RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
TNFRSF11B-201ENST00000297350 PLCH2O75038 1416 aa13.75□□□□□ -0.21
TNFRSF11B-201ENST00000297350 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
TNFRSF11B-201ENST00000297350 DHX29Q7Z478 1369 aaKnown RBP13.73□□□□□ -0.21
TNFRSF11B-201ENST00000297350 DUOX2Q9NRD8 1548 aa13.73□□□□□ -0.21
TNFRSF11B-201ENST00000297350 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
TNFRSF11B-201ENST00000297350 MAGI2Q86UL8 1455 aa13.73□□□□□ -0.21
TNFRSF11B-201ENST00000297350 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
TNFRSF11B-201ENST00000297350 ATP10AO60312 1499 aa13.72□□□□□ -0.21
TNFRSF11B-201ENST00000297350 ERBINQ96RT1 1412 aa13.71□□□□□ -0.21
TNFRSF11B-201ENST00000297350 MRS2Q9HD23 443 aa13.71□□□□□ -0.21
TNFRSF11B-201ENST00000297350 E9PCH4 1651 aa13.71□□□□□ -0.21
TNFRSF11B-201ENST00000297350 TRPM1Q7Z4N2 1603 aa13.7□□□□□ -0.22
TNFRSF11B-201ENST00000297350 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
TNFRSF11B-201ENST00000297350 HNRNPMP52272 730 aaKnown RBP eCLIP13.69□□□□□ -0.22
TNFRSF11B-201ENST00000297350 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
TNFRSF11B-201ENST00000297350 CFAP74Q9C0B2 1584 aa13.67□□□□□ -0.22
TNFRSF11B-201ENST00000297350 PRAG1Q86YV5 1406 aa13.67□□□□□ -0.22
TNFRSF11B-201ENST00000297350 CARD11Q9BXL7 1154 aa13.66□□□□□ -0.22
TNFRSF11B-201ENST00000297350 BCANQ96GW7 911 aa13.65□□□□□ -0.22
TNFRSF11B-201ENST00000297350 ASXL2Q76L83 1435 aa13.65□□□□□ -0.22
TNFRSF11B-201ENST00000297350 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
TNFRSF11B-201ENST00000297350 INO80Q9ULG1 1556 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF11B-201ENST00000297350 PRDM15P57071 1507 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF11B-201ENST00000297350 ZFYVE16Q7Z3T8 1539 aa13.63□□□□□ -0.23
TNFRSF11B-201ENST00000297350 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
TNFRSF11B-201ENST00000297350 RALBP1Q15311 655 aa13.62□□□□□ -0.23
TNFRSF11B-201ENST00000297350 BRD4O60885 1362 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF11B-201ENST00000297350 CCDC184Q52MB2 194 aa13.62□□□□□ -0.23
TNFRSF11B-201ENST00000297350 ZNF326Q5BKZ1 582 aaKnown RBP13.62□□□□□ -0.23
TNFRSF11B-201ENST00000297350 EFCAB2Q5VUJ9 269 aa13.62□□□□□ -0.23
TNFRSF11B-201ENST00000297350 PPP4R2Q9NY27 417 aa13.62□□□□□ -0.23
TNFRSF11B-201ENST00000297350 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
TNFRSF11B-201ENST00000297350 FAM9BQ8IZU0 186 aa13.61□□□□□ -0.23
TNFRSF11B-201ENST00000297350 ZMYM4Q5VZL5 1548 aa13.61□□□□□ -0.23
TNFRSF11B-201ENST00000297350 PLA2R1Q13018 1463 aa13.61□□□□□ -0.23
TNFRSF11B-201ENST00000297350 WASHC2CQ9Y4E1 1318 aa13.6□□□□□ -0.23
TNFRSF11B-201ENST00000297350 FANCAO15360 1455 aa13.6□□□□□ -0.23
TNFRSF11B-201ENST00000297350 A2MP01023 1474 aa13.6□□□□□ -0.23
TNFRSF11B-201ENST00000297350 INSRP06213 1382 aa13.6□□□□□ -0.23
TNFRSF11B-201ENST00000297350 DCAF11Q8TEB1 546 aa13.6□□□□□ -0.23
TNFRSF11B-201ENST00000297350 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
TNFRSF11B-201ENST00000297350 NEURL4Q96JN8 1562 aa13.59□□□□□ -0.23
TNFRSF11B-201ENST00000297350 DEPDC5O75140 1603 aa13.59□□□□□ -0.23
TNFRSF11B-201ENST00000297350 COL17A1Q9UMD9 1497 aaPredicted RBP13.58□□□□□ -0.23
TNFRSF11B-201ENST00000297350 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.24
TNFRSF11B-201ENST00000297350 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.24
TNFRSF11B-201ENST00000297350 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.24
TNFRSF11B-201ENST00000297350 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
TNFRSF11B-201ENST00000297350 TRPM2O94759 1503 aa13.56□□□□□ -0.24
TNFRSF11B-201ENST00000297350 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
TNFRSF11B-201ENST00000297350 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
TNFRSF11B-201ENST00000297350 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
TNFRSF11B-201ENST00000297350 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
TNFRSF11B-201ENST00000297350 TET3O43151 1660 aa13.55□□□□□ -0.24
TNFRSF11B-201ENST00000297350 CEP152O94986 1710 aa13.55□□□□□ -0.24
TNFRSF11B-201ENST00000297350 PNISRQ8TF01 805 aaKnown RBP13.54□□□□□ -0.24
TNFRSF11B-201ENST00000297350 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
TNFRSF11B-201ENST00000297350 RNF123Q5XPI4 1314 aa13.54□□□□□ -0.24
TNFRSF11B-201ENST00000297350 ADGRL1O94910 1474 aa13.54□□□□□ -0.24
TNFRSF11B-201ENST00000297350 GLI2P10070 1586 aa13.54□□□□□ -0.24
TNFRSF11B-201ENST00000297350 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
TNFRSF11B-201ENST00000297350 SPHKAPQ2M3C7 1700 aa13.54□□□□□ -0.24
TNFRSF11B-201ENST00000297350 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
TNFRSF11B-201ENST00000297350 RBM19Q9Y4C8 960 aaKnown RBP13.53□□□□□ -0.24
TNFRSF11B-201ENST00000297350 MAP3K4Q9Y6R4 1608 aa13.53□□□□□ -0.24
TNFRSF11B-201ENST00000297350 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
TNFRSF11B-201ENST00000297350 KIAA1210Q9ULL0 1709 aa13.52□□□□□ -0.24
TNFRSF11B-201ENST00000297350 MADDQ8WXG6 1647 aa13.52□□□□□ -0.25
TNFRSF11B-201ENST00000297350 PTPRTO14522 1441 aa13.52□□□□□ -0.25
TNFRSF11B-201ENST00000297350 IQGAP1P46940 1657 aa13.52□□□□□ -0.25
TNFRSF11B-201ENST00000297350 VWDEQ8N2E2 1590 aa13.51□□□□□ -0.25
TNFRSF11B-201ENST00000297350 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
TNFRSF11B-201ENST00000297350 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
TNFRSF11B-201ENST00000297350 ZNF518AQ6AHZ1 1483 aa13.51□□□□□ -0.25
TNFRSF11B-201ENST00000297350 NLRP13Q86W25 1043 aa13.51□□□□□ -0.25
TNFRSF11B-201ENST00000297350 NEO1Q92859 1461 aa13.5□□□□□ -0.25
TNFRSF11B-201ENST00000297350 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
TNFRSF11B-201ENST00000297350 SCAPERQ9BY12 1400 aa13.5□□□□□ -0.25
TNFRSF11B-201ENST00000297350 FANCIQ9NVI1 1328 aa13.5□□□□□ -0.25
TNFRSF11B-201ENST00000297350 ANP32EQ9BTT0 268 aa13.49□□□□□ -0.25
TNFRSF11B-201ENST00000297350 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
TNFRSF11B-201ENST00000297350 HECW2Q9P2P5 1572 aa13.48□□□□□ -0.25
TNFRSF11B-201ENST00000297350 PDE3BQ13370 1112 aa13.48□□□□□ -0.25
TNFRSF11B-201ENST00000297350 CD109Q6YHK3 1445 aa13.48□□□□□ -0.25
TNFRSF11B-201ENST00000297350 POGZQ7Z3K3 1410 aa13.48□□□□□ -0.25
TNFRSF11B-201ENST00000297350 KANK1Q14678 1352 aa13.48□□□□□ -0.25
TNFRSF11B-201ENST00000297350 MROH1Q8NDA8 1641 aa13.47□□□□□ -0.25
TNFRSF11B-201ENST00000297350 TMF1P82094 1093 aa13.47□□□□□ -0.25
TNFRSF11B-201ENST00000297350 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
TNFRSF11B-201ENST00000297350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
TNFRSF11B-201ENST00000297350 TESK2Q96S53 571 aa13.46□□□□□ -0.25
TNFRSF11B-201ENST00000297350 SYNMO15061 1565 aa13.46□□□□□ -0.25
TNFRSF11B-201ENST00000297350 MLH3Q9UHC1 1453 aa13.46□□□□□ -0.26
TNFRSF11B-201ENST00000297350 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
TNFRSF11B-201ENST00000297350 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
TNFRSF11B-201ENST00000297350 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
TNFRSF11B-201ENST00000297350 DIP2BQ9P265 1576 aa13.44□□□□□ -0.26
TNFRSF11B-201ENST00000297350 SCAF11Q99590 1463 aaKnown RBP13.44□□□□□ -0.26
TNFRSF11B-201ENST00000297350 PER1O15534 1290 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms