RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 CCDC18Q5T9S5 1454 aa21■□□□□ 0.95
PSMB4-201ENST00000290541 NPHP4O75161 1426 aaPredicted RBP20.98■□□□□ 0.95
PSMB4-201ENST00000290541 PREX2Q70Z35 1606 aa20.98■□□□□ 0.95
PSMB4-201ENST00000290541 SAMD9LQ8IVG5 1584 aa20.95■□□□□ 0.94
PSMB4-201ENST00000290541 FAM135BQ49AJ0 1406 aa20.93■□□□□ 0.94
PSMB4-201ENST00000290541 CDK11AQ9UQ88 783 aaPredicted RBP20.92■□□□□ 0.94
PSMB4-201ENST00000290541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.92■□□□□ 0.94
PSMB4-201ENST00000290541 TROQ12816 1431 aaPredicted RBP20.91■□□□□ 0.94
PSMB4-201ENST00000290541 TIAM1Q13009 1591 aa20.91■□□□□ 0.94
PSMB4-201ENST00000290541 ZC3H13Q5T200 1668 aaKnown RBP20.9■□□□□ 0.94
PSMB4-201ENST00000290541 ANKLE2Q86XL3 938 aa20.9■□□□□ 0.94
PSMB4-201ENST00000290541 KANK4Q5T7N3 995 aaPredicted RBP20.89■□□□□ 0.93
PSMB4-201ENST00000290541 ROBO1Q9Y6N7 1651 aa20.89■□□□□ 0.93
PSMB4-201ENST00000290541 TNRQ92752 1358 aa20.85■□□□□ 0.93
PSMB4-201ENST00000290541 INO80Q9ULG1 1556 aaPredicted RBP20.85■□□□□ 0.93
PSMB4-201ENST00000290541 MAP3K1Q13233 1512 aa20.85■□□□□ 0.93
PSMB4-201ENST00000290541 MTUS2Q5JR59 1369 aa20.85■□□□□ 0.93
PSMB4-201ENST00000290541 ATP7AQ04656 1500 aa20.84■□□□□ 0.93
PSMB4-201ENST00000290541 A2MP01023 1474 aa20.84■□□□□ 0.93
PSMB4-201ENST00000290541 LRRC9Q6ZRR7 1453 aa20.83■□□□□ 0.93
PSMB4-201ENST00000290541 APLP2Q06481 763 aa20.83■□□□□ 0.93
PSMB4-201ENST00000290541 UGGT1Q9NYU2 1555 aa20.83■□□□□ 0.92
PSMB4-201ENST00000290541 CDC42BPAQ5VT25 1732 aa20.82■□□□□ 0.92
PSMB4-201ENST00000290541 TRIM52Q96A61 297 aa20.82■□□□□ 0.92
PSMB4-201ENST00000290541 EHBP1L1Q8N3D4 1523 aa20.81■□□□□ 0.92
PSMB4-201ENST00000290541 GGT6Q6P531 493 aa20.8■□□□□ 0.92
PSMB4-201ENST00000290541 PZPP20742 1482 aa20.79■□□□□ 0.92
PSMB4-201ENST00000290541 SYCP2Q9BX26 1530 aa20.78■□□□□ 0.92
PSMB4-201ENST00000290541 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
PSMB4-201ENST00000290541 LRP6O75581 1613 aa20.78■□□□□ 0.92
PSMB4-201ENST00000290541 NLRP1Q9C000 1473 aa20.78■□□□□ 0.92
PSMB4-201ENST00000290541 CDK12Q9NYV4 1490 aaPredicted RBP20.78■□□□□ 0.92
PSMB4-201ENST00000290541 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
PSMB4-201ENST00000290541 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.92
PSMB4-201ENST00000290541 THEMISQ8N1K5 641 aaPredicted RBP20.77■□□□□ 0.92
PSMB4-201ENST00000290541 PHLPP1O60346 1717 aa20.76■□□□□ 0.91
PSMB4-201ENST00000290541 ADGBQ8N7X0 1667 aa20.76■□□□□ 0.91
PSMB4-201ENST00000290541 SPAG9O60271 1321 aaKnown RBP20.75■□□□□ 0.91
PSMB4-201ENST00000290541 SETBP1Q9Y6X0 1596 aa20.73■□□□□ 0.91
PSMB4-201ENST00000290541 NCOA2Q15596 1464 aa20.73■□□□□ 0.91
PSMB4-201ENST00000290541 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
PSMB4-201ENST00000290541 JCADQ9P266 1359 aa20.72■□□□□ 0.91
PSMB4-201ENST00000290541 ZNF772Q68DY9 489 aaPredicted RBP20.71■□□□□ 0.91
PSMB4-201ENST00000290541 COL16A1Q07092 1604 aaPredicted RBP20.7■□□□□ 0.9
PSMB4-201ENST00000290541 MIA2Q96PC5 1412 aa20.7■□□□□ 0.9
PSMB4-201ENST00000290541 GPATCH8Q9UKJ3 1502 aaKnown RBP20.69■□□□□ 0.9
PSMB4-201ENST00000290541 CCNB3Q8WWL7 1395 aa20.68■□□□□ 0.9
PSMB4-201ENST00000290541 RXRBP28702 533 aa20.64■□□□□ 0.89
PSMB4-201ENST00000290541 UBR1Q8IWV7 1749 aa20.61■□□□□ 0.89
PSMB4-201ENST00000290541 SCAF11Q99590 1463 aaKnown RBP20.61■□□□□ 0.89
PSMB4-201ENST00000290541 RGS12O14924 1447 aa20.61■□□□□ 0.89
PSMB4-201ENST00000290541 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
PSMB4-201ENST00000290541 TMEM94Q12767 1356 aa20.6■□□□□ 0.89
PSMB4-201ENST00000290541 CFDP1Q9UEE9 299 aaPredicted RBP20.6■□□□□ 0.89
PSMB4-201ENST00000290541 ZNF777Q9ULD5 760 aaPredicted RBP20.6■□□□□ 0.89
PSMB4-201ENST00000290541 SPATA31A6Q5VVP1 1343 aa20.59■□□□□ 0.89
PSMB4-201ENST00000290541 HNRNPMP52272 730 aaKnown RBP eCLIP20.59■□□□□ 0.89
PSMB4-201ENST00000290541 ZNF644Q9H582 1327 aaPredicted RBP20.58■□□□□ 0.89
PSMB4-201ENST00000290541 FGD6Q6ZV73 1430 aa20.58■□□□□ 0.88
PSMB4-201ENST00000290541 KIAA1107Q9UPP5 1409 aa20.58■□□□□ 0.88
PSMB4-201ENST00000290541 MYOM3Q5VTT5 1437 aa20.57■□□□□ 0.88
PSMB4-201ENST00000290541 ZRANB1Q9UGI0 708 aa20.56■□□□□ 0.88
PSMB4-201ENST00000290541 EP400Q96L91 3159 aa20.55■□□□□ 0.88
PSMB4-201ENST00000290541 MEX3CQ5U5Q3 659 aaKnown RBP20.55■□□□□ 0.88
PSMB4-201ENST00000290541 ARHGAP23Q9P227 1491 aa20.55■□□□□ 0.88
PSMB4-201ENST00000290541 SLIT1O75093 1534 aa20.53■□□□□ 0.88
PSMB4-201ENST00000290541 PLEKHH2Q8IVE3 1493 aa20.52■□□□□ 0.88
PSMB4-201ENST00000290541 LRP5O75197 1615 aa20.51■□□□□ 0.87
PSMB4-201ENST00000290541 DHX29Q7Z478 1369 aaKnown RBP20.5■□□□□ 0.87
PSMB4-201ENST00000290541 PRDM15P57071 1507 aaPredicted RBP20.49■□□□□ 0.87
PSMB4-201ENST00000290541 LTKP29376 864 aa20.49■□□□□ 0.87
PSMB4-201ENST00000290541 CAMSAP2Q08AD1 1489 aa20.49■□□□□ 0.87
PSMB4-201ENST00000290541 AHDC1Q5TGY3 1603 aaPredicted RBP20.47■□□□□ 0.87
PSMB4-201ENST00000290541 NWD1Q149M9 1564 aa20.46■□□□□ 0.87
PSMB4-201ENST00000290541 PTPN23Q9H3S7 1636 aa20.46■□□□□ 0.87
PSMB4-201ENST00000290541 ERVK-7P63135 1459 aa20.46■□□□□ 0.87
PSMB4-201ENST00000290541 FOXD1Q16676 465 aa20.46■□□□□ 0.87
PSMB4-201ENST00000290541 WASHC2CQ9Y4E1 1318 aa20.46■□□□□ 0.87
PSMB4-201ENST00000290541 MBD5Q9P267 1494 aa20.45■□□□□ 0.86
PSMB4-201ENST00000290541 RBM33Q96EV2 1170 aaKnown RBP20.45■□□□□ 0.86
PSMB4-201ENST00000290541 DIP2AQ14689 1571 aa20.45■□□□□ 0.86
PSMB4-201ENST00000290541 NKTRP30414 1462 aaKnown RBP20.44■□□□□ 0.86
PSMB4-201ENST00000290541 SLAIN2Q9P270 581 aa20.44■□□□□ 0.86
PSMB4-201ENST00000290541 KDM5AP29375 1690 aaKnown RBP20.44■□□□□ 0.86
PSMB4-201ENST00000290541 RTEL1-TNFRSF6BF6WH68 1400 aa20.44■□□□□ 0.86
PSMB4-201ENST00000290541 ABCC3O15438 1527 aa20.43■□□□□ 0.86
PSMB4-201ENST00000290541 KIF3BO15066 747 aa20.43■□□□□ 0.86
PSMB4-201ENST00000290541 AFF2P51816 1311 aa20.43■□□□□ 0.86
PSMB4-201ENST00000290541 ATAD2Q6PL18 1390 aa20.43■□□□□ 0.86
PSMB4-201ENST00000290541 NUTM2BA6NNL0 878 aaPredicted RBP20.42■□□□□ 0.86
PSMB4-201ENST00000290541 NUTM2EB1AL46 878 aaPredicted RBP20.42■□□□□ 0.86
PSMB4-201ENST00000290541 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
PSMB4-201ENST00000290541 NUTM2AQ8IVF1 878 aaPredicted RBP20.42■□□□□ 0.86
PSMB4-201ENST00000290541 MSH6P52701 1360 aa20.41■□□□□ 0.86
PSMB4-201ENST00000290541 KCNA6P17658 529 aa20.4■□□□□ 0.86
PSMB4-201ENST00000290541 FAM50AQ14320 339 aaKnown RBP20.4■□□□□ 0.86
PSMB4-201ENST00000290541 TXNDC2Q86VQ3 553 aa20.4■□□□□ 0.86
PSMB4-201ENST00000290541 RBM6P78332 1123 aaKnown RBP20.38■□□□□ 0.85
PSMB4-201ENST00000290541 PROSER2Q86WR7 435 aaPredicted RBP20.38■□□□□ 0.85
PSMB4-201ENST00000290541 TET3O43151 1660 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms