RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 NUP155O75694 1391 aa30.21■■■□□ 2.43
YBX3-202ENST00000279550 A2MP01023 1474 aa30.21■■■□□ 2.43
YBX3-202ENST00000279550 UNC13BO14795 1591 aa30.2■■■□□ 2.43
YBX3-202ENST00000279550 MAGI2Q86UL8 1455 aa30.19■■■□□ 2.42
YBX3-202ENST00000279550 DIP2CQ9Y2E4 1556 aa30.19■■■□□ 2.42
YBX3-202ENST00000279550 PPP1R15AO75807 674 aaPredicted RBP30.19■■■□□ 2.42
YBX3-202ENST00000279550 SLC4A1APQ9BWU0 796 aaKnown RBP30.19■■■□□ 2.42
YBX3-202ENST00000279550 YEATS2Q9ULM3 1422 aa30.18■■■□□ 2.42
YBX3-202ENST00000279550 TONSLQ96HA7 1378 aa30.18■■■□□ 2.42
YBX3-202ENST00000279550 EIF2AK4Q9P2K8 1649 aaKnown RBP30.17■■■□□ 2.42
YBX3-202ENST00000279550 FOXD1Q16676 465 aa30.13■■■□□ 2.41
YBX3-202ENST00000279550 KIF3BO15066 747 aa30.12■■■□□ 2.41
YBX3-202ENST00000279550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.12■■■□□ 2.411e-9■■□□□ 14.4
YBX3-202ENST00000279550 FAM135AQ9P2D6 1515 aa30.11■■■□□ 2.41
YBX3-202ENST00000279550 DEPDC5O75140 1603 aa30.11■■■□□ 2.41
YBX3-202ENST00000279550 IQGAP3Q86VI3 1631 aa30.08■■■□□ 2.41
YBX3-202ENST00000279550 ANKRD30BQ9BXX2 1392 aa30.06■■■□□ 2.4
YBX3-202ENST00000279550 ATP10AO60312 1499 aa30.05■■■□□ 2.4
YBX3-202ENST00000279550 PKD2Q13563 968 aa30.05■■■□□ 2.4
YBX3-202ENST00000279550 BCORL1Q5H9F3 1711 aa30.05■■■□□ 2.4
YBX3-202ENST00000279550 PRDM15P57071 1507 aaPredicted RBP30.04■■■□□ 2.4
YBX3-202ENST00000279550 MROH1Q8NDA8 1641 aa30.03■■■□□ 2.4
YBX3-202ENST00000279550 RNF17Q9BXT8 1623 aaKnown RBP30.03■■■□□ 2.4
YBX3-202ENST00000279550 ARHGEF40Q8TER5 1519 aa30.03■■■□□ 2.4
YBX3-202ENST00000279550 REREQ9P2R6 1566 aa30.01■■■□□ 2.39
YBX3-202ENST00000279550 MIER1Q8N108 512 aa30■■■□□ 2.39
YBX3-202ENST00000279550 KANK1Q14678 1352 aa30■■■□□ 2.39
YBX3-202ENST00000279550 VWDEQ8N2E2 1590 aa30■■■□□ 2.39
YBX3-202ENST00000279550 RPRD2Q5VT52 1461 aaKnown RBP29.96■■■□□ 2.39
YBX3-202ENST00000279550 GGT6Q6P531 493 aa29.93■■■□□ 2.38
YBX3-202ENST00000279550 AGLP35573 1532 aa29.92■■■□□ 2.38
YBX3-202ENST00000279550 TET3O43151 1660 aa29.89■■■□□ 2.38
YBX3-202ENST00000279550 LMTK2Q8IWU2 1503 aa29.88■■■□□ 2.37
YBX3-202ENST00000279550 L3MBTL2Q969R5 705 aa29.88■■■□□ 2.37
YBX3-202ENST00000279550 SIGLEC1Q9BZZ2 1709 aa29.87■■■□□ 2.37
YBX3-202ENST00000279550 E9PCH4 1651 aa29.84■■■□□ 2.37
YBX3-202ENST00000279550 HIRIP3Q9BW71 556 aaPredicted RBP29.83■■■□□ 2.37
YBX3-202ENST00000279550 CEP152O94986 1710 aa29.83■■■□□ 2.37
YBX3-202ENST00000279550 ABCC3O15438 1527 aa29.82■■■□□ 2.36
YBX3-202ENST00000279550 EFCAB6Q5THR3 1501 aa29.82■■■□□ 2.36
YBX3-202ENST00000279550 WASHC2CQ9Y4E1 1318 aa29.82■■■□□ 2.36
YBX3-202ENST00000279550 PLA2R1Q13018 1463 aa29.8■■■□□ 2.36
YBX3-202ENST00000279550 ZC3H13Q5T200 1668 aaKnown RBP29.78■■■□□ 2.36
YBX3-202ENST00000279550 PPP6R1Q9UPN7 881 aa29.74■■■□□ 2.35
YBX3-202ENST00000279550 CCDC144AA2RUR9 1427 aa29.74■■■□□ 2.35
YBX3-202ENST00000279550 PTPRTO14522 1441 aa29.73■■■□□ 2.35
YBX3-202ENST00000279550 CAMSAP1Q5T5Y3 1602 aa29.73■■■□□ 2.35
YBX3-202ENST00000279550 NPATQ14207 1427 aa29.72■■■□□ 2.35
YBX3-202ENST00000279550 NBPF8Q3BBV2 869 aa29.71■■■□□ 2.35
YBX3-202ENST00000279550 ARID4BQ4LE39 1312 aaPredicted RBP29.71■■■□□ 2.35
YBX3-202ENST00000279550 SPHKAPQ2M3C7 1700 aa29.7■■■□□ 2.35
YBX3-202ENST00000279550 TRPM2O94759 1503 aa29.7■■■□□ 2.34
YBX3-202ENST00000279550 MLECQ14165 292 aa29.69■■■□□ 2.34
YBX3-202ENST00000279550 ARHGAP31Q2M1Z3 1444 aa29.68■■■□□ 2.34
YBX3-202ENST00000279550 DDX10Q13206 875 aaKnown RBP29.66■■■□□ 2.34
YBX3-202ENST00000279550 HSPA5P11021 654 aaKnown RBP29.63■■■□□ 2.33
YBX3-202ENST00000279550 CLTCQ00610 1675 aaKnown RBP29.61■■■□□ 2.33
YBX3-202ENST00000279550 CLTCL1P53675 1640 aa29.59■■■□□ 2.33
YBX3-202ENST00000279550 CNTLNQ9NXG0 1405 aa29.59■■■□□ 2.33
YBX3-202ENST00000279550 NOS1P29475 1434 aa29.57■■■□□ 2.32
YBX3-202ENST00000279550 YTHDC1Q96MU7 727 aaKnown RBP29.57■■■□□ 2.32
YBX3-202ENST00000279550 ESF1Q9H501 851 aaKnown RBP29.56■■■□□ 2.32
YBX3-202ENST00000279550 EIF4G2P78344 907 aaKnown RBP eCLIP29.54■■■□□ 2.32
YBX3-202ENST00000279550 UGGT1Q9NYU2 1555 aa29.54■■■□□ 2.32
YBX3-202ENST00000279550 CFAP65Q6ZU64 1925 aaKnown RBP29.53■■■□□ 2.32
YBX3-202ENST00000279550 SPATA31E1Q6ZUB1 1445 aa29.52■■■□□ 2.32
YBX3-202ENST00000279550 PREX1Q8TCU6 1659 aa29.5■■■□□ 2.31
YBX3-202ENST00000279550 CENPBP07199 599 aaPredicted RBP29.5■■■□□ 2.31
YBX3-202ENST00000279550 SYNMO15061 1565 aa29.5■■■□□ 2.31
YBX3-202ENST00000279550 RGL3Q3MIN7 710 aa29.49■■■□□ 2.31
YBX3-202ENST00000279550 UHRF1BP1Q6BDS2 1440 aa29.49■■■□□ 2.31
YBX3-202ENST00000279550 ZMYM3Q14202 1370 aa29.48■■■□□ 2.31
YBX3-202ENST00000279550 ERVK-7P63135 1459 aa29.48■■■□□ 2.31
YBX3-202ENST00000279550 NEURL4Q96JN8 1562 aa29.46■■■□□ 2.31
YBX3-202ENST00000279550 FBXO31Q5XUX0 539 aaPredicted RBP29.46■■■□□ 2.31
YBX3-202ENST00000279550 PIK3C2BO00750 1634 aa29.45■■■□□ 2.3
YBX3-202ENST00000279550 ZNF326Q5BKZ1 582 aaKnown RBP29.45■■■□□ 2.3
YBX3-202ENST00000279550 DCAF11Q8TEB1 546 aa29.44■■■□□ 2.3
YBX3-202ENST00000279550 WASHC2AQ641Q2 1341 aa29.44■■■□□ 2.3
YBX3-202ENST00000279550 MROH2AA6NES4 1674 aa29.44■■■□□ 2.3
YBX3-202ENST00000279550 SPATA31D1Q6ZQQ2 1576 aa29.43■■■□□ 2.3
YBX3-202ENST00000279550 KIF1BO60333 1816 aa29.42■■■□□ 2.3
YBX3-202ENST00000279550 SLC52A1Q9NWF4 448 aa29.42■■■□□ 2.3
YBX3-202ENST00000279550 FER1L4A9Z1Z3 1794 aa29.4■■■□□ 2.3
YBX3-202ENST00000279550 RALGAPBQ86X10 1494 aa29.4■■■□□ 2.3
YBX3-202ENST00000279550 ADGRB3O60242 1522 aa29.39■■■□□ 2.3
YBX3-202ENST00000279550 KDM2AQ9Y2K7 1162 aa29.39■■■□□ 2.3
YBX3-202ENST00000279550 C11orf95C9JLR9 678 aaPredicted RBP29.38■■■□□ 2.29
YBX3-202ENST00000279550 IDI1Q13907 227 aa29.37■■■□□ 2.29
YBX3-202ENST00000279550 CHGAP10645 457 aaKnown RBP29.34■■■□□ 2.29
YBX3-202ENST00000279550 CCDC7Q96M83 1385 aa29.33■■■□□ 2.29
YBX3-202ENST00000279550 SCAF1Q9H7N4 1312 aaKnown RBP29.33■■■□□ 2.29
YBX3-202ENST00000279550 USP47Q96K76 1375 aa29.31■■■□□ 2.28
YBX3-202ENST00000279550 PRAG1Q86YV5 1406 aa29.31■■■□□ 2.28
YBX3-202ENST00000279550 STAC3Q96MF2 364 aa29.31■■■□□ 2.28
YBX3-202ENST00000279550 MADDQ8WXG6 1647 aa29.3■■■□□ 2.28
YBX3-202ENST00000279550 C3P01024 1663 aa29.3■■■□□ 2.28
YBX3-202ENST00000279550 POLR1AO95602 1720 aaPredicted RBP29.29■■■□□ 2.28
YBX3-202ENST00000279550 ADAMTSL3P82987 1691 aa29.29■■■□□ 2.28
YBX3-202ENST00000279550 TNRQ92752 1358 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms