RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 PLA2R1Q13018 1463 aa26.49■■□□□ 1.83
SHF-201ENST00000290894 CCDC184Q52MB2 194 aa26.47■■□□□ 1.83
SHF-201ENST00000290894 ASXL2Q76L83 1435 aa26.47■■□□□ 1.83
SHF-201ENST00000290894 FANCAO15360 1455 aa26.46■■□□□ 1.83
SHF-201ENST00000290894 BCORL1Q5H9F3 1711 aa26.46■■□□□ 1.83
SHF-201ENST00000290894 UHRF1BP1Q6BDS2 1440 aa26.46■■□□□ 1.83
SHF-201ENST00000290894 ERBINQ96RT1 1412 aa26.44■■□□□ 1.82
SHF-201ENST00000290894 KDM5CP41229 1560 aa26.44■■□□□ 1.82
SHF-201ENST00000290894 IQGAP3Q86VI3 1631 aa26.43■■□□□ 1.82
SHF-201ENST00000290894 RALGAPBQ86X10 1494 aa26.43■■□□□ 1.82
SHF-201ENST00000290894 PRKRIP1Q9H875 184 aaPredicted RBP26.42■■□□□ 1.82
SHF-201ENST00000290894 SUPT16HQ9Y5B9 1047 aaKnown RBP26.41■■□□□ 1.82
SHF-201ENST00000290894 ST20-MTHFSA0A0A6YYL1 179 aa26.4■■□□□ 1.82
SHF-201ENST00000290894 POLR1AO95602 1720 aaPredicted RBP26.39■■□□□ 1.82
SHF-201ENST00000290894 ZFYVE16Q7Z3T8 1539 aa26.39■■□□□ 1.82
SHF-201ENST00000290894 ROCK2O75116 1388 aaKnown RBP26.38■■□□□ 1.81
SHF-201ENST00000290894 NPM1P06748 294 aaKnown RBP eCLIP26.38■■□□□ 1.81
SHF-201ENST00000290894 ABCA9Q8IUA7 1624 aa26.38■■□□□ 1.81
SHF-201ENST00000290894 SCAPERQ9BY12 1400 aa26.38■■□□□ 1.81
SHF-201ENST00000290894 ADGRL1O94910 1474 aa26.37■■□□□ 1.81
SHF-201ENST00000290894 ARAP3Q8WWN8 1544 aa26.37■■□□□ 1.81
SHF-201ENST00000290894 HNRNPUQ00839 825 aaKnown RBP eCLIP26.37■■□□□ 1.81
SHF-201ENST00000290894 NBPF1Q3BBV0 1214 aa26.36■■□□□ 1.81
SHF-201ENST00000290894 MAGI2Q86UL8 1455 aa26.36■■□□□ 1.81
SHF-201ENST00000290894 A2MP01023 1474 aa26.34■■□□□ 1.81
SHF-201ENST00000290894 KIF3BO15066 747 aa26.32■■□□□ 1.8
SHF-201ENST00000290894 PRAG1Q86YV5 1406 aa26.32■■□□□ 1.8
SHF-201ENST00000290894 RTEL1-TNFRSF6BF6WH68 1400 aa26.32■■□□□ 1.8
SHF-201ENST00000290894 ATP7AQ04656 1500 aa26.31■■□□□ 1.8
SHF-201ENST00000290894 FAM9BQ8IZU0 186 aa26.31■■□□□ 1.8
SHF-201ENST00000290894 MRS2Q9HD23 443 aa26.31■■□□□ 1.8
SHF-201ENST00000290894 E9PCH4 1651 aa26.26■■□□□ 1.79
SHF-201ENST00000290894 DHX29Q7Z478 1369 aaKnown RBP26.25■■□□□ 1.79
SHF-201ENST00000290894 TRPM1Q7Z4N2 1603 aa26.25■■□□□ 1.79
SHF-201ENST00000290894 INO80Q9ULG1 1556 aaPredicted RBP26.25■■□□□ 1.79
SHF-201ENST00000290894 BCANQ96GW7 911 aa26.25■■□□□ 1.79
SHF-201ENST00000290894 FKBP8Q14318 412 aa26.22■■□□□ 1.79
SHF-201ENST00000290894 ATP10AO60312 1499 aa26.22■■□□□ 1.79
SHF-201ENST00000290894 CD109Q6YHK3 1445 aa26.2■■□□□ 1.78
SHF-201ENST00000290894 ARID4BQ4LE39 1312 aaPredicted RBP26.18■■□□□ 1.78
SHF-201ENST00000290894 KANK1Q14678 1352 aa26.16■■□□□ 1.78
SHF-201ENST00000290894 DEPDC5O75140 1603 aa26.16■■□□□ 1.78
SHF-201ENST00000290894 KIDINS220Q9ULH0 1771 aa26.15■■□□□ 1.78
SHF-201ENST00000290894 SENP3-EIF4A1A0A087X0R7 540 aa26.13■■□□□ 1.77
SHF-201ENST00000290894 SPHKAPQ2M3C7 1700 aa26.12■■□□□ 1.77
SHF-201ENST00000290894 ZNF518AQ6AHZ1 1483 aa26.12■■□□□ 1.77
SHF-201ENST00000290894 TRPM2O94759 1503 aa26.11■■□□□ 1.77
SHF-201ENST00000290894 CLTCL1P53675 1640 aa26.11■■□□□ 1.77
SHF-201ENST00000290894 GPRASP1Q5JY77 1395 aa26.11■■□□□ 1.77
SHF-201ENST00000290894 CYB5RLQ6IPT4 315 aa26.11■■□□□ 1.77
SHF-201ENST00000290894 TET3O43151 1660 aa26.1■■□□□ 1.77
SHF-201ENST00000290894 RAPGEF3O95398 923 aa26.1■■□□□ 1.77
SHF-201ENST00000290894 UGGT1Q9NYU2 1555 aa26.09■■□□□ 1.77
SHF-201ENST00000290894 MROH1Q8NDA8 1641 aa26.09■■□□□ 1.77
SHF-201ENST00000290894 PTPRTO14522 1441 aa26.08■■□□□ 1.77
SHF-201ENST00000290894 GGT6Q6P531 493 aa26.08■■□□□ 1.76
SHF-201ENST00000290894 DISP3Q9P2K9 1392 aa26.08■■□□□ 1.76
SHF-201ENST00000290894 NEFLP07196 543 aa26.07■■□□□ 1.76
SHF-201ENST00000290894 TESK2Q96S53 571 aa26.07■■□□□ 1.76
SHF-201ENST00000290894 PRDM15P57071 1507 aaPredicted RBP26.06■■□□□ 1.76
SHF-201ENST00000290894 VWDEQ8N2E2 1590 aa26.06■■□□□ 1.76
SHF-201ENST00000290894 EIF2AK4Q9P2K8 1649 aaKnown RBP26.05■■□□□ 1.76
SHF-201ENST00000290894 POGZQ7Z3K3 1410 aa26.05■■□□□ 1.76
SHF-201ENST00000290894 CFAP65Q6ZU64 1925 aaKnown RBP26.04■■□□□ 1.76
SHF-201ENST00000290894 CEP152O94986 1710 aa26.04■■□□□ 1.76
SHF-201ENST00000290894 IRX6P78412 446 aaPredicted RBP26.02■■□□□ 1.76
SHF-201ENST00000290894 MADDQ8WXG6 1647 aa26.01■■□□□ 1.75
SHF-201ENST00000290894 TMC1Q8TDI8 760 aa25.99■■□□□ 1.75
SHF-201ENST00000290894 CHGAP10645 457 aaKnown RBP25.98■■□□□ 1.75
SHF-201ENST00000290894 PPRC1Q5VV67 1664 aaKnown RBP25.98■■□□□ 1.75
SHF-201ENST00000290894 COL17A1Q9UMD9 1497 aaPredicted RBP25.98■■□□□ 1.75
SHF-201ENST00000290894 LAMC1P11047 1609 aa25.97■■□□□ 1.75
SHF-201ENST00000290894 CFAP74Q9C0B2 1584 aa25.96■■□□□ 1.75
SHF-201ENST00000290894 EFCAB6Q5THR3 1501 aa25.96■■□□□ 1.75
SHF-201ENST00000290894 RNF17Q9BXT8 1623 aaKnown RBP25.95■■□□□ 1.75
SHF-201ENST00000290894 TMF1P82094 1093 aa25.95■■□□□ 1.75
SHF-201ENST00000290894 FRMPD1Q5SYB0 1578 aa25.95■■□□□ 1.75
SHF-201ENST00000290894 HECW2Q9P2P5 1572 aa25.94■■□□□ 1.74
SHF-201ENST00000290894 ZBED9Q6R2W3 1325 aa25.94■■□□□ 1.74
SHF-201ENST00000290894 CC2D1BQ5T0F9 858 aaKnown RBP25.93■■□□□ 1.74
SHF-201ENST00000290894 PANK3Q9H999 370 aa25.93■■□□□ 1.74
SHF-201ENST00000290894 MLH3Q9UHC1 1453 aa25.93■■□□□ 1.74
SHF-201ENST00000290894 ADGRF5Q8IZF2 1346 aa25.93■■□□□ 1.74
SHF-201ENST00000290894 ABCA6Q8N139 1617 aa25.92■■□□□ 1.74
SHF-201ENST00000290894 CFAP70Q5T0N1 1121 aa25.92■■□□□ 1.74
SHF-201ENST00000290894 PER1O15534 1290 aaPredicted RBP25.91■■□□□ 1.74
SHF-201ENST00000290894 PNISRQ8TF01 805 aaKnown RBP25.91■■□□□ 1.74
SHF-201ENST00000290894 WASHC2CQ9Y4E1 1318 aa25.91■■□□□ 1.74
SHF-201ENST00000290894 MYBBP1AQ9BQG0 1328 aaKnown RBP25.9■■□□□ 1.74
SHF-201ENST00000290894 RALBP1Q15311 655 aa25.88■■□□□ 1.73
SHF-201ENST00000290894 NPATQ14207 1427 aa25.87■■□□□ 1.73
SHF-201ENST00000290894 KTN1Q86UP2 1357 aaKnown RBP25.87■■□□□ 1.73
SHF-201ENST00000290894 KIF1BO60333 1816 aa25.87■■□□□ 1.73
SHF-201ENST00000290894 MROH2AA6NES4 1674 aa25.86■■□□□ 1.73
SHF-201ENST00000290894 NEO1Q92859 1461 aa25.86■■□□□ 1.73
SHF-201ENST00000290894 IQGAP1P46940 1657 aa25.85■■□□□ 1.73
SHF-201ENST00000290894 SCAF11Q99590 1463 aaKnown RBP25.84■■□□□ 1.73
SHF-201ENST00000290894 FAM69CQ0P6D2 419 aa25.82■■□□□ 1.72
SHF-201ENST00000290894 LMTK2Q8IWU2 1503 aa25.82■■□□□ 1.72
SHF-201ENST00000290894 STAC3Q96MF2 364 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms