RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 MAPKBP1O60336 1514 aa12.31□□□□□ -0.44
CCDC144B-201ENST00000285176 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
CCDC144B-201ENST00000285176 ROCK1Q13464 1354 aa12.3□□□□□ -0.44
CCDC144B-201ENST00000285176 KIAA1107Q9UPP5 1409 aa12.3□□□□□ -0.44
CCDC144B-201ENST00000285176 SRPK2P78362 688 aaKnown RBP12.3□□□□□ -0.44
CCDC144B-201ENST00000285176 ACIN1Q9UKV3 1341 aaKnown RBP12.29□□□□□ -0.44
CCDC144B-201ENST00000285176 TSPOAP1O95153 1857 aa12.29□□□□□ -0.44
CCDC144B-201ENST00000285176 ANKRD30BQ9BXX2 1392 aa12.29□□□□□ -0.44
CCDC144B-201ENST00000285176 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
CCDC144B-201ENST00000285176 SCAF1Q9H7N4 1312 aaKnown RBP12.29□□□□□ -0.44
CCDC144B-201ENST00000285176 ABCC10Q5T3U5 1492 aa12.28□□□□□ -0.44
CCDC144B-201ENST00000285176 C11orf95C9JLR9 678 aaPredicted RBP12.28□□□□□ -0.44
CCDC144B-201ENST00000285176 IRX6P78412 446 aaPredicted RBP12.28□□□□□ -0.44
CCDC144B-201ENST00000285176 USP47Q96K76 1375 aa12.28□□□□□ -0.44
CCDC144B-201ENST00000285176 ZCCHC11Q5TAX3 1644 aaKnown RBP12.28□□□□□ -0.44
CCDC144B-201ENST00000285176 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
CCDC144B-201ENST00000285176 CLASP1Q7Z460 1538 aa12.26□□□□□ -0.45
CCDC144B-201ENST00000285176 KDM5BQ9UGL1 1544 aa12.26□□□□□ -0.45
CCDC144B-201ENST00000285176 TCOF1Q13428 1488 aaKnown RBP12.26□□□□□ -0.45
CCDC144B-201ENST00000285176 DENND4BO75064 1496 aaPredicted RBP12.26□□□□□ -0.45
CCDC144B-201ENST00000285176 MINK1Q8N4C8 1332 aaPredicted RBP12.25□□□□□ -0.45
CCDC144B-201ENST00000285176 ARHGEF12Q9NZN5 1544 aa12.25□□□□□ -0.45
CCDC144B-201ENST00000285176 WASHC2AQ641Q2 1341 aa12.25□□□□□ -0.45
CCDC144B-201ENST00000285176 IDI1Q13907 227 aa12.25□□□□□ -0.45
CCDC144B-201ENST00000285176 LMOD2Q6P5Q4 547 aa12.25□□□□□ -0.45
CCDC144B-201ENST00000285176 TMF1P82094 1093 aa12.24□□□□□ -0.45
CCDC144B-201ENST00000285176 ITSN2Q9NZM3 1697 aa12.24□□□□□ -0.45
CCDC144B-201ENST00000285176 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
CCDC144B-201ENST00000285176 SLC26A8Q96RN1 970 aa12.24□□□□□ -0.45
CCDC144B-201ENST00000285176 KNSTRNQ9Y448 316 aa12.24□□□□□ -0.45
CCDC144B-201ENST00000285176 ADCY10Q96PN6 1610 aa12.23□□□□□ -0.45
CCDC144B-201ENST00000285176 MBD5Q9P267 1494 aa12.23□□□□□ -0.45
CCDC144B-201ENST00000285176 NEUROD2Q15784 382 aa12.22□□□□□ -0.45
CCDC144B-201ENST00000285176 ADGRF5Q8IZF2 1346 aa12.22□□□□□ -0.45
CCDC144B-201ENST00000285176 YEATS2Q9ULM3 1422 aa12.22□□□□□ -0.45
CCDC144B-201ENST00000285176 SAMD9LQ8IVG5 1584 aa12.22□□□□□ -0.45
CCDC144B-201ENST00000285176 KIF7Q2M1P5 1343 aa12.22□□□□□ -0.45
CCDC144B-201ENST00000285176 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.45
CCDC144B-201ENST00000285176 DHX29Q7Z478 1369 aaKnown RBP12.21□□□□□ -0.46
CCDC144B-201ENST00000285176 BCL11AQ9H165 835 aa12.2□□□□□ -0.46
CCDC144B-201ENST00000285176 PANK3Q9H999 370 aa12.19□□□□□ -0.46
CCDC144B-201ENST00000285176 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
CCDC144B-201ENST00000285176 PZPP20742 1482 aa12.18□□□□□ -0.46
CCDC144B-201ENST00000285176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC144B-201ENST00000285176 ERBINQ96RT1 1412 aa12.18□□□□□ -0.46
CCDC144B-201ENST00000285176 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
CCDC144B-201ENST00000285176 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
CCDC144B-201ENST00000285176 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
CCDC144B-201ENST00000285176 A2MP01023 1474 aa12.17□□□□□ -0.46
CCDC144B-201ENST00000285176 CCDC184Q52MB2 194 aa12.16□□□□□ -0.46
CCDC144B-201ENST00000285176 TXNDC2Q86VQ3 553 aa12.16□□□□□ -0.46
CCDC144B-201ENST00000285176 DAXXQ9UER7 740 aaPredicted RBP12.16□□□□□ -0.46
CCDC144B-201ENST00000285176 UHRF1BP1LA0JNW5 1464 aa12.16□□□□□ -0.46
CCDC144B-201ENST00000285176 FAM135AQ9P2D6 1515 aa12.15□□□□□ -0.46
CCDC144B-201ENST00000285176 MYO5CQ9NQX4 1742 aa12.15□□□□□ -0.46
CCDC144B-201ENST00000285176 EID1Q9Y6B2 187 aa12.14□□□□□ -0.47
CCDC144B-201ENST00000285176 RIMBP3CA6NJZ7 1639 aa12.14□□□□□ -0.47
CCDC144B-201ENST00000285176 RIMBP3BA6NNM3 1639 aa12.14□□□□□ -0.47
CCDC144B-201ENST00000285176 RIMBP3Q9UFD9 1639 aa12.14□□□□□ -0.47
CCDC144B-201ENST00000285176 WAPLQ7Z5K2 1190 aa12.14□□□□□ -0.47
CCDC144B-201ENST00000285176 RPRD2Q5VT52 1461 aaKnown RBP12.13□□□□□ -0.47
CCDC144B-201ENST00000285176 WDR43Q15061 677 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC144B-201ENST00000285176 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
CCDC144B-201ENST00000285176 FKBP8Q14318 412 aa12.13□□□□□ -0.47
CCDC144B-201ENST00000285176 SHROOM2Q13796 1616 aa12.13□□□□□ -0.47
CCDC144B-201ENST00000285176 PRAM1Q96QH2 718 aa12.12□□□□□ -0.47
CCDC144B-201ENST00000285176 CDC42BPBQ9Y5S2 1711 aa12.12□□□□□ -0.47
CCDC144B-201ENST00000285176 SLC12A5Q9H2X9 1139 aa12.12□□□□□ -0.47
CCDC144B-201ENST00000285176 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
CCDC144B-201ENST00000285176 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
CCDC144B-201ENST00000285176 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
CCDC144B-201ENST00000285176 CDCA8Q53HL2 280 aa12.1□□□□□ -0.47
CCDC144B-201ENST00000285176 DUOX2Q9NRD8 1548 aa12.1□□□□□ -0.47
CCDC144B-201ENST00000285176 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
CCDC144B-201ENST00000285176 PREX2Q70Z35 1606 aa12.1□□□□□ -0.47
CCDC144B-201ENST00000285176 NOS1P29475 1434 aa12.09□□□□□ -0.47
CCDC144B-201ENST00000285176 POGZQ7Z3K3 1410 aa12.09□□□□□ -0.47
CCDC144B-201ENST00000285176 NUTM2GQ5VZR2 741 aa12.09□□□□□ -0.47
CCDC144B-201ENST00000285176 UGGT1Q9NYU2 1555 aa12.09□□□□□ -0.47
CCDC144B-201ENST00000285176 CENPJQ9HC77 1338 aaPredicted RBP12.09□□□□□ -0.47
CCDC144B-201ENST00000285176 HDGFP51858 240 aaKnown RBP12.09□□□□□ -0.47
CCDC144B-201ENST00000285176 MORC1Q86VD1 984 aa12.09□□□□□ -0.47
CCDC144B-201ENST00000285176 CCDC146Q8IYE0 955 aa12.09□□□□□ -0.47
CCDC144B-201ENST00000285176 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
CCDC144B-201ENST00000285176 SLC52A1Q9NWF4 448 aa12.07□□□□□ -0.48
CCDC144B-201ENST00000285176 ABCC1P33527 1531 aa12.07□□□□□ -0.48
CCDC144B-201ENST00000285176 ADGRL2O95490 1459 aa12.06□□□□□ -0.48
CCDC144B-201ENST00000285176 HSPA2P54652 639 aa12.06□□□□□ -0.48
CCDC144B-201ENST00000285176 PMFBP1Q8TBY8 1022 aa12.06□□□□□ -0.48
CCDC144B-201ENST00000285176 SHANK2Q9UPX8 1470 aa12.06□□□□□ -0.48
CCDC144B-201ENST00000285176 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
CCDC144B-201ENST00000285176 GGNBP2Q9H3C7 697 aa12.06□□□□□ -0.48
CCDC144B-201ENST00000285176 FBLN1P23142 703 aa12.04□□□□□ -0.48
CCDC144B-201ENST00000285176 TEX14Q8IWB6 1497 aa12.03□□□□□ -0.48
CCDC144B-201ENST00000285176 NGDNQ8NEJ9 315 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-201ENST00000285176 RRP7AQ9Y3A4 280 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-201ENST00000285176 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
CCDC144B-201ENST00000285176 EIF3AQ14152 1382 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-201ENST00000285176 KTN1Q86UP2 1357 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-201ENST00000285176 A0A0G2JS52 829 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms