RNA–Protein interactions for RNA: ENST00000290295.7

HOXB13-201, Transcript of homeobox B13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB13, Length 3,467 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB13-201ENST00000290295 LRRIQ1Q96JM4 1722 aa17.44■□□□□ 0.38
HOXB13-201ENST00000290295 CC2D1BQ5T0F9 858 aaKnown RBP17.43■□□□□ 0.38
HOXB13-201ENST00000290295 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
HOXB13-201ENST00000290295 NEFMP07197 916 aa17.42■□□□□ 0.38
HOXB13-201ENST00000290295 KDM6BO15054 1643 aa17.42■□□□□ 0.38
HOXB13-201ENST00000290295 OSCARQ8IYS5 282 aa17.42■□□□□ 0.38
HOXB13-201ENST00000290295 KIF14Q15058 1648 aa17.41■□□□□ 0.38
HOXB13-201ENST00000290295 NUDCQ9Y266 331 aa17.4■□□□□ 0.38
HOXB13-201ENST00000290295 RPRD2Q5VT52 1461 aaKnown RBP17.4■□□□□ 0.38
HOXB13-201ENST00000290295 NBPF1Q3BBV0 1214 aa17.39■□□□□ 0.37
HOXB13-201ENST00000290295 USP35Q9P2H5 1018 aa17.37■□□□□ 0.37
HOXB13-201ENST00000290295 RNF123Q5XPI4 1314 aa17.36■□□□□ 0.37
HOXB13-201ENST00000290295 KANK1Q14678 1352 aa17.34■□□□□ 0.37
HOXB13-201ENST00000290295 CCDC141Q6ZP82 1450 aa17.34■□□□□ 0.37
HOXB13-201ENST00000290295 TMF1P82094 1093 aa17.34■□□□□ 0.37
HOXB13-201ENST00000290295 DNMT1P26358 1616 aaKnown RBP17.33■□□□□ 0.37
HOXB13-201ENST00000290295 BRPF3Q9ULD4 1205 aa17.32■□□□□ 0.36
HOXB13-201ENST00000290295 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
HOXB13-201ENST00000290295 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
HOXB13-201ENST00000290295 KNSTRNQ9Y448 316 aa17.3■□□□□ 0.36
HOXB13-201ENST00000290295 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
HOXB13-201ENST00000290295 PZPP20742 1482 aa17.29■□□□□ 0.36
HOXB13-201ENST00000290295 ITSN2Q9NZM3 1697 aa17.29■□□□□ 0.36
HOXB13-201ENST00000290295 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
HOXB13-201ENST00000290295 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
HOXB13-201ENST00000290295 NUTM2DQ5VT03 806 aaPredicted RBP17.28■□□□□ 0.36
HOXB13-201ENST00000290295 PLEKHH2Q8IVE3 1493 aa17.28■□□□□ 0.36
HOXB13-201ENST00000290295 SCAPERQ9BY12 1400 aa17.27■□□□□ 0.35
HOXB13-201ENST00000290295 PANK3Q9H999 370 aa17.26■□□□□ 0.35
HOXB13-201ENST00000290295 PDE4AP27815 886 aa17.25■□□□□ 0.35
HOXB13-201ENST00000290295 DENND4BO75064 1496 aaPredicted RBP17.25■□□□□ 0.35
HOXB13-201ENST00000290295 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
HOXB13-201ENST00000290295 GCC2Q8IWJ2 1684 aa17.24■□□□□ 0.35
HOXB13-201ENST00000290295 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
HOXB13-201ENST00000290295 SYCP2Q9BX26 1530 aa17.24■□□□□ 0.35
HOXB13-201ENST00000290295 ABCA8O94911 1581 aa17.24■□□□□ 0.35
HOXB13-201ENST00000290295 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
HOXB13-201ENST00000290295 ABCC10Q5T3U5 1492 aa17.22■□□□□ 0.35
HOXB13-201ENST00000290295 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
HOXB13-201ENST00000290295 TNNT2P45379 298 aaPredicted RBP17.21■□□□□ 0.35
HOXB13-201ENST00000290295 SAFB2Q14151 953 aaKnown RBP eCLIP17.21■□□□□ 0.35
HOXB13-201ENST00000290295 RALBP1Q15311 655 aa17.21■□□□□ 0.35
HOXB13-201ENST00000290295 PKNOX2Q96KN3 472 aa17.21■□□□□ 0.35
HOXB13-201ENST00000290295 BACH2Q9BYV9 841 aa17.2■□□□□ 0.34
HOXB13-201ENST00000290295 MLECQ14165 292 aa17.2■□□□□ 0.34
HOXB13-201ENST00000290295 ERCC6L2Q5T890 1561 aa17.19■□□□□ 0.34
HOXB13-201ENST00000290295 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
HOXB13-201ENST00000290295 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
HOXB13-201ENST00000290295 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
HOXB13-201ENST00000290295 MS4A1P11836 297 aa17.18■□□□□ 0.34
HOXB13-201ENST00000290295 GSE1Q14687 1217 aa17.18■□□□□ 0.34
HOXB13-201ENST00000290295 TEX14Q8IWB6 1497 aa17.18■□□□□ 0.34
HOXB13-201ENST00000290295 RAPGEF3O95398 923 aa17.18■□□□□ 0.34
HOXB13-201ENST00000290295 TRAPPC8Q9Y2L5 1435 aa17.18■□□□□ 0.34
HOXB13-201ENST00000290295 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
HOXB13-201ENST00000290295 PLCH2O75038 1416 aa17.17■□□□□ 0.34
HOXB13-201ENST00000290295 POLR1AO95602 1720 aaPredicted RBP17.17■□□□□ 0.34
HOXB13-201ENST00000290295 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
HOXB13-201ENST00000290295 DDRGK1Q96HY6 314 aa17.17■□□□□ 0.34
HOXB13-201ENST00000290295 DAXXQ9UER7 740 aaPredicted RBP17.17■□□□□ 0.34
HOXB13-201ENST00000290295 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
HOXB13-201ENST00000290295 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
HOXB13-201ENST00000290295 MBD5Q9P267 1494 aa17.16■□□□□ 0.34
HOXB13-201ENST00000290295 SPATA31E1Q6ZUB1 1445 aa17.16■□□□□ 0.34
HOXB13-201ENST00000290295 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
HOXB13-201ENST00000290295 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
HOXB13-201ENST00000290295 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
HOXB13-201ENST00000290295 CHD1O14646 1710 aa17.15■□□□□ 0.34
HOXB13-201ENST00000290295 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
HOXB13-201ENST00000290295 STK26Q9P289 416 aa17.15■□□□□ 0.34
HOXB13-201ENST00000290295 ABCC2Q92887 1545 aa17.14■□□□□ 0.34
HOXB13-201ENST00000290295 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
HOXB13-201ENST00000290295 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
HOXB13-201ENST00000290295 RCAN3Q9UKA8 241 aa17.11■□□□□ 0.33
HOXB13-201ENST00000290295 NFKBIBQ15653 356 aa17.1■□□□□ 0.33
HOXB13-201ENST00000290295 FANCAO15360 1455 aa17.1■□□□□ 0.33
HOXB13-201ENST00000290295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.1■□□□□ 0.33
HOXB13-201ENST00000290295 NEUROD2Q15784 382 aa17.09■□□□□ 0.33
HOXB13-201ENST00000290295 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
HOXB13-201ENST00000290295 FRAT1Q92837 279 aaPredicted RBP17.08■□□□□ 0.32
HOXB13-201ENST00000290295 ADGRL1O94910 1474 aa17.08■□□□□ 0.32
HOXB13-201ENST00000290295 CDC42BPAQ5VT25 1732 aa17.08■□□□□ 0.32
HOXB13-201ENST00000290295 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.32
HOXB13-201ENST00000290295 FAM69CQ0P6D2 419 aa17.07■□□□□ 0.32
HOXB13-201ENST00000290295 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
HOXB13-201ENST00000290295 ASXL2Q76L83 1435 aa17.05■□□□□ 0.32
HOXB13-201ENST00000290295 SLC4A3P48751 1232 aa17.05■□□□□ 0.32
HOXB13-201ENST00000290295 TTC37Q6PGP7 1564 aa17.05■□□□□ 0.32
HOXB13-201ENST00000290295 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
HOXB13-201ENST00000290295 POGKQ9P215 609 aa17.04■□□□□ 0.32
HOXB13-201ENST00000290295 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
HOXB13-201ENST00000290295 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
HOXB13-201ENST00000290295 CD109Q6YHK3 1445 aa17.04■□□□□ 0.32
HOXB13-201ENST00000290295 CCDC146Q8IYE0 955 aa17.03■□□□□ 0.32
HOXB13-201ENST00000290295 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
HOXB13-201ENST00000290295 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.32
HOXB13-201ENST00000290295 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.32
HOXB13-201ENST00000290295 RALGAPBQ86X10 1494 aa17.02■□□□□ 0.31
HOXB13-201ENST00000290295 WDR7Q9Y4E6 1490 aa17.02■□□□□ 0.31
HOXB13-201ENST00000290295 LRPPRCP42704 1394 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms