RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 FKBP8Q14318 412 aa34.68■■■■□ 3.14
ROM1-201ENST00000278833 BCORL1Q5H9F3 1711 aa34.68■■■■□ 3.14
ROM1-201ENST00000278833 MYO5CQ9NQX4 1742 aa34.64■■■■□ 3.14
ROM1-201ENST00000278833 PLCH2O75038 1416 aa34.64■■■■□ 3.14
ROM1-201ENST00000278833 USP47Q96K76 1375 aa34.64■■■■□ 3.14
ROM1-201ENST00000278833 PLEKHH2Q8IVE3 1493 aa34.63■■■■□ 3.13
ROM1-201ENST00000278833 FAM135AQ9P2D6 1515 aa34.61■■■■□ 3.13
ROM1-201ENST00000278833 TSHZ2Q9NRE2 1034 aa34.58■■■■□ 3.13
ROM1-201ENST00000278833 SYCP2Q9BX26 1530 aa34.58■■■■□ 3.13
ROM1-201ENST00000278833 HNRNPUQ00839 825 aaKnown RBP eCLIP34.57■■■■□ 3.12
ROM1-201ENST00000278833 MYT1Q01538 1121 aa34.56■■■■□ 3.12
ROM1-201ENST00000278833 FANCAO15360 1455 aa34.56■■■■□ 3.12
ROM1-201ENST00000278833 ROCK2O75116 1388 aaKnown RBP34.55■■■■□ 3.12
ROM1-201ENST00000278833 DHX29Q7Z478 1369 aaKnown RBP34.55■■■■□ 3.12
ROM1-201ENST00000278833 IQGAP3Q86VI3 1631 aa34.54■■■■□ 3.12
ROM1-201ENST00000278833 ARAP3Q8WWN8 1544 aa34.53■■■■□ 3.12
ROM1-201ENST00000278833 ARHGAP5Q13017 1502 aa34.53■■■■□ 3.12
ROM1-201ENST00000278833 EFCAB2Q5VUJ9 269 aa34.52■■■■□ 3.12
ROM1-201ENST00000278833 NEO1Q92859 1461 aa34.52■■■■□ 3.12
ROM1-201ENST00000278833 HNRNPMP52272 730 aaKnown RBP eCLIP34.51■■■■□ 3.12
ROM1-201ENST00000278833 MAGI2Q86UL8 1455 aa34.5■■■■□ 3.11
ROM1-201ENST00000278833 COL17A1Q9UMD9 1497 aaPredicted RBP34.47■■■■□ 3.11
ROM1-201ENST00000278833 LAMC1P11047 1609 aa34.47■■■■□ 3.11
ROM1-201ENST00000278833 E9PCH4 1651 aa34.46■■■■□ 3.11
ROM1-201ENST00000278833 ERICH6BQ5W0A0 696 aa34.45■■■■□ 3.11
ROM1-201ENST00000278833 CFAP74Q9C0B2 1584 aa34.45■■■■□ 3.11
ROM1-201ENST00000278833 TRPM1Q7Z4N2 1603 aa34.45■■■■□ 3.1
ROM1-201ENST00000278833 ZBED9Q6R2W3 1325 aa34.44■■■■□ 3.1
ROM1-201ENST00000278833 DUOX2Q9NRD8 1548 aa34.44■■■■□ 3.1
ROM1-201ENST00000278833 CCDC184Q52MB2 194 aa34.43■■■■□ 3.1
ROM1-201ENST00000278833 ATP10AO60312 1499 aa34.41■■■■□ 3.1
ROM1-201ENST00000278833 MRS2Q9HD23 443 aa34.4■■■■□ 3.1
ROM1-201ENST00000278833 ERBINQ96RT1 1412 aa34.39■■■■□ 3.1
ROM1-201ENST00000278833 BCANQ96GW7 911 aa34.39■■■■□ 3.1
ROM1-201ENST00000278833 ADGRL1O94910 1474 aa34.38■■■■□ 3.09
ROM1-201ENST00000278833 ABCC1P33527 1531 aa34.36■■■■□ 3.09
ROM1-201ENST00000278833 RAPGEF3O95398 923 aa34.35■■■■□ 3.09
ROM1-201ENST00000278833 PRAG1Q86YV5 1406 aa34.35■■■■□ 3.09
ROM1-201ENST00000278833 SCAPERQ9BY12 1400 aa34.35■■■■□ 3.09
ROM1-201ENST00000278833 CCDC144AA2RUR9 1427 aa34.34■■■■□ 3.09
ROM1-201ENST00000278833 KTN1Q86UP2 1357 aaKnown RBP34.33■■■■□ 3.09
ROM1-201ENST00000278833 EIF2AK4Q9P2K8 1649 aaKnown RBP34.33■■■■□ 3.09
ROM1-201ENST00000278833 PLA2R1Q13018 1463 aa34.33■■■■□ 3.09
ROM1-201ENST00000278833 GPRASP1Q5JY77 1395 aa34.32■■■■□ 3.08
ROM1-201ENST00000278833 CARD11Q9BXL7 1154 aa34.3■■■■□ 3.08
ROM1-201ENST00000278833 ZNF326Q5BKZ1 582 aaKnown RBP34.27■■■■□ 3.08
ROM1-201ENST00000278833 PRDM15P57071 1507 aaPredicted RBP34.24■■■■□ 3.07
ROM1-201ENST00000278833 A2MP01023 1474 aa34.24■■■■□ 3.07
ROM1-201ENST00000278833 FRMPD1Q5SYB0 1578 aa34.23■■■■□ 3.07
ROM1-201ENST00000278833 RICTORQ6R327 1708 aa34.23■■■■□ 3.07
ROM1-201ENST00000278833 POGZQ7Z3K3 1410 aa34.22■■■■□ 3.07
ROM1-201ENST00000278833 AFAP1Q8N556 730 aa34.22■■■■□ 3.07
ROM1-201ENST00000278833 FAM9BQ8IZU0 186 aa34.21■■■■□ 3.07
ROM1-201ENST00000278833 TRAPPC8Q9Y2L5 1435 aa34.21■■■■□ 3.07
ROM1-201ENST00000278833 RNF17Q9BXT8 1623 aaKnown RBP34.2■■■■□ 3.07
ROM1-201ENST00000278833 DCAF11Q8TEB1 546 aa34.19■■■■□ 3.06
ROM1-201ENST00000278833 RTEL1-TNFRSF6BF6WH68 1400 aa34.18■■■■□ 3.06
ROM1-201ENST00000278833 SMG6Q86US8 1419 aaKnown RBP34.18■■■■□ 3.06
ROM1-201ENST00000278833 ZNF518AQ6AHZ1 1483 aa34.17■■■■□ 3.06
ROM1-201ENST00000278833 DEPDC5O75140 1603 aa34.15■■■■□ 3.06
ROM1-201ENST00000278833 ST20-MTHFSA0A0A6YYL1 179 aa34.12■■■■□ 3.05
ROM1-201ENST00000278833 BRD4O60885 1362 aaPredicted RBP34.11■■■■□ 3.05
ROM1-201ENST00000278833 ZFYVE16Q7Z3T8 1539 aa34.11■■■■□ 3.05
ROM1-201ENST00000278833 LRPPRCP42704 1394 aaKnown RBP34.09■■■■□ 3.05
ROM1-201ENST00000278833 ZMYM4Q5VZL5 1548 aa34.08■■■■□ 3.05
ROM1-201ENST00000278833 RALBP1Q15311 655 aa34.08■■■■□ 3.05
ROM1-201ENST00000278833 KDM2AQ9Y2K7 1162 aa34.07■■■■□ 3.05
ROM1-201ENST00000278833 PPP4R2Q9NY27 417 aa34.05■■■■□ 3.04
ROM1-201ENST00000278833 TRPM2O94759 1503 aa34.05■■■■□ 3.04
ROM1-201ENST00000278833 INO80Q9ULG1 1556 aaPredicted RBP34.04■■■■□ 3.04
ROM1-201ENST00000278833 PNISRQ8TF01 805 aaKnown RBP34.03■■■■□ 3.04
ROM1-201ENST00000278833 MYBBP1AQ9BQG0 1328 aaKnown RBP34.03■■■■□ 3.04
ROM1-201ENST00000278833 CEP152O94986 1710 aa34.03■■■■□ 3.04
ROM1-201ENST00000278833 NEURL4Q96JN8 1562 aa34.03■■■■□ 3.04
ROM1-201ENST00000278833 MYT1LQ9UL68 1186 aa34.02■■■■□ 3.04
ROM1-201ENST00000278833 SPAG9O60271 1321 aaKnown RBP34.01■■■■□ 3.04
ROM1-201ENST00000278833 YEATS2Q9ULM3 1422 aa34.01■■■■□ 3.04
ROM1-201ENST00000278833 MLH3Q9UHC1 1453 aa34■■■■□ 3.03
ROM1-201ENST00000278833 TET3O43151 1660 aa34■■■■□ 3.03
ROM1-201ENST00000278833 SPHKAPQ2M3C7 1700 aa34■■■■□ 3.03
ROM1-201ENST00000278833 VWDEQ8N2E2 1590 aa34■■■■□ 3.03
ROM1-201ENST00000278833 PARD3Q8TEW0 1356 aa33.99■■■■□ 3.03
ROM1-201ENST00000278833 MADDQ8WXG6 1647 aa33.99■■■■□ 3.03
ROM1-201ENST00000278833 RNF123Q5XPI4 1314 aa33.99■■■■□ 3.03
ROM1-201ENST00000278833 HECW2Q9P2P5 1572 aa33.99■■■■□ 3.03
ROM1-201ENST00000278833 WASHC2CQ9Y4E1 1318 aa33.97■■■■□ 3.03
ROM1-201ENST00000278833 PTPRTO14522 1441 aa33.97■■■■□ 3.03
ROM1-201ENST00000278833 POLR3GLQ9BT43 218 aa33.97■■■■□ 3.03
ROM1-201ENST00000278833 IQGAP1P46940 1657 aa33.97■■■■□ 3.03
ROM1-201ENST00000278833 INSRP06213 1382 aa33.96■■■■□ 3.03
ROM1-201ENST00000278833 NUDCQ9Y266 331 aa33.96■■■■□ 3.03
ROM1-201ENST00000278833 RBM19Q9Y4C8 960 aaKnown RBP33.95■■■■□ 3.02
ROM1-201ENST00000278833 KIDINS220Q9ULH0 1771 aa33.94■■■■□ 3.02
ROM1-201ENST00000278833 ARHGEF40Q8TER5 1519 aa33.93■■■■□ 3.02
ROM1-201ENST00000278833 STAC3Q96MF2 364 aa33.93■■■■□ 3.02
ROM1-201ENST00000278833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.92■■■■□ 3.02
ROM1-201ENST00000278833 ATP7AQ04656 1500 aa33.91■■■■□ 3.02
ROM1-201ENST00000278833 TMC1Q8TDI8 760 aa33.9■■■■□ 3.02
ROM1-201ENST00000278833 TESK2Q96S53 571 aa33.9■■■■□ 3.02
ROM1-201ENST00000278833 KIAA1210Q9ULL0 1709 aa33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms