RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MROH1Q8NDA8 1641 aa12.53□□□□□ -0.4
PTPDC1-201ENST00000288976 AFAP1Q8N556 730 aa12.52□□□□□ -0.41
PTPDC1-201ENST00000288976 LMTK2Q8IWU2 1503 aa12.51□□□□□ -0.41
PTPDC1-201ENST00000288976 CHIC2Q9UKJ5 165 aa12.51□□□□□ -0.41
PTPDC1-201ENST00000288976 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
PTPDC1-201ENST00000288976 TET3O43151 1660 aa12.49□□□□□ -0.41
PTPDC1-201ENST00000288976 RRP7BPQ9NSQ0 103 aa12.49□□□□□ -0.41
PTPDC1-201ENST00000288976 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
PTPDC1-201ENST00000288976 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
PTPDC1-201ENST00000288976 PZPP20742 1482 aa12.47□□□□□ -0.41
PTPDC1-201ENST00000288976 RAPGEF3O95398 923 aa12.47□□□□□ -0.41
PTPDC1-201ENST00000288976 SIGLEC1Q9BZZ2 1709 aa12.47□□□□□ -0.41
PTPDC1-201ENST00000288976 DHX57Q6P158 1386 aaKnown RBP12.46□□□□□ -0.41
PTPDC1-201ENST00000288976 MROH2AA6NES4 1674 aa12.44□□□□□ -0.42
PTPDC1-201ENST00000288976 CAMSAP1Q5T5Y3 1602 aa12.44□□□□□ -0.42
PTPDC1-201ENST00000288976 CEP152O94986 1710 aa12.43□□□□□ -0.42
PTPDC1-201ENST00000288976 EFCAB6Q5THR3 1501 aa12.43□□□□□ -0.42
PTPDC1-201ENST00000288976 PPP6R1Q9UPN7 881 aa12.43□□□□□ -0.42
PTPDC1-201ENST00000288976 KANK1Q14678 1352 aa12.43□□□□□ -0.42
PTPDC1-201ENST00000288976 ABCC3O15438 1527 aa12.42□□□□□ -0.42
PTPDC1-201ENST00000288976 RPRD2Q5VT52 1461 aaKnown RBP12.42□□□□□ -0.42
PTPDC1-201ENST00000288976 E9PCH4 1651 aa12.41□□□□□ -0.42
PTPDC1-201ENST00000288976 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.42
PTPDC1-201ENST00000288976 NEURL4Q96JN8 1562 aa12.39□□□□□ -0.43
PTPDC1-201ENST00000288976 ARHGAP31Q2M1Z3 1444 aa12.39□□□□□ -0.43
PTPDC1-201ENST00000288976 NUP155O75694 1391 aa12.38□□□□□ -0.43
PTPDC1-201ENST00000288976 TRPM2O94759 1503 aa12.38□□□□□ -0.43
PTPDC1-201ENST00000288976 CLTCQ00610 1675 aaKnown RBP12.37□□□□□ -0.43
PTPDC1-201ENST00000288976 CNTLNQ9NXG0 1405 aa12.36□□□□□ -0.43
PTPDC1-201ENST00000288976 FER1L4A9Z1Z3 1794 aa12.36□□□□□ -0.43
PTPDC1-201ENST00000288976 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
PTPDC1-201ENST00000288976 PTPRTO14522 1441 aa12.35□□□□□ -0.43
PTPDC1-201ENST00000288976 KIF3BO15066 747 aa12.34□□□□□ -0.43
PTPDC1-201ENST00000288976 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
PTPDC1-201ENST00000288976 ADAMTSL3P82987 1691 aa12.34□□□□□ -0.43
PTPDC1-201ENST00000288976 PREX1Q8TCU6 1659 aa12.34□□□□□ -0.43
PTPDC1-201ENST00000288976 PIK3C2BO00750 1634 aa12.33□□□□□ -0.44
PTPDC1-201ENST00000288976 ANKRD30BQ9BXX2 1392 aa12.33□□□□□ -0.44
PTPDC1-201ENST00000288976 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
PTPDC1-201ENST00000288976 SPATA31D1Q6ZQQ2 1576 aa12.31□□□□□ -0.44
PTPDC1-201ENST00000288976 ZEB1P37275 1124 aaPredicted RBP12.31□□□□□ -0.44
PTPDC1-201ENST00000288976 CCER1Q8TC90 406 aaPredicted RBP12.31□□□□□ -0.44
PTPDC1-201ENST00000288976 KDM5AP29375 1690 aaKnown RBP12.31□□□□□ -0.44
PTPDC1-201ENST00000288976 TIMELESSQ9UNS1 1208 aa12.29□□□□□ -0.44
PTPDC1-201ENST00000288976 NOS1P29475 1434 aa12.29□□□□□ -0.44
PTPDC1-201ENST00000288976 NPATQ14207 1427 aa12.29□□□□□ -0.44
PTPDC1-201ENST00000288976 CLTCL1P53675 1640 aa12.28□□□□□ -0.44
PTPDC1-201ENST00000288976 SYNMO15061 1565 aa12.28□□□□□ -0.44
PTPDC1-201ENST00000288976 C3P01024 1663 aa12.28□□□□□ -0.44
PTPDC1-201ENST00000288976 PKD2Q13563 968 aa12.28□□□□□ -0.44
PTPDC1-201ENST00000288976 PLA2R1Q13018 1463 aa12.27□□□□□ -0.44
PTPDC1-201ENST00000288976 KIF1BO60333 1816 aa12.27□□□□□ -0.45
PTPDC1-201ENST00000288976 MADDQ8WXG6 1647 aa12.27□□□□□ -0.45
PTPDC1-201ENST00000288976 ERVK-7P63135 1459 aa12.27□□□□□ -0.45
PTPDC1-201ENST00000288976 WASHC2CQ9Y4E1 1318 aa12.26□□□□□ -0.45
PTPDC1-201ENST00000288976 ADGRB3O60242 1522 aa12.25□□□□□ -0.45
PTPDC1-201ENST00000288976 IFT172Q9UG01 1749 aa12.25□□□□□ -0.45
PTPDC1-201ENST00000288976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTPDC1-201ENST00000288976 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
PTPDC1-201ENST00000288976 CCDC144AA2RUR9 1427 aa12.24□□□□□ -0.45
PTPDC1-201ENST00000288976 GGT6Q6P531 493 aa12.24□□□□□ -0.45
PTPDC1-201ENST00000288976 ZNF142P52746 1687 aaPredicted RBP12.23□□□□□ -0.45
PTPDC1-201ENST00000288976 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.45
PTPDC1-201ENST00000288976 SPATA31E1Q6ZUB1 1445 aa12.2□□□□□ -0.46
PTPDC1-201ENST00000288976 ARID4BQ4LE39 1312 aaPredicted RBP12.2□□□□□ -0.46
PTPDC1-201ENST00000288976 MYO3AQ8NEV4 1616 aa12.2□□□□□ -0.46
PTPDC1-201ENST00000288976 ZMYM3Q14202 1370 aa12.2□□□□□ -0.46
PTPDC1-201ENST00000288976 NLRP1Q9C000 1473 aa12.2□□□□□ -0.46
PTPDC1-201ENST00000288976 TMEM131LA2VDJ0 1609 aa12.2□□□□□ -0.46
PTPDC1-201ENST00000288976 PPLO60437 1756 aa12.19□□□□□ -0.46
PTPDC1-201ENST00000288976 MYOM2P54296 1465 aa12.18□□□□□ -0.46
PTPDC1-201ENST00000288976 ESF1Q9H501 851 aaKnown RBP12.18□□□□□ -0.46
PTPDC1-201ENST00000288976 UBR1Q8IWV7 1749 aa12.17□□□□□ -0.46
PTPDC1-201ENST00000288976 KIAA1210Q9ULL0 1709 aa12.17□□□□□ -0.46
PTPDC1-201ENST00000288976 UHRF1BP1Q6BDS2 1440 aa12.17□□□□□ -0.46
PTPDC1-201ENST00000288976 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
PTPDC1-201ENST00000288976 POLR3GLQ9BT43 218 aa12.16□□□□□ -0.46
PTPDC1-201ENST00000288976 UGGT1Q9NYU2 1555 aa12.16□□□□□ -0.46
PTPDC1-201ENST00000288976 FOXD1Q16676 465 aa12.16□□□□□ -0.46
PTPDC1-201ENST00000288976 SLC52A1Q9NWF4 448 aa12.16□□□□□ -0.46
PTPDC1-201ENST00000288976 TONSLQ96HA7 1378 aa12.16□□□□□ -0.46
PTPDC1-201ENST00000288976 LAMC1P11047 1609 aa12.16□□□□□ -0.46
PTPDC1-201ENST00000288976 NRXN1Q9ULB1 1477 aa12.15□□□□□ -0.46
PTPDC1-201ENST00000288976 TNRQ92752 1358 aa12.14□□□□□ -0.47
PTPDC1-201ENST00000288976 NEXMIFQ5QGS0 1516 aa12.14□□□□□ -0.47
PTPDC1-201ENST00000288976 MYO5BQ9ULV0 1848 aa12.13□□□□□ -0.47
PTPDC1-201ENST00000288976 PTPRMP28827 1452 aa12.13□□□□□ -0.47
PTPDC1-201ENST00000288976 RPGRIP1LQ68CZ1 1315 aa12.13□□□□□ -0.47
PTPDC1-201ENST00000288976 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
PTPDC1-201ENST00000288976 SIN3AQ96ST3 1273 aa12.13□□□□□ -0.47
PTPDC1-201ENST00000288976 ZFYVE9O95405 1425 aa12.13□□□□□ -0.47
PTPDC1-201ENST00000288976 TRPM1Q7Z4N2 1603 aa12.12□□□□□ -0.47
PTPDC1-201ENST00000288976 MLECQ14165 292 aa12.12□□□□□ -0.47
PTPDC1-201ENST00000288976 CEP170BQ9Y4F5 1589 aaPredicted RBP12.12□□□□□ -0.47
PTPDC1-201ENST00000288976 A2ML1A8K2U0 1454 aa12.12□□□□□ -0.47
PTPDC1-201ENST00000288976 SLIT1O75093 1534 aa12.1□□□□□ -0.47
PTPDC1-201ENST00000288976 RALGAPBQ86X10 1494 aa12.1□□□□□ -0.47
PTPDC1-201ENST00000288976 CFAP65Q6ZU64 1925 aaKnown RBP12.09□□□□□ -0.47
PTPDC1-201ENST00000288976 SETBP1Q9Y6X0 1596 aa12.08□□□□□ -0.48
PTPDC1-201ENST00000288976 PRAG1Q86YV5 1406 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms