RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 RRP7BPQ9NSQ0 103 aa15.56■□□□□ 0.08
SCLT1-201ENST00000281142 ZNF518AQ6AHZ1 1483 aa15.56■□□□□ 0.08
SCLT1-201ENST00000281142 ADGBQ8N7X0 1667 aa15.55■□□□□ 0.08
SCLT1-201ENST00000281142 SHANK2Q9UPX8 1470 aa15.55■□□□□ 0.08
SCLT1-201ENST00000281142 KDM5CP41229 1560 aa15.55■□□□□ 0.08
SCLT1-201ENST00000281142 RSPH4AQ5TD94 716 aa15.55■□□□□ 0.08
SCLT1-201ENST00000281142 C9orf84Q5VXU9 1444 aa15.55■□□□□ 0.08
SCLT1-201ENST00000281142 MAST1Q9Y2H9 1570 aa15.54■□□□□ 0.08
SCLT1-201ENST00000281142 PAK3O75914 559 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-201ENST00000281142 NBR1Q14596 966 aa15.54■□□□□ 0.08
SCLT1-201ENST00000281142 MYT1LQ9UL68 1186 aa15.53■□□□□ 0.08
SCLT1-201ENST00000281142 SENP3-EIF4A1A0A087X0R7 540 aa15.53■□□□□ 0.08
SCLT1-201ENST00000281142 TSPY4P0CV99 314 aa15.53■□□□□ 0.08
SCLT1-201ENST00000281142 TSPY10P0CW01 314 aa15.53■□□□□ 0.08
SCLT1-201ENST00000281142 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
SCLT1-201ENST00000281142 INO80Q9ULG1 1556 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-201ENST00000281142 ZFYVE16Q7Z3T8 1539 aa15.52■□□□□ 0.08
SCLT1-201ENST00000281142 KIDINS220Q9ULH0 1771 aa15.52■□□□□ 0.08
SCLT1-201ENST00000281142 CNGB1Q14028 1251 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-201ENST00000281142 FOXD1Q16676 465 aa15.52■□□□□ 0.08
SCLT1-201ENST00000281142 CNTLNQ9NXG0 1405 aa15.52■□□□□ 0.07
SCLT1-201ENST00000281142 PRKRIP1Q9H875 184 aaPredicted RBP15.52■□□□□ 0.07
SCLT1-201ENST00000281142 EIF4G2P78344 907 aaKnown RBP eCLIP15.51■□□□□ 0.07
SCLT1-201ENST00000281142 HECW2Q9P2P5 1572 aa15.51■□□□□ 0.07
SCLT1-201ENST00000281142 ATP7AQ04656 1500 aa15.51■□□□□ 0.07
SCLT1-201ENST00000281142 KDM6BO15054 1643 aa15.51■□□□□ 0.07
SCLT1-201ENST00000281142 ADGRL2O95490 1459 aa15.5■□□□□ 0.07
SCLT1-201ENST00000281142 SPAG9O60271 1321 aaKnown RBP15.5■□□□□ 0.07
SCLT1-201ENST00000281142 ERICH6BQ5W0A0 696 aa15.5■□□□□ 0.07
SCLT1-201ENST00000281142 NCOA1Q15788 1441 aa15.5■□□□□ 0.07
SCLT1-201ENST00000281142 ZMYM4Q5VZL5 1548 aa15.49■□□□□ 0.07
SCLT1-201ENST00000281142 PLXNC1O60486 1568 aa15.49■□□□□ 0.07
SCLT1-201ENST00000281142 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
SCLT1-201ENST00000281142 GCC2Q8IWJ2 1684 aa15.48■□□□□ 0.07
SCLT1-201ENST00000281142 MLH3Q9UHC1 1453 aa15.48■□□□□ 0.07
SCLT1-201ENST00000281142 RTEL1-TNFRSF6BF6WH68 1400 aa15.48■□□□□ 0.07
SCLT1-201ENST00000281142 L3MBTL2Q969R5 705 aa15.47■□□□□ 0.07
SCLT1-201ENST00000281142 NOP58Q9Y2X3 529 aaKnown RBP15.47■□□□□ 0.07
SCLT1-201ENST00000281142 ABCA6Q8N139 1617 aa15.47■□□□□ 0.07
SCLT1-201ENST00000281142 ANKRD30AQ9BXX3 1397 aa15.47■□□□□ 0.07
SCLT1-201ENST00000281142 ZBED9Q6R2W3 1325 aa15.46■□□□□ 0.07
SCLT1-201ENST00000281142 CCDC7Q96M83 1385 aa15.46■□□□□ 0.07
SCLT1-201ENST00000281142 YEATS2Q9ULM3 1422 aa15.45■□□□□ 0.06
SCLT1-201ENST00000281142 KIF15Q9NS87 1388 aa15.44■□□□□ 0.06
SCLT1-201ENST00000281142 DIP2CQ9Y2E4 1556 aa15.44■□□□□ 0.06
SCLT1-201ENST00000281142 NBPF8Q3BBV2 869 aa15.43■□□□□ 0.06
SCLT1-201ENST00000281142 MAGI2Q86UL8 1455 aa15.42■□□□□ 0.06
SCLT1-201ENST00000281142 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
SCLT1-201ENST00000281142 DUOX2Q9NRD8 1548 aa15.41■□□□□ 0.06
SCLT1-201ENST00000281142 MPHOSPH9Q99550 1183 aa15.41■□□□□ 0.06
SCLT1-201ENST00000281142 KIF7Q2M1P5 1343 aa15.4■□□□□ 0.06
SCLT1-201ENST00000281142 ARHGEF40Q8TER5 1519 aa15.4■□□□□ 0.06
SCLT1-201ENST00000281142 ANKRD50Q9ULJ7 1429 aa15.39■□□□□ 0.05
SCLT1-201ENST00000281142 SIGLEC1Q9BZZ2 1709 aa15.39■□□□□ 0.05
SCLT1-201ENST00000281142 A2MP01023 1474 aa15.38■□□□□ 0.05
SCLT1-201ENST00000281142 DHX29Q7Z478 1369 aaKnown RBP15.36■□□□□ 0.05
SCLT1-201ENST00000281142 ERBINQ96RT1 1412 aa15.36■□□□□ 0.05
SCLT1-201ENST00000281142 POLR3GLQ9BT43 218 aa15.36■□□□□ 0.05
SCLT1-201ENST00000281142 ATP10AO60312 1499 aa15.36■□□□□ 0.05
SCLT1-201ENST00000281142 CCDC136Q96JN2 1154 aa15.35■□□□□ 0.05
SCLT1-201ENST00000281142 EIF2AK4Q9P2K8 1649 aaKnown RBP15.34■□□□□ 0.05
SCLT1-201ENST00000281142 REREQ9P2R6 1566 aa15.33■□□□□ 0.05
SCLT1-201ENST00000281142 BCORL1Q5H9F3 1711 aa15.32■□□□□ 0.04
SCLT1-201ENST00000281142 SMG6Q86US8 1419 aaKnown RBP15.32■□□□□ 0.04
SCLT1-201ENST00000281142 IPO9Q96P70 1041 aaKnown RBP15.31■□□□□ 0.04
SCLT1-201ENST00000281142 NUDCQ9Y266 331 aa15.31■□□□□ 0.04
SCLT1-201ENST00000281142 DEPDC5O75140 1603 aa15.31■□□□□ 0.04
SCLT1-201ENST00000281142 UNC13BO14795 1591 aa15.31■□□□□ 0.04
SCLT1-201ENST00000281142 KIF3BO15066 747 aa15.3■□□□□ 0.04
SCLT1-201ENST00000281142 ANP32AP39687 249 aaKnown RBP15.3■□□□□ 0.04
SCLT1-201ENST00000281142 SPATA31E1Q6ZUB1 1445 aa15.3■□□□□ 0.04
SCLT1-201ENST00000281142 MROH1Q8NDA8 1641 aa15.3■□□□□ 0.04
SCLT1-201ENST00000281142 RNF17Q9BXT8 1623 aaKnown RBP15.29■□□□□ 0.04
SCLT1-201ENST00000281142 ANKRD30BQ9BXX2 1392 aa15.28■□□□□ 0.04
SCLT1-201ENST00000281142 ZBTB47Q9UFB7 747 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-201ENST00000281142 AGLP35573 1532 aa15.27■□□□□ 0.04
SCLT1-201ENST00000281142 NPM2Q86SE8 214 aaKnown RBP15.27■□□□□ 0.04
SCLT1-201ENST00000281142 RNF123Q5XPI4 1314 aa15.27■□□□□ 0.03
SCLT1-201ENST00000281142 ZNF326Q5BKZ1 582 aaKnown RBP15.27■□□□□ 0.03
SCLT1-201ENST00000281142 RPRD2Q5VT52 1461 aaKnown RBP15.26■□□□□ 0.03
SCLT1-201ENST00000281142 PRDM15P57071 1507 aaPredicted RBP15.26■□□□□ 0.03
SCLT1-201ENST00000281142 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
SCLT1-201ENST00000281142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCLT1-201ENST00000281142 KDM5DQ9BY66 1539 aa15.25■□□□□ 0.03
SCLT1-201ENST00000281142 NUP155O75694 1391 aa15.25■□□□□ 0.03
SCLT1-201ENST00000281142 RTL5Q5HYW3 569 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-201ENST00000281142 IQGAP3Q86VI3 1631 aa15.24■□□□□ 0.03
SCLT1-201ENST00000281142 PZPP20742 1482 aa15.24■□□□□ 0.03
SCLT1-201ENST00000281142 GGT6Q6P531 493 aa15.24■□□□□ 0.03
SCLT1-201ENST00000281142 SLC4A1APQ9BWU0 796 aaKnown RBP15.24■□□□□ 0.03
SCLT1-201ENST00000281142 FAM135AQ9P2D6 1515 aa15.23■□□□□ 0.03
SCLT1-201ENST00000281142 VWDEQ8N2E2 1590 aa15.23■□□□□ 0.03
SCLT1-201ENST00000281142 CEP152O94986 1710 aa15.23■□□□□ 0.03
SCLT1-201ENST00000281142 POLR1AO95602 1720 aaPredicted RBP15.23■□□□□ 0.03
SCLT1-201ENST00000281142 RTN4Q9NQC3 1192 aaKnown RBP15.22■□□□□ 0.03
SCLT1-201ENST00000281142 ARID4BQ4LE39 1312 aaPredicted RBP15.22■□□□□ 0.03
SCLT1-201ENST00000281142 MLECQ14165 292 aa15.21■□□□□ 0.03
SCLT1-201ENST00000281142 LAS1LQ9Y4W2 734 aaKnown RBP15.21■□□□□ 0.03
SCLT1-201ENST00000281142 PNISRQ8TF01 805 aaKnown RBP15.2■□□□□ 0.02
SCLT1-201ENST00000281142 EXOC6Q8TAG9 804 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms