RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 BCL2L13Q9BXK5 485 aa20.04■□□□□ 0.8
SSRP1-202ENST00000293880 ARHGAP35Q9NRY4 1499 aa20.04■□□□□ 0.8
SSRP1-202ENST00000293880 RILPL2Q969X0 211 aa20.03■□□□□ 0.8
SSRP1-202ENST00000293880 CARMIL1Q5VZK9 1371 aa20.03■□□□□ 0.8
SSRP1-202ENST00000293880 LTV1Q96GA3 475 aaPredicted RBP20.01■□□□□ 0.79
SSRP1-202ENST00000293880 STK31Q9BXU1 1019 aa20.01■□□□□ 0.79
SSRP1-202ENST00000293880 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
SSRP1-202ENST00000293880 PKNOX2Q96KN3 472 aa20.01■□□□□ 0.79
SSRP1-202ENST00000293880 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
SSRP1-202ENST00000293880 PODXL2Q9NZ53 605 aa20.01■□□□□ 0.79
SSRP1-202ENST00000293880 CSPP1Q1MSJ5 1256 aa20.01■□□□□ 0.79
SSRP1-202ENST00000293880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.01■□□□□ 0.79
SSRP1-202ENST00000293880 FBXW7Q969H0 707 aa20.01■□□□□ 0.79
SSRP1-202ENST00000293880 KIF16BQ96L93 1317 aa20.01■□□□□ 0.79
SSRP1-202ENST00000293880 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
SSRP1-202ENST00000293880 RALBP1Q15311 655 aa20■□□□□ 0.79
SSRP1-202ENST00000293880 SOGA1O94964 1423 aa20■□□□□ 0.79
SSRP1-202ENST00000293880 H3BQV1 296 aa19.99■□□□□ 0.79
SSRP1-202ENST00000293880 TPM3P06753 285 aa19.99■□□□□ 0.79
SSRP1-202ENST00000293880 IFFO2Q5TF58 517 aa19.99■□□□□ 0.79
SSRP1-202ENST00000293880 RAB3GAP2Q9H2M9 1393 aa19.98■□□□□ 0.79
SSRP1-202ENST00000293880 SF3A1Q15459 793 aaKnown RBP19.98■□□□□ 0.79
SSRP1-202ENST00000293880 TPD52L1Q16890 204 aaPredicted RBP19.98■□□□□ 0.79
SSRP1-202ENST00000293880 NUTM2FA1L443 756 aa19.98■□□□□ 0.79
SSRP1-202ENST00000293880 PHF14O94880 888 aa19.97■□□□□ 0.79
SSRP1-202ENST00000293880 ST18O60284 1047 aa19.97■□□□□ 0.79
SSRP1-202ENST00000293880 SPAG9O60271 1321 aaKnown RBP19.97■□□□□ 0.79
SSRP1-202ENST00000293880 MPHOSPH9Q99550 1183 aa19.96■□□□□ 0.79
SSRP1-202ENST00000293880 DDX11L8A8MPP1 907 aa19.96■□□□□ 0.79
SSRP1-202ENST00000293880 ELL2O00472 640 aaPredicted RBP19.96■□□□□ 0.79
SSRP1-202ENST00000293880 DDX49Q9Y6V7 483 aaKnown RBP19.96■□□□□ 0.79
SSRP1-202ENST00000293880 EXOC6Q8TAG9 804 aa19.95■□□□□ 0.78
SSRP1-202ENST00000293880 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
SSRP1-202ENST00000293880 GSE1Q14687 1217 aa19.95■□□□□ 0.78
SSRP1-202ENST00000293880 ANKRD45Q5TZF3 282 aa19.95■□□□□ 0.78
SSRP1-202ENST00000293880 CRBNQ96SW2 442 aa19.95■□□□□ 0.78
SSRP1-202ENST00000293880 FOSBP53539 338 aa19.94■□□□□ 0.78
SSRP1-202ENST00000293880 MARCH6O60337 910 aa19.94■□□□□ 0.78
SSRP1-202ENST00000293880 PDE4AP27815 886 aa19.93■□□□□ 0.78
SSRP1-202ENST00000293880 MCTP1Q6DN14 999 aa19.92■□□□□ 0.78
SSRP1-202ENST00000293880 HMMRO75330 724 aa19.92■□□□□ 0.78
SSRP1-202ENST00000293880 G3V3G9 751 aa19.91■□□□□ 0.78
SSRP1-202ENST00000293880 DCAF8Q5TAQ9 597 aa19.91■□□□□ 0.78
SSRP1-202ENST00000293880 MAPK8IP2Q13387 824 aaPredicted RBP19.9■□□□□ 0.78
SSRP1-202ENST00000293880 CEP89Q96ST8 783 aa19.9■□□□□ 0.78
SSRP1-202ENST00000293880 GOLGA6L19H0YKK7 550 aa19.89■□□□□ 0.77
SSRP1-202ENST00000293880 FRAT2O75474 233 aaPredicted RBP19.89■□□□□ 0.77
SSRP1-202ENST00000293880 FAM184AQ8NB25 1140 aa19.89■□□□□ 0.77
SSRP1-202ENST00000293880 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
SSRP1-202ENST00000293880 RAD21O60216 631 aa19.88■□□□□ 0.77
SSRP1-202ENST00000293880 NUP155O75694 1391 aa19.88■□□□□ 0.77
SSRP1-202ENST00000293880 HDGFP51858 240 aaKnown RBP19.87■□□□□ 0.77
SSRP1-202ENST00000293880 NECTIN2Q92692 538 aa19.87■□□□□ 0.77
SSRP1-202ENST00000293880 NGEFQ8N5V2 710 aa19.87■□□□□ 0.77
SSRP1-202ENST00000293880 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
SSRP1-202ENST00000293880 FAM161AQ3B820 660 aa19.87■□□□□ 0.77
SSRP1-202ENST00000293880 CARMIL2Q6F5E8 1435 aa19.87■□□□□ 0.77
SSRP1-202ENST00000293880 TMX4Q9H1E5 349 aaPredicted RBP19.86■□□□□ 0.77
SSRP1-202ENST00000293880 PCMTD1Q96MG8 357 aaPredicted RBP19.86■□□□□ 0.77
SSRP1-202ENST00000293880 CCDC34Q96HJ3 373 aa19.85■□□□□ 0.77
SSRP1-202ENST00000293880 BECN2A8MW95 431 aa19.84■□□□□ 0.77
SSRP1-202ENST00000293880 CYB5RLQ6IPT4 315 aa19.84■□□□□ 0.77
SSRP1-202ENST00000293880 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.77
SSRP1-202ENST00000293880 COG6Q9Y2V7 657 aa19.83■□□□□ 0.77
SSRP1-202ENST00000293880 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
SSRP1-202ENST00000293880 ANO2Q9NQ90 1003 aa19.83■□□□□ 0.76
SSRP1-202ENST00000293880 CCDC88BA6NC98 1476 aa19.82■□□□□ 0.76
SSRP1-202ENST00000293880 AMPHP49418 695 aa19.82■□□□□ 0.76
SSRP1-202ENST00000293880 KDM4AO75164 1064 aa19.82■□□□□ 0.76
SSRP1-202ENST00000293880 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
SSRP1-202ENST00000293880 PRKCSHP14314 528 aaPredicted RBP19.81■□□□□ 0.76
SSRP1-202ENST00000293880 RRP1P56182 461 aaKnown RBP19.81■□□□□ 0.76
SSRP1-202ENST00000293880 CENPQQ7L2Z9 268 aaPredicted RBP19.81■□□□□ 0.76
SSRP1-202ENST00000293880 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
SSRP1-202ENST00000293880 TSR1Q2NL82 804 aaKnown RBP19.8■□□□□ 0.76
SSRP1-202ENST00000293880 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.76
SSRP1-202ENST00000293880 TRAK1Q9UPV9 953 aa19.79■□□□□ 0.76
SSRP1-202ENST00000293880 PANK3Q9H999 370 aa19.79■□□□□ 0.76
SSRP1-202ENST00000293880 DHX37Q8IY37 1157 aaKnown RBP19.79■□□□□ 0.76
SSRP1-202ENST00000293880 NGDNQ8NEJ9 315 aaKnown RBP19.77■□□□□ 0.76
SSRP1-202ENST00000293880 PLCD4Q9BRC7 762 aa19.77■□□□□ 0.76
SSRP1-202ENST00000293880 TPM2P07951 284 aa19.76■□□□□ 0.75
SSRP1-202ENST00000293880 HOMER1Q86YM7 354 aa19.76■□□□□ 0.75
SSRP1-202ENST00000293880 EIF2S2P20042 333 aaKnown RBP19.76■□□□□ 0.75
SSRP1-202ENST00000293880 KIF15Q9NS87 1388 aa19.75■□□□□ 0.75
SSRP1-202ENST00000293880 RRP12Q5JTH9 1297 aaKnown RBP19.75■□□□□ 0.75
SSRP1-202ENST00000293880 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
SSRP1-202ENST00000293880 AKAP17AQ02040 695 aaKnown RBP19.74■□□□□ 0.75
SSRP1-202ENST00000293880 TERF2IPQ9NYB0 399 aa19.74■□□□□ 0.75
SSRP1-202ENST00000293880 SKOR2Q2VWA4 1001 aaPredicted RBP19.74■□□□□ 0.75
SSRP1-202ENST00000293880 EFCAB2Q5VUJ9 269 aa19.74■□□□□ 0.75
SSRP1-202ENST00000293880 NLRP13Q86W25 1043 aa19.74■□□□□ 0.75
SSRP1-202ENST00000293880 VPS8Q8N3P4 1428 aa19.73■□□□□ 0.75
SSRP1-202ENST00000293880 DIAPH3Q9NSV4 1193 aa19.73■□□□□ 0.75
SSRP1-202ENST00000293880 GTF2E1P29083 439 aaPredicted RBP19.73■□□□□ 0.75
SSRP1-202ENST00000293880 TEX35Q5T0J7 233 aa19.73■□□□□ 0.75
SSRP1-202ENST00000293880 BICD2Q8TD16 824 aa19.73■□□□□ 0.75
SSRP1-202ENST00000293880 TPM1P09493 284 aa19.72■□□□□ 0.75
SSRP1-202ENST00000293880 GPS2Q13227 327 aa19.72■□□□□ 0.75
SSRP1-202ENST00000293880 CCDC70Q6NSX1 233 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms