RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
LPCAT1-201ENST00000283415 ATP10AO60312 1499 aa18.79■□□□□ 0.6
LPCAT1-201ENST00000283415 RNF17Q9BXT8 1623 aaKnown RBP18.78■□□□□ 0.6
LPCAT1-201ENST00000283415 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
LPCAT1-201ENST00000283415 ABCC2Q92887 1545 aa18.77■□□□□ 0.6
LPCAT1-201ENST00000283415 RBM19Q9Y4C8 960 aaKnown RBP18.77■□□□□ 0.59
LPCAT1-201ENST00000283415 TSPY4P0CV99 314 aa18.76■□□□□ 0.59
LPCAT1-201ENST00000283415 TSPY10P0CW01 314 aa18.76■□□□□ 0.59
LPCAT1-201ENST00000283415 PLA2R1Q13018 1463 aa18.76■□□□□ 0.59
LPCAT1-201ENST00000283415 ERCC6L2Q5T890 1561 aa18.75■□□□□ 0.59
LPCAT1-201ENST00000283415 SYCP2Q9BX26 1530 aa18.73■□□□□ 0.59
LPCAT1-201ENST00000283415 DEPDC5O75140 1603 aa18.73■□□□□ 0.59
LPCAT1-201ENST00000283415 PRDM15P57071 1507 aaPredicted RBP18.72■□□□□ 0.59
LPCAT1-201ENST00000283415 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
LPCAT1-201ENST00000283415 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
LPCAT1-201ENST00000283415 ZCCHC11Q5TAX3 1644 aaKnown RBP18.72■□□□□ 0.59
LPCAT1-201ENST00000283415 UHRF1BP1LA0JNW5 1464 aa18.72■□□□□ 0.59
LPCAT1-201ENST00000283415 PLEKHD1A6NEE1 506 aa18.72■□□□□ 0.59
LPCAT1-201ENST00000283415 USP47Q96K76 1375 aa18.71■□□□□ 0.59
LPCAT1-201ENST00000283415 ARAP3Q8WWN8 1544 aa18.69■□□□□ 0.58
LPCAT1-201ENST00000283415 GPRASP1Q5JY77 1395 aa18.69■□□□□ 0.58
LPCAT1-201ENST00000283415 CHGAP10645 457 aaKnown RBP18.69■□□□□ 0.58
LPCAT1-201ENST00000283415 ZBED9Q6R2W3 1325 aa18.69■□□□□ 0.58
LPCAT1-201ENST00000283415 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
LPCAT1-201ENST00000283415 ERICH6BQ5W0A0 696 aa18.67■□□□□ 0.58
LPCAT1-201ENST00000283415 ABCC1P33527 1531 aa18.67■□□□□ 0.58
LPCAT1-201ENST00000283415 PRAG1Q86YV5 1406 aa18.67■□□□□ 0.58
LPCAT1-201ENST00000283415 PKD2Q13563 968 aa18.66■□□□□ 0.58
LPCAT1-201ENST00000283415 RTL5Q5HYW3 569 aaPredicted RBP18.66■□□□□ 0.58
LPCAT1-201ENST00000283415 NEURL4Q96JN8 1562 aa18.65■□□□□ 0.58
LPCAT1-201ENST00000283415 DUOX2Q9NRD8 1548 aa18.65■□□□□ 0.58
LPCAT1-201ENST00000283415 RNF123Q5XPI4 1314 aa18.65■□□□□ 0.58
LPCAT1-201ENST00000283415 EIF2AK4Q9P2K8 1649 aaKnown RBP18.64■□□□□ 0.58
LPCAT1-201ENST00000283415 CEP152O94986 1710 aa18.64■□□□□ 0.57
LPCAT1-201ENST00000283415 IQGAP1P46940 1657 aa18.64■□□□□ 0.57
LPCAT1-201ENST00000283415 CARD11Q9BXL7 1154 aa18.64■□□□□ 0.57
LPCAT1-201ENST00000283415 LRPPRCP42704 1394 aaKnown RBP18.63■□□□□ 0.57
LPCAT1-201ENST00000283415 VWDEQ8N2E2 1590 aa18.63■□□□□ 0.57
LPCAT1-201ENST00000283415 PLEKHH2Q8IVE3 1493 aa18.63■□□□□ 0.57
LPCAT1-201ENST00000283415 DCAF11Q8TEB1 546 aa18.63■□□□□ 0.57
LPCAT1-201ENST00000283415 ERBINQ96RT1 1412 aa18.63■□□□□ 0.57
LPCAT1-201ENST00000283415 ROCK2O75116 1388 aaKnown RBP18.62■□□□□ 0.57
LPCAT1-201ENST00000283415 NUP155O75694 1391 aa18.62■□□□□ 0.57
LPCAT1-201ENST00000283415 A2MP01023 1474 aa18.62■□□□□ 0.57
LPCAT1-201ENST00000283415 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
LPCAT1-201ENST00000283415 BCL11AQ9H165 835 aa18.62■□□□□ 0.57
LPCAT1-201ENST00000283415 SMG6Q86US8 1419 aaKnown RBP18.62■□□□□ 0.57
LPCAT1-201ENST00000283415 SPHKAPQ2M3C7 1700 aa18.62■□□□□ 0.57
LPCAT1-201ENST00000283415 ZMYM4Q5VZL5 1548 aa18.61■□□□□ 0.57
LPCAT1-201ENST00000283415 ABCA9Q8IUA7 1624 aa18.6■□□□□ 0.57
LPCAT1-201ENST00000283415 CCDC136Q96JN2 1154 aa18.6■□□□□ 0.57
LPCAT1-201ENST00000283415 MADDQ8WXG6 1647 aa18.59■□□□□ 0.57
LPCAT1-201ENST00000283415 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
LPCAT1-201ENST00000283415 HNRNPMP52272 730 aaKnown RBP eCLIP18.58■□□□□ 0.573e-6■□□□□ 9
LPCAT1-201ENST00000283415 ARHGAP5Q13017 1502 aa18.57■□□□□ 0.56
LPCAT1-201ENST00000283415 INO80Q9ULG1 1556 aaPredicted RBP18.57■□□□□ 0.56
LPCAT1-201ENST00000283415 PLCH2O75038 1416 aa18.57■□□□□ 0.56
LPCAT1-201ENST00000283415 COL17A1Q9UMD9 1497 aaPredicted RBP18.56■□□□□ 0.56
LPCAT1-201ENST00000283415 ZFYVE16Q7Z3T8 1539 aa18.56■□□□□ 0.56
LPCAT1-201ENST00000283415 KIAA1210Q9ULL0 1709 aa18.56■□□□□ 0.56
LPCAT1-201ENST00000283415 DAXXQ9UER7 740 aaPredicted RBP18.55■□□□□ 0.56
LPCAT1-201ENST00000283415 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
LPCAT1-201ENST00000283415 INSRP06213 1382 aa18.54■□□□□ 0.56
LPCAT1-201ENST00000283415 TRPM2O94759 1503 aa18.53■□□□□ 0.56
LPCAT1-201ENST00000283415 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
LPCAT1-201ENST00000283415 MROH1Q8NDA8 1641 aa18.53■□□□□ 0.56
LPCAT1-201ENST00000283415 MYOM1P52179 1685 aa18.52■□□□□ 0.56
LPCAT1-201ENST00000283415 TET3O43151 1660 aa18.51■□□□□ 0.55
LPCAT1-201ENST00000283415 PARD3Q8TEW0 1356 aa18.51■□□□□ 0.55
LPCAT1-201ENST00000283415 RTEL1-TNFRSF6BF6WH68 1400 aa18.5■□□□□ 0.55
LPCAT1-201ENST00000283415 ANP32AP39687 249 aaKnown RBP18.5■□□□□ 0.55
LPCAT1-201ENST00000283415 PTPRTO14522 1441 aa18.5■□□□□ 0.55
LPCAT1-201ENST00000283415 PNISRQ8TF01 805 aaKnown RBP18.49■□□□□ 0.55
LPCAT1-201ENST00000283415 CLTCL1P53675 1640 aa18.47■□□□□ 0.55
LPCAT1-201ENST00000283415 BRD4O60885 1362 aaPredicted RBP18.47■□□□□ 0.55
LPCAT1-201ENST00000283415 CCDC144AA2RUR9 1427 aa18.45■□□□□ 0.54
LPCAT1-201ENST00000283415 PER1O15534 1290 aaPredicted RBP18.45■□□□□ 0.54
LPCAT1-201ENST00000283415 WDR7Q9Y4E6 1490 aa18.45■□□□□ 0.54
LPCAT1-201ENST00000283415 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
LPCAT1-201ENST00000283415 TESK2Q96S53 571 aa18.43■□□□□ 0.54
LPCAT1-201ENST00000283415 MYO3AQ8NEV4 1616 aa18.42■□□□□ 0.54
LPCAT1-201ENST00000283415 TRAPPC8Q9Y2L5 1435 aa18.42■□□□□ 0.54
LPCAT1-201ENST00000283415 PPP4R2Q9NY27 417 aa18.41■□□□□ 0.54
LPCAT1-201ENST00000283415 FANCIQ9NVI1 1328 aa18.41■□□□□ 0.54
LPCAT1-201ENST00000283415 BLMP54132 1417 aaPredicted RBP18.41■□□□□ 0.54
LPCAT1-201ENST00000283415 SCAPERQ9BY12 1400 aa18.41■□□□□ 0.54
LPCAT1-201ENST00000283415 TNNT2P45379 298 aaPredicted RBP18.4■□□□□ 0.54
LPCAT1-201ENST00000283415 SYNMO15061 1565 aa18.4■□□□□ 0.54
LPCAT1-201ENST00000283415 ST20-MTHFSA0A0A6YYL1 179 aa18.4■□□□□ 0.54
LPCAT1-201ENST00000283415 ZBTB47Q9UFB7 747 aaPredicted RBP18.38■□□□□ 0.53
LPCAT1-201ENST00000283415 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
LPCAT1-201ENST00000283415 WASHC2CQ9Y4E1 1318 aa18.37■□□□□ 0.53
LPCAT1-201ENST00000283415 DISP3Q9P2K9 1392 aa18.37■□□□□ 0.53
LPCAT1-201ENST00000283415 ZC3H13Q5T200 1668 aaKnown RBP18.37■□□□□ 0.53
LPCAT1-201ENST00000283415 LMTK2Q8IWU2 1503 aa18.36■□□□□ 0.53
LPCAT1-201ENST00000283415 KIDINS220Q9ULH0 1771 aa18.36■□□□□ 0.53
LPCAT1-201ENST00000283415 NRXN1Q9ULB1 1477 aa18.36■□□□□ 0.53
LPCAT1-201ENST00000283415 RALBP1Q15311 655 aa18.36■□□□□ 0.53
LPCAT1-201ENST00000283415 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
LPCAT1-201ENST00000283415 MSH5O43196 834 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms