RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 FTSJ3Q8IY81 847 aaKnown RBP21.23■□□□□ 0.99
SBSPON-201ENST00000297354 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
SBSPON-201ENST00000297354 MAP3K1Q13233 1512 aa21.23■□□□□ 0.99
SBSPON-201ENST00000297354 ESPNB1AK53 854 aa21.21■□□□□ 0.99
SBSPON-201ENST00000297354 NUP155O75694 1391 aa21.21■□□□□ 0.99
SBSPON-201ENST00000297354 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
SBSPON-201ENST00000297354 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
SBSPON-201ENST00000297354 PLEKHG5O94827 1062 aa21.21■□□□□ 0.99
SBSPON-201ENST00000297354 RRP9O43818 475 aaKnown RBP21.2■□□□□ 0.98
SBSPON-201ENST00000297354 NBPF1Q3BBV0 1214 aa21.19■□□□□ 0.98
SBSPON-201ENST00000297354 PCF11O94913 1555 aaKnown RBP21.19■□□□□ 0.98
SBSPON-201ENST00000297354 PTMAP06454 111 aaKnown RBP21.18■□□□□ 0.98
SBSPON-201ENST00000297354 IGHDP01880 384 aa21.18■□□□□ 0.98
SBSPON-201ENST00000297354 MCM4P33991 863 aa21.18■□□□□ 0.98
SBSPON-201ENST00000297354 TMF1P82094 1093 aa21.17■□□□□ 0.98
SBSPON-201ENST00000297354 DHX29Q7Z478 1369 aaKnown RBP21.16■□□□□ 0.98
SBSPON-201ENST00000297354 R3HCC1Q9Y3T6 440 aaKnown RBP21.16■□□□□ 0.98
SBSPON-201ENST00000297354 GOLGA6L22H0YM25 854 aa21.15■□□□□ 0.98
SBSPON-201ENST00000297354 KIAA1211Q6ZU35 1233 aa21.15■□□□□ 0.98
SBSPON-201ENST00000297354 GRPEL1Q9HAV7 217 aa21.15■□□□□ 0.98
SBSPON-201ENST00000297354 MRE11P49959 708 aa21.14■□□□□ 0.98
SBSPON-201ENST00000297354 TBC1D2Q9BYX2 928 aa21.14■□□□□ 0.98
SBSPON-201ENST00000297354 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.97
SBSPON-201ENST00000297354 CENPJQ9HC77 1338 aaPredicted RBP21.13■□□□□ 0.97
SBSPON-201ENST00000297354 FOXD4L5Q5VV16 416 aaPredicted RBP21.13■□□□□ 0.97
SBSPON-201ENST00000297354 FOXD4L4Q8WXT5 416 aaPredicted RBP21.13■□□□□ 0.97
SBSPON-201ENST00000297354 PRDM10Q9NQV6 1147 aa21.13■□□□□ 0.97
SBSPON-201ENST00000297354 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
SBSPON-201ENST00000297354 PLCB2Q00722 1185 aa21.12■□□□□ 0.97
SBSPON-201ENST00000297354 MPNDQ8N594 471 aa21.12■□□□□ 0.97
SBSPON-201ENST00000297354 CHMP5Q9NZZ3 219 aa21.12■□□□□ 0.97
SBSPON-201ENST00000297354 PTPN23Q9H3S7 1636 aa21.12■□□□□ 0.97
SBSPON-201ENST00000297354 ANKRD30BQ9BXX2 1392 aa21.1■□□□□ 0.97
SBSPON-201ENST00000297354 C22orf23Q9BZE7 217 aa21.09■□□□□ 0.97
SBSPON-201ENST00000297354 MAPK8IP3Q9UPT6 1336 aa21.09■□□□□ 0.97
SBSPON-201ENST00000297354 DDX49Q9Y6V7 483 aaKnown RBP21.08■□□□□ 0.97
SBSPON-201ENST00000297354 GBP4Q96PP9 640 aa21.08■□□□□ 0.96
SBSPON-201ENST00000297354 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.96
SBSPON-201ENST00000297354 RAD54L2Q9Y4B4 1467 aa21.07■□□□□ 0.96
SBSPON-201ENST00000297354 CLCN1P35523 988 aa21.07■□□□□ 0.96
SBSPON-201ENST00000297354 FGD5Q6ZNL6 1462 aa21.07■□□□□ 0.96
SBSPON-201ENST00000297354 CHGAP10645 457 aaKnown RBP21.06■□□□□ 0.96
SBSPON-201ENST00000297354 ITPRIPQ8IWB1 547 aa21.05■□□□□ 0.96
SBSPON-201ENST00000297354 RWDD1Q9H446 243 aaPredicted RBP21.05■□□□□ 0.96
SBSPON-201ENST00000297354 FOXD4L6Q3SYB3 417 aaPredicted RBP21.05■□□□□ 0.96
SBSPON-201ENST00000297354 DUSP27Q5VZP5 1158 aa21.05■□□□□ 0.96
SBSPON-201ENST00000297354 FOXD4L3Q6VB84 417 aaPredicted RBP21.05■□□□□ 0.96
SBSPON-201ENST00000297354 DDX11L8A8MPP1 907 aa21.04■□□□□ 0.96
SBSPON-201ENST00000297354 ZHX1Q9UKY1 873 aaPredicted RBP21.03■□□□□ 0.96
SBSPON-201ENST00000297354 BIVM-ERCC5R4GMW8 1640 aa21.02■□□□□ 0.96
SBSPON-201ENST00000297354 FYCO1Q9BQS8 1478 aa21.02■□□□□ 0.96
SBSPON-201ENST00000297354 PMFBP1Q8TBY8 1022 aa21.02■□□□□ 0.96
SBSPON-201ENST00000297354 NASPP49321 788 aaPredicted RBP21.01■□□□□ 0.95
SBSPON-201ENST00000297354 CGNL1Q0VF96 1302 aa21.01■□□□□ 0.95
SBSPON-201ENST00000297354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.01■□□□□ 0.95
SBSPON-201ENST00000297354 APBB1O00213 710 aa21.01■□□□□ 0.95
SBSPON-201ENST00000297354 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
SBSPON-201ENST00000297354 TNNQ9UQP3 1299 aa20.99■□□□□ 0.95
SBSPON-201ENST00000297354 KDM2BQ8NHM5 1336 aa20.98■□□□□ 0.95
SBSPON-201ENST00000297354 PPP2R1AP30153 589 aa20.98■□□□□ 0.95
SBSPON-201ENST00000297354 SPINK5Q9NQ38 1064 aaPredicted RBP20.98■□□□□ 0.95
SBSPON-201ENST00000297354 HNRNPMP52272 730 aaKnown RBP eCLIP20.98■□□□□ 0.95
SBSPON-201ENST00000297354 RNF214Q8ND24 703 aa20.97■□□□□ 0.95
SBSPON-201ENST00000297354 BCL11BQ9C0K0 894 aaPredicted RBP20.97■□□□□ 0.95
SBSPON-201ENST00000297354 LNPKQ9C0E8 428 aa20.97■□□□□ 0.95
SBSPON-201ENST00000297354 U2SURPO15042 1029 aaKnown RBP20.96■□□□□ 0.95
SBSPON-201ENST00000297354 E9PSI1 815 aa20.95■□□□□ 0.94
SBSPON-201ENST00000297354 XPCQ01831 940 aaPredicted RBP20.95■□□□□ 0.94
SBSPON-201ENST00000297354 CALD1Q05682 793 aaKnown RBP20.95■□□□□ 0.94
SBSPON-201ENST00000297354 RPRD2Q5VT52 1461 aaKnown RBP20.95■□□□□ 0.94
SBSPON-201ENST00000297354 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
SBSPON-201ENST00000297354 SMC4Q9NTJ3 1288 aa20.94■□□□□ 0.94
SBSPON-201ENST00000297354 NOL8Q76FK4 1167 aaKnown RBP20.93■□□□□ 0.94
SBSPON-201ENST00000297354 SLFN5Q08AF3 891 aa20.93■□□□□ 0.94
SBSPON-201ENST00000297354 MIA2Q96PC5 1412 aa20.92■□□□□ 0.94
SBSPON-201ENST00000297354 TPM2P07951 284 aa20.92■□□□□ 0.94
SBSPON-201ENST00000297354 CAVIN1Q6NZI2 390 aaKnown RBP20.92■□□□□ 0.94
SBSPON-201ENST00000297354 MCTP1Q6DN14 999 aa20.92■□□□□ 0.94
SBSPON-201ENST00000297354 NESP48681 1621 aa20.91■□□□□ 0.94
SBSPON-201ENST00000297354 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
SBSPON-201ENST00000297354 PDCL3Q9H2J4 239 aa20.9■□□□□ 0.94
SBSPON-201ENST00000297354 PLEKHH1Q9ULM0 1364 aa20.9■□□□□ 0.94
SBSPON-201ENST00000297354 U2AF1L5P0DN76 240 aaPredicted RBP20.89■□□□□ 0.93
SBSPON-201ENST00000297354 U2AF1Q01081 240 aaKnown RBP eCLIP20.89■□□□□ 0.93
SBSPON-201ENST00000297354 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.93
SBSPON-201ENST00000297354 PCDHB15Q9Y5E8 787 aa20.89■□□□□ 0.93
SBSPON-201ENST00000297354 UQCRHLA0A096LP55 91 aa20.88■□□□□ 0.93
SBSPON-201ENST00000297354 UQCRHP07919 91 aa20.88■□□□□ 0.93
SBSPON-201ENST00000297354 MAPK8IP2Q13387 824 aaPredicted RBP20.88■□□□□ 0.93
SBSPON-201ENST00000297354 TBC1D32Q96NH3 1257 aa20.88■□□□□ 0.93
SBSPON-201ENST00000297354 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
SBSPON-201ENST00000297354 MORC1Q86VD1 984 aa20.88■□□□□ 0.93
SBSPON-201ENST00000297354 ERBB4Q15303 1308 aa20.87■□□□□ 0.93
SBSPON-201ENST00000297354 TNPO1Q92973 898 aaKnown RBP20.87■□□□□ 0.93
SBSPON-201ENST00000297354 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.87■□□□□ 0.93
SBSPON-201ENST00000297354 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
SBSPON-201ENST00000297354 ANKRD30AQ9BXX3 1397 aa20.85■□□□□ 0.93
SBSPON-201ENST00000297354 SPATA31E1Q6ZUB1 1445 aa20.85■□□□□ 0.93
SBSPON-201ENST00000297354 ANKRD45Q5TZF3 282 aa20.85■□□□□ 0.93
SBSPON-201ENST00000297354 ELL2O00472 640 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms