RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 LRRFIP1Q32MZ4 808 aaKnown RBP17.77■□□□□ 0.44
SPRED1-201ENST00000299084 AMPHP49418 695 aa17.77■□□□□ 0.43
SPRED1-201ENST00000299084 ITPRIPQ8IWB1 547 aa17.76■□□□□ 0.43
SPRED1-201ENST00000299084 PHF14O94880 888 aa17.76■□□□□ 0.43
SPRED1-201ENST00000299084 TMEM132AQ24JP5 1023 aa17.76■□□□□ 0.43
SPRED1-201ENST00000299084 VSIG10Q8N0Z9 540 aa17.75■□□□□ 0.43
SPRED1-201ENST00000299084 CHMP4CQ96CF2 233 aa17.75■□□□□ 0.43
SPRED1-201ENST00000299084 SLC4A10Q6U841 1118 aa17.75■□□□□ 0.43
SPRED1-201ENST00000299084 B4GALNT3Q6L9W6 998 aa17.74■□□□□ 0.43
SPRED1-201ENST00000299084 CLIP1P30622 1438 aa17.73■□□□□ 0.43
SPRED1-201ENST00000299084 SF3B2Q13435 895 aaKnown RBP17.73■□□□□ 0.43
SPRED1-201ENST00000299084 LTV1Q96GA3 475 aaPredicted RBP17.73■□□□□ 0.43
SPRED1-201ENST00000299084 SYTL4Q96C24 671 aaPredicted RBP17.72■□□□□ 0.43
SPRED1-201ENST00000299084 IPO7O95373 1038 aaKnown RBP17.72■□□□□ 0.43
SPRED1-201ENST00000299084 FAM184AQ8NB25 1140 aa17.72■□□□□ 0.43
SPRED1-201ENST00000299084 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
SPRED1-201ENST00000299084 C1orf141Q5JVX7 400 aa17.72■□□□□ 0.43
SPRED1-201ENST00000299084 ZFYVE27Q5T4F4 411 aa17.72■□□□□ 0.43
SPRED1-201ENST00000299084 RBM33Q96EV2 1170 aaKnown RBP17.71■□□□□ 0.43
SPRED1-201ENST00000299084 TRIM29Q14134 588 aa17.71■□□□□ 0.43
SPRED1-201ENST00000299084 RDXP35241 583 aaKnown RBP17.71■□□□□ 0.43
SPRED1-201ENST00000299084 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
SPRED1-201ENST00000299084 ANKRD20A12PQ8NF67 263 aa17.71■□□□□ 0.42
SPRED1-201ENST00000299084 PPM1FP49593 454 aaPredicted RBP17.7■□□□□ 0.42
SPRED1-201ENST00000299084 GPS2Q13227 327 aa17.69■□□□□ 0.42
SPRED1-201ENST00000299084 PPP1R1BQ9UD71 204 aaPredicted RBP17.69■□□□□ 0.42
SPRED1-201ENST00000299084 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
SPRED1-201ENST00000299084 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
SPRED1-201ENST00000299084 GOLGA6L19H0YKK7 550 aa17.67■□□□□ 0.42
SPRED1-201ENST00000299084 ZNF771Q7L3S4 317 aaPredicted RBP17.67■□□□□ 0.42
SPRED1-201ENST00000299084 EPS15P42566 896 aa17.67■□□□□ 0.42
SPRED1-201ENST00000299084 CPLX2Q6PUV4 134 aaKnown RBP17.66■□□□□ 0.42
SPRED1-201ENST00000299084 APPP05067 770 aa17.65■□□□□ 0.42
SPRED1-201ENST00000299084 NOL8Q76FK4 1167 aaKnown RBP17.65■□□□□ 0.42
SPRED1-201ENST00000299084 CCDC97Q96F63 343 aaPredicted RBP17.65■□□□□ 0.42
SPRED1-201ENST00000299084 HOOK1Q9UJC3 728 aaKnown RBP17.65■□□□□ 0.42
SPRED1-201ENST00000299084 HSP90AB2PQ58FF8 381 aa17.65■□□□□ 0.42
SPRED1-201ENST00000299084 SLKQ9H2G2 1235 aaPredicted RBP17.65■□□□□ 0.42
SPRED1-201ENST00000299084 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
SPRED1-201ENST00000299084 NACADO15069 1562 aa17.64■□□□□ 0.41
SPRED1-201ENST00000299084 ERICH2A1L162 156 aa17.64■□□□□ 0.41
SPRED1-201ENST00000299084 TTC5Q8N0Z6 440 aa17.63■□□□□ 0.41
SPRED1-201ENST00000299084 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
SPRED1-201ENST00000299084 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
SPRED1-201ENST00000299084 IKQ13123 557 aaPredicted RBP17.63■□□□□ 0.41
SPRED1-201ENST00000299084 SMC4Q9NTJ3 1288 aa17.63■□□□□ 0.41
SPRED1-201ENST00000299084 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
SPRED1-201ENST00000299084 NAP1L1P55209 391 aaKnown RBP17.62■□□□□ 0.41
SPRED1-201ENST00000299084 GOLGA6L3A6NEY3 463 aa17.62■□□□□ 0.41
SPRED1-201ENST00000299084 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
SPRED1-201ENST00000299084 CDR1P51861 262 aa17.61■□□□□ 0.41
SPRED1-201ENST00000299084 MCTP1Q6DN14 999 aa17.61■□□□□ 0.41
SPRED1-201ENST00000299084 TERF2IPQ9NYB0 399 aa17.61■□□□□ 0.41
SPRED1-201ENST00000299084 ST18O60284 1047 aa17.6■□□□□ 0.41
SPRED1-201ENST00000299084 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
SPRED1-201ENST00000299084 TCERG1O14776 1098 aaKnown RBP17.59■□□□□ 0.41
SPRED1-201ENST00000299084 NEXNQ0ZGT2 675 aa17.59■□□□□ 0.41
SPRED1-201ENST00000299084 MAP7D2Q96T17 732 aa17.58■□□□□ 0.41
SPRED1-201ENST00000299084 BECN2A8MW95 431 aa17.58■□□□□ 0.41
SPRED1-201ENST00000299084 ZRSR2Q15696 482 aaKnown RBP17.58■□□□□ 0.4
SPRED1-201ENST00000299084 RUFY1Q96T51 708 aa17.58■□□□□ 0.4
SPRED1-201ENST00000299084 PMFBP1Q8TBY8 1022 aa17.58■□□□□ 0.4
SPRED1-201ENST00000299084 TRDNQ13061 729 aa17.57■□□□□ 0.4
SPRED1-201ENST00000299084 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
SPRED1-201ENST00000299084 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
SPRED1-201ENST00000299084 CCDC173Q0VFZ6 552 aa17.56■□□□□ 0.4
SPRED1-201ENST00000299084 FOXD4L5Q5VV16 416 aaPredicted RBP17.56■□□□□ 0.4
SPRED1-201ENST00000299084 FOXD4L4Q8WXT5 416 aaPredicted RBP17.56■□□□□ 0.4
SPRED1-201ENST00000299084 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
SPRED1-201ENST00000299084 ZNF592Q92610 1267 aa17.55■□□□□ 0.4
SPRED1-201ENST00000299084 NUTM2FA1L443 756 aa17.55■□□□□ 0.4
SPRED1-201ENST00000299084 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
SPRED1-201ENST00000299084 RILPL2Q969X0 211 aa17.54■□□□□ 0.4
SPRED1-201ENST00000299084 AK7Q96M32 723 aa17.54■□□□□ 0.4
SPRED1-201ENST00000299084 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
SPRED1-201ENST00000299084 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
SPRED1-201ENST00000299084 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
SPRED1-201ENST00000299084 MYO6Q9UM54 1294 aa17.53■□□□□ 0.4
SPRED1-201ENST00000299084 SPDYE4A6NLX3 237 aa17.53■□□□□ 0.4
SPRED1-201ENST00000299084 PLCD4Q9BRC7 762 aa17.52■□□□□ 0.4
SPRED1-201ENST00000299084 CPLX1O14810 134 aa17.52■□□□□ 0.39
SPRED1-201ENST00000299084 TEX35Q5T0J7 233 aa17.52■□□□□ 0.39
SPRED1-201ENST00000299084 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
SPRED1-201ENST00000299084 ATP6V1DQ9Y5K8 247 aa17.51■□□□□ 0.39
SPRED1-201ENST00000299084 GOLGA3Q08378 1498 aa17.51■□□□□ 0.39
SPRED1-201ENST00000299084 HOMER1Q86YM7 354 aa17.51■□□□□ 0.39
SPRED1-201ENST00000299084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.51■□□□□ 0.393e-6■■■□□ 16.1
SPRED1-201ENST00000299084 TEFQ10587 303 aa17.51■□□□□ 0.39
SPRED1-201ENST00000299084 OFD1O75665 1012 aa17.5■□□□□ 0.39
SPRED1-201ENST00000299084 C9orf78Q9NZ63 289 aaPredicted RBP17.5■□□□□ 0.39
SPRED1-201ENST00000299084 CCDC27Q2M243 656 aa17.5■□□□□ 0.39
SPRED1-201ENST00000299084 FYB1O15117 783 aa17.49■□□□□ 0.39
SPRED1-201ENST00000299084 TMEM87AQ8NBN3 555 aa17.49■□□□□ 0.39
SPRED1-201ENST00000299084 BRMS1Q9HCU9 246 aa17.48■□□□□ 0.39
SPRED1-201ENST00000299084 SYCP1Q15431 976 aa17.48■□□□□ 0.39
SPRED1-201ENST00000299084 CCDC191Q8NCU4 936 aa17.48■□□□□ 0.39
SPRED1-201ENST00000299084 SAFBQ15424 915 aaKnown RBP eCLIP17.46■□□□□ 0.39
SPRED1-201ENST00000299084 ROCK2O75116 1388 aaKnown RBP17.46■□□□□ 0.39
SPRED1-201ENST00000299084 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
SPRED1-201ENST00000299084 WDR70Q9NW82 654 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms