RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 MRS2Q9HD23 443 aa16.32■□□□□ 0.2
CLPB-201ENST00000294053 PRKRIP1Q9H875 184 aaPredicted RBP16.32■□□□□ 0.2
CLPB-201ENST00000294053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.32■□□□□ 0.2
CLPB-201ENST00000294053 TTC37Q6PGP7 1564 aa16.32■□□□□ 0.2
CLPB-201ENST00000294053 SYCP2Q9BX26 1530 aa16.3■□□□□ 0.2
CLPB-201ENST00000294053 USP47Q96K76 1375 aa16.3■□□□□ 0.2
CLPB-201ENST00000294053 BCORL1Q5H9F3 1711 aa16.29■□□□□ 0.2
CLPB-201ENST00000294053 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
CLPB-201ENST00000294053 DCAF11Q8TEB1 546 aa16.28■□□□□ 0.2
CLPB-201ENST00000294053 ARHGAP5Q13017 1502 aa16.27■□□□□ 0.2
CLPB-201ENST00000294053 ABCC2Q92887 1545 aa16.27■□□□□ 0.2
CLPB-201ENST00000294053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.27■□□□□ 0.19
CLPB-201ENST00000294053 RGL3Q3MIN7 710 aa16.26■□□□□ 0.19
CLPB-201ENST00000294053 PREX2Q70Z35 1606 aa16.26■□□□□ 0.19
CLPB-201ENST00000294053 CCDC141Q6ZP82 1450 aa16.26■□□□□ 0.19
CLPB-201ENST00000294053 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
CLPB-201ENST00000294053 CARD11Q9BXL7 1154 aa16.24■□□□□ 0.19
CLPB-201ENST00000294053 NEFMP07197 916 aa16.23■□□□□ 0.19
CLPB-201ENST00000294053 IPO9Q96P70 1041 aaKnown RBP16.23■□□□□ 0.19
CLPB-201ENST00000294053 ARHGEF5Q12774 1597 aa16.23■□□□□ 0.19
CLPB-201ENST00000294053 UHRF1BP1LA0JNW5 1464 aa16.22■□□□□ 0.19
CLPB-201ENST00000294053 ST20-MTHFSA0A0A6YYL1 179 aa16.21■□□□□ 0.19
CLPB-201ENST00000294053 ARHGEF12Q9NZN5 1544 aa16.21■□□□□ 0.19
CLPB-201ENST00000294053 FAM135AQ9P2D6 1515 aa16.21■□□□□ 0.19
CLPB-201ENST00000294053 KDM5CP41229 1560 aa16.2■□□□□ 0.18
CLPB-201ENST00000294053 PLEKHH2Q8IVE3 1493 aa16.2■□□□□ 0.18
CLPB-201ENST00000294053 DHX29Q7Z478 1369 aaKnown RBP16.19■□□□□ 0.18
CLPB-201ENST00000294053 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
CLPB-201ENST00000294053 ZCCHC11Q5TAX3 1644 aaKnown RBP16.18■□□□□ 0.18
CLPB-201ENST00000294053 POLR1AO95602 1720 aaPredicted RBP16.18■□□□□ 0.18
CLPB-201ENST00000294053 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
CLPB-201ENST00000294053 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
CLPB-201ENST00000294053 RALGAPBQ86X10 1494 aa16.15■□□□□ 0.18
CLPB-201ENST00000294053 MYO5CQ9NQX4 1742 aa16.15■□□□□ 0.18
CLPB-201ENST00000294053 UHRF1BP1Q6BDS2 1440 aa16.15■□□□□ 0.18
CLPB-201ENST00000294053 AFAP1Q8N556 730 aa16.14■□□□□ 0.17
CLPB-201ENST00000294053 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
CLPB-201ENST00000294053 CCDC144AA2RUR9 1427 aa16.14■□□□□ 0.17
CLPB-201ENST00000294053 ERICH6BQ5W0A0 696 aa16.13■□□□□ 0.17
CLPB-201ENST00000294053 TRAPPC8Q9Y2L5 1435 aa16.13■□□□□ 0.17
CLPB-201ENST00000294053 RSPH4AQ5TD94 716 aa16.13■□□□□ 0.17
CLPB-201ENST00000294053 BRPF3Q9ULD4 1205 aa16.1■□□□□ 0.17
CLPB-201ENST00000294053 PLCH2O75038 1416 aa16.09■□□□□ 0.17
CLPB-201ENST00000294053 EFCAB2Q5VUJ9 269 aa16.09■□□□□ 0.17
CLPB-201ENST00000294053 A2MP01023 1474 aa16.08■□□□□ 0.16
CLPB-201ENST00000294053 PRAG1Q86YV5 1406 aa16.07■□□□□ 0.16
CLPB-201ENST00000294053 UNC13BO14795 1591 aa16.07■□□□□ 0.16
CLPB-201ENST00000294053 MAST1Q9Y2H9 1570 aa16.06■□□□□ 0.16
CLPB-201ENST00000294053 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
CLPB-201ENST00000294053 SLC4A3P48751 1232 aa16.05■□□□□ 0.16
CLPB-201ENST00000294053 PLXNC1O60486 1568 aa16.04■□□□□ 0.16
CLPB-201ENST00000294053 DAXXQ9UER7 740 aaPredicted RBP16.04■□□□□ 0.16
CLPB-201ENST00000294053 ABCC1P33527 1531 aa16.03■□□□□ 0.16
CLPB-201ENST00000294053 TRPM1Q7Z4N2 1603 aa16.03■□□□□ 0.16
CLPB-201ENST00000294053 SPAG9O60271 1321 aaKnown RBP16.03■□□□□ 0.16
CLPB-201ENST00000294053 IQGAP3Q86VI3 1631 aa16.02■□□□□ 0.16
CLPB-201ENST00000294053 DUOX2Q9NRD8 1548 aa16.02■□□□□ 0.16
CLPB-201ENST00000294053 SKAP1Q86WV1 359 aa16.02■□□□□ 0.16
CLPB-201ENST00000294053 TMC1Q8TDI8 760 aa16.02■□□□□ 0.16
CLPB-201ENST00000294053 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
CLPB-201ENST00000294053 DISP3Q9P2K9 1392 aa16.01■□□□□ 0.15
CLPB-201ENST00000294053 PNISRQ8TF01 805 aaKnown RBP16■□□□□ 0.15
CLPB-201ENST00000294053 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
CLPB-201ENST00000294053 ERBINQ96RT1 1412 aa15.99■□□□□ 0.15
CLPB-201ENST00000294053 TESK2Q96S53 571 aa15.98■□□□□ 0.15
CLPB-201ENST00000294053 ASXL2Q76L83 1435 aa15.98■□□□□ 0.15
CLPB-201ENST00000294053 CC2D1BQ5T0F9 858 aaKnown RBP15.97■□□□□ 0.15
CLPB-201ENST00000294053 ARXQ96QS3 562 aa15.97■□□□□ 0.15
CLPB-201ENST00000294053 MAGI2Q86UL8 1455 aa15.97■□□□□ 0.15
CLPB-201ENST00000294053 PDE4AP27815 886 aa15.96■□□□□ 0.14
CLPB-201ENST00000294053 EXOC6Q8TAG9 804 aa15.96■□□□□ 0.14
CLPB-201ENST00000294053 NUDCQ9Y266 331 aa15.96■□□□□ 0.14
CLPB-201ENST00000294053 KIF3BO15066 747 aa15.95■□□□□ 0.14
CLPB-201ENST00000294053 ZFYVE16Q7Z3T8 1539 aa15.95■□□□□ 0.14
CLPB-201ENST00000294053 SCAPERQ9BY12 1400 aa15.95■□□□□ 0.14
CLPB-201ENST00000294053 E9PCH4 1651 aa15.95■□□□□ 0.14
CLPB-201ENST00000294053 FANCAO15360 1455 aa15.95■□□□□ 0.14
CLPB-201ENST00000294053 ABCA9Q8IUA7 1624 aa15.94■□□□□ 0.14
CLPB-201ENST00000294053 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
CLPB-201ENST00000294053 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
CLPB-201ENST00000294053 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
CLPB-201ENST00000294053 PER1O15534 1290 aaPredicted RBP15.93■□□□□ 0.14
CLPB-201ENST00000294053 GPRASP1Q5JY77 1395 aa15.93■□□□□ 0.14
CLPB-201ENST00000294053 MYBBP1AQ9BQG0 1328 aaKnown RBP15.92■□□□□ 0.14
CLPB-201ENST00000294053 PANK3Q9H999 370 aa15.92■□□□□ 0.14
CLPB-201ENST00000294053 ATP10AO60312 1499 aa15.92■□□□□ 0.14
CLPB-201ENST00000294053 ARAP3Q8WWN8 1544 aa15.91■□□□□ 0.14
CLPB-201ENST00000294053 PRDM15P57071 1507 aaPredicted RBP15.91■□□□□ 0.14
CLPB-201ENST00000294053 PPM1GO15355 546 aaPredicted RBP15.9■□□□□ 0.14
CLPB-201ENST00000294053 UGGT1Q9NYU2 1555 aa15.9■□□□□ 0.14
CLPB-201ENST00000294053 COL17A1Q9UMD9 1497 aaPredicted RBP15.9■□□□□ 0.14
CLPB-201ENST00000294053 GSE1Q14687 1217 aa15.89■□□□□ 0.13
CLPB-201ENST00000294053 ADGRL1O94910 1474 aa15.89■□□□□ 0.13
CLPB-201ENST00000294053 PLIN1O60240 522 aa15.88■□□□□ 0.13
CLPB-201ENST00000294053 ATP7AQ04656 1500 aa15.88■□□□□ 0.13
CLPB-201ENST00000294053 RALBP1Q15311 655 aa15.88■□□□□ 0.13
CLPB-201ENST00000294053 KTN1Q86UP2 1357 aaKnown RBP15.87■□□□□ 0.13
CLPB-201ENST00000294053 UBE2Q2Q8WVN8 375 aa15.87■□□□□ 0.13
CLPB-201ENST00000294053 FRAT1Q92837 279 aaPredicted RBP15.87■□□□□ 0.13
CLPB-201ENST00000294053 CLTCL1P53675 1640 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms