RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 RSPH4AQ5TD94 716 aa16.27■□□□□ 0.2
RHO-201ENST00000296271 PLCH2O75038 1416 aa16.26■□□□□ 0.19
RHO-201ENST00000296271 DHX29Q7Z478 1369 aaKnown RBP16.26■□□□□ 0.19
RHO-201ENST00000296271 EFCAB2Q5VUJ9 269 aa16.25■□□□□ 0.19
RHO-201ENST00000296271 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
RHO-201ENST00000296271 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
RHO-201ENST00000296271 CCDC144AA2RUR9 1427 aa16.23■□□□□ 0.19
RHO-201ENST00000296271 POLR1AO95602 1720 aaPredicted RBP16.23■□□□□ 0.19
RHO-201ENST00000296271 ROCK2O75116 1388 aaKnown RBP16.22■□□□□ 0.19
RHO-201ENST00000296271 MAST1Q9Y2H9 1570 aa16.21■□□□□ 0.18
RHO-201ENST00000296271 TSHZ2Q9NRE2 1034 aa16.2■□□□□ 0.18
RHO-201ENST00000296271 NEFLP07196 543 aa16.2■□□□□ 0.18
RHO-201ENST00000296271 UNC13BO14795 1591 aa16.19■□□□□ 0.18
RHO-201ENST00000296271 UHRF1BP1LA0JNW5 1464 aa16.19■□□□□ 0.18
RHO-201ENST00000296271 A2MP01023 1474 aa16.18■□□□□ 0.18
RHO-201ENST00000296271 ABCC1P33527 1531 aa16.18■□□□□ 0.18
RHO-201ENST00000296271 SPAG9O60271 1321 aaKnown RBP16.18■□□□□ 0.18
RHO-201ENST00000296271 MYT1LQ9UL68 1186 aa16.17■□□□□ 0.18
RHO-201ENST00000296271 PRAG1Q86YV5 1406 aa16.17■□□□□ 0.18
RHO-201ENST00000296271 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
RHO-201ENST00000296271 DUOX2Q9NRD8 1548 aa16.16■□□□□ 0.18
RHO-201ENST00000296271 IQGAP3Q86VI3 1631 aa16.15■□□□□ 0.18
RHO-201ENST00000296271 TRPM1Q7Z4N2 1603 aa16.12■□□□□ 0.17
RHO-201ENST00000296271 WDR7Q9Y4E6 1490 aa16.12■□□□□ 0.17
RHO-201ENST00000296271 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
RHO-201ENST00000296271 SCAPERQ9BY12 1400 aa16.1■□□□□ 0.17
RHO-201ENST00000296271 FANCAO15360 1455 aa16.1■□□□□ 0.17
RHO-201ENST00000296271 KIF3BO15066 747 aa16.1■□□□□ 0.17
RHO-201ENST00000296271 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
RHO-201ENST00000296271 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
RHO-201ENST00000296271 ZFYVE16Q7Z3T8 1539 aa16.09■□□□□ 0.17
RHO-201ENST00000296271 ASXL2Q76L83 1435 aa16.08■□□□□ 0.16
RHO-201ENST00000296271 TESK2Q96S53 571 aa16.08■□□□□ 0.16
RHO-201ENST00000296271 E9PCH4 1651 aa16.07■□□□□ 0.16
RHO-201ENST00000296271 ZBED9Q6R2W3 1325 aa16.07■□□□□ 0.16
RHO-201ENST00000296271 ARID4BQ4LE39 1312 aaPredicted RBP16.07■□□□□ 0.16
RHO-201ENST00000296271 TMC1Q8TDI8 760 aa16.06■□□□□ 0.16
RHO-201ENST00000296271 PNISRQ8TF01 805 aaKnown RBP16.06■□□□□ 0.16
RHO-201ENST00000296271 ADGRL1O94910 1474 aa16.05■□□□□ 0.16
RHO-201ENST00000296271 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
RHO-201ENST00000296271 ATP10AO60312 1499 aa16.04■□□□□ 0.16
RHO-201ENST00000296271 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
RHO-201ENST00000296271 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
RHO-201ENST00000296271 ATP7AQ04656 1500 aa16.02■□□□□ 0.16
RHO-201ENST00000296271 GPRASP1Q5JY77 1395 aa16.02■□□□□ 0.16
RHO-201ENST00000296271 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.15
RHO-201ENST00000296271 OSCARQ8IYS5 282 aa16.02■□□□□ 0.15
RHO-201ENST00000296271 ABCA9Q8IUA7 1624 aa16.02■□□□□ 0.15
RHO-201ENST00000296271 PANK3Q9H999 370 aa16.01■□□□□ 0.15
RHO-201ENST00000296271 RTEL1-TNFRSF6BF6WH68 1400 aa16.01■□□□□ 0.15
RHO-201ENST00000296271 PRDM15P57071 1507 aaPredicted RBP16■□□□□ 0.15
RHO-201ENST00000296271 CLTCL1P53675 1640 aa15.99■□□□□ 0.15
RHO-201ENST00000296271 INO80Q9ULG1 1556 aaPredicted RBP15.98■□□□□ 0.15
RHO-201ENST00000296271 MYBBP1AQ9BQG0 1328 aaKnown RBP15.98■□□□□ 0.15
RHO-201ENST00000296271 B4GALNT3Q6L9W6 998 aa15.97■□□□□ 0.15
RHO-201ENST00000296271 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
RHO-201ENST00000296271 ARAP3Q8WWN8 1544 aa15.97■□□□□ 0.15
RHO-201ENST00000296271 CFAP65Q6ZU64 1925 aaKnown RBP15.96■□□□□ 0.15
RHO-201ENST00000296271 NPM1P06748 294 aaKnown RBP eCLIP15.95■□□□□ 0.14
RHO-201ENST00000296271 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
RHO-201ENST00000296271 PTPRTO14522 1441 aa15.95■□□□□ 0.14
RHO-201ENST00000296271 TRPM2O94759 1503 aa15.95■□□□□ 0.14
RHO-201ENST00000296271 DEPDC5O75140 1603 aa15.94■□□□□ 0.14
RHO-201ENST00000296271 MROH1Q8NDA8 1641 aa15.94■□□□□ 0.14
RHO-201ENST00000296271 TMF1P82094 1093 aa15.94■□□□□ 0.14
RHO-201ENST00000296271 CFAP70Q5T0N1 1121 aa15.94■□□□□ 0.14
RHO-201ENST00000296271 GGT6Q6P531 493 aa15.94■□□□□ 0.14
RHO-201ENST00000296271 SENP3Q9H4L4 574 aaPredicted RBP15.94■□□□□ 0.14
RHO-201ENST00000296271 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
RHO-201ENST00000296271 RALBP1Q15311 655 aa15.94■□□□□ 0.14
RHO-201ENST00000296271 ADGRF5Q8IZF2 1346 aa15.94■□□□□ 0.14
RHO-201ENST00000296271 KIDINS220Q9ULH0 1771 aa15.94■□□□□ 0.14
RHO-201ENST00000296271 RAPGEF3O95398 923 aa15.93■□□□□ 0.14
RHO-201ENST00000296271 KTN1Q86UP2 1357 aaKnown RBP15.93■□□□□ 0.14
RHO-201ENST00000296271 KANK1Q14678 1352 aa15.93■□□□□ 0.14
RHO-201ENST00000296271 PARD3Q8TEW0 1356 aa15.93■□□□□ 0.14
RHO-201ENST00000296271 CHGAP10645 457 aaKnown RBP15.92■□□□□ 0.14
RHO-201ENST00000296271 BRD4O60885 1362 aaPredicted RBP15.92■□□□□ 0.14
RHO-201ENST00000296271 RBM19Q9Y4C8 960 aaKnown RBP15.91■□□□□ 0.14
RHO-201ENST00000296271 LRPPRCP42704 1394 aaKnown RBP15.91■□□□□ 0.14
RHO-201ENST00000296271 EIF2AK4Q9P2K8 1649 aaKnown RBP15.91■□□□□ 0.14
RHO-201ENST00000296271 TET3O43151 1660 aa15.91■□□□□ 0.14
RHO-201ENST00000296271 CD109Q6YHK3 1445 aa15.91■□□□□ 0.14
RHO-201ENST00000296271 RNF17Q9BXT8 1623 aaKnown RBP15.91■□□□□ 0.14
RHO-201ENST00000296271 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
RHO-201ENST00000296271 CEP152O94986 1710 aa15.91■□□□□ 0.14
RHO-201ENST00000296271 VWDEQ8N2E2 1590 aa15.91■□□□□ 0.14
RHO-201ENST00000296271 NLRP13Q86W25 1043 aa15.9■□□□□ 0.14
RHO-201ENST00000296271 SMG6Q86US8 1419 aaKnown RBP15.9■□□□□ 0.14
RHO-201ENST00000296271 LAMC1P11047 1609 aa15.89■□□□□ 0.13
RHO-201ENST00000296271 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
RHO-201ENST00000296271 PPP4R2Q9NY27 417 aa15.88■□□□□ 0.13
RHO-201ENST00000296271 CDCA7LQ96GN5 454 aa15.87■□□□□ 0.13
RHO-201ENST00000296271 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
RHO-201ENST00000296271 IQGAP1P46940 1657 aa15.86■□□□□ 0.13
RHO-201ENST00000296271 ZNF518AQ6AHZ1 1483 aa15.85■□□□□ 0.13
RHO-201ENST00000296271 MROH2AA6NES4 1674 aa15.85■□□□□ 0.13
RHO-201ENST00000296271 FRMPD1Q5SYB0 1578 aa15.84■□□□□ 0.13
RHO-201ENST00000296271 SCAF11Q99590 1463 aaKnown RBP15.84■□□□□ 0.13
RHO-201ENST00000296271 EFCAB6Q5THR3 1501 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms