201ENST00000299267 WDR97A6NE52 1622 aa13.15□□□□□ -0.3
GABRB3-201ENST00000299267 RAPGEF6Q8TEU7 1601 aa13.15□□□□□ -0.3
GABRB3-201ENST00000299267 ERBINQ96RT1 1412 aa13.15□□□□□ -0.3
GABRB3-201ENST00000299267 WAPLQ7Z5K2 1190 aa13.15□□□□□ -0.3
GABRB3-201ENST00000299267 NUP160Q12769 1436 aa13.15□□□□□ -0.3
GABRB3-201ENST00000299267 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
GABRB3-201ENST00000299267 APBB1O00213 710 aa13.14□□□□□ -0.31
GABRB3-201ENST00000299267 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
GABRB3-201ENST00000299267 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
GABRB3-201ENST00000299267 THEMISQ8N1K5 641 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-201ENST00000299267 UGGT2Q9NYU1 1516 aa13.14□□□□□ -0.31
GABRB3-201ENST00000299267 PLIN1O60240 522 aa13.13□□□□□ -0.31
GABRB3-201ENST00000299267 HMOX1P09601 288 aa13.13□□□□□ -0.31
GABRB3-201ENST00000299267 CCDC184Q52MB2 194 aa13.13□□□□□ -0.31
GABRB3-201ENST00000299267 CABP1Q9NZU7 370 aa13.13□□□□□ -0.31
GABRB3-201ENST00000299267 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
GABRB3-201ENST00000299267 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
GABRB3-201ENST00000299267 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
GABRB3-201ENST00000299267 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
GABRB3-201ENST00000299267 PROSER2Q86WR7 435 aaPredicted RBP13.12□□□□□ -0.31
GABRB3-201ENST00000299267 MTHFSP49914 203 aa13.11□□□□□ -0.31
GABRB3-201ENST00000299267 NLRP6P59044 892 aa13.11□□□□□ -0.31
GABRB3-201ENST00000299267 PLCH2O75038 1416 aa13.11□□□□□ -0.31
GABRB3-201ENST00000299267 ESCO1Q5FWF5 840 aa13.11□□□□□ -0.31
GABRB3-201ENST00000299267 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-201ENST00000299267 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms