RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 USP47Q96K76 1375 aa10.2□□□□□ -0.78
TRIM6-201ENST00000278302 WASHC2CQ9Y4E1 1318 aa10.19□□□□□ -0.78
TRIM6-201ENST00000278302 CARD11Q9BXL7 1154 aa10.19□□□□□ -0.78
TRIM6-201ENST00000278302 KIF15Q9NS87 1388 aa10.19□□□□□ -0.78
TRIM6-201ENST00000278302 SHANK2Q9UPX8 1470 aa10.18□□□□□ -0.78
TRIM6-201ENST00000278302 DCAF11Q8TEB1 546 aa10.18□□□□□ -0.78
TRIM6-201ENST00000278302 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
TRIM6-201ENST00000278302 MBD5Q9P267 1494 aa10.16□□□□□ -0.78
TRIM6-201ENST00000278302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRIM6-201ENST00000278302 POLR1AO95602 1720 aaPredicted RBP10.15□□□□□ -0.78
TRIM6-201ENST00000278302 ZBED9Q6R2W3 1325 aa10.15□□□□□ -0.79
TRIM6-201ENST00000278302 GSE1Q14687 1217 aa10.14□□□□□ -0.79
TRIM6-201ENST00000278302 USP35Q9P2H5 1018 aa10.14□□□□□ -0.79
TRIM6-201ENST00000278302 ARID4BQ4LE39 1312 aaPredicted RBP10.14□□□□□ -0.79
TRIM6-201ENST00000278302 CCDC141Q6ZP82 1450 aa10.14□□□□□ -0.79
TRIM6-201ENST00000278302 ARHGEF5Q12774 1597 aa10.13□□□□□ -0.79
TRIM6-201ENST00000278302 ST20-MTHFSA0A0A6YYL1 179 aa10.13□□□□□ -0.79
TRIM6-201ENST00000278302 RGL3Q3MIN7 710 aa10.13□□□□□ -0.79
TRIM6-201ENST00000278302 UHRF1BP1Q6BDS2 1440 aa10.13□□□□□ -0.79
TRIM6-201ENST00000278302 BCORL1Q5H9F3 1711 aa10.12□□□□□ -0.79
TRIM6-201ENST00000278302 FRAT1Q92837 279 aaPredicted RBP10.12□□□□□ -0.79
TRIM6-201ENST00000278302 DHX29Q7Z478 1369 aaKnown RBP10.12□□□□□ -0.79
TRIM6-201ENST00000278302 TMC1Q8TDI8 760 aa10.12□□□□□ -0.79
TRIM6-201ENST00000278302 KDM5CP41229 1560 aa10.12□□□□□ -0.79
TRIM6-201ENST00000278302 RALGAPBQ86X10 1494 aa10.12□□□□□ -0.79
TRIM6-201ENST00000278302 ARHGAP5Q13017 1502 aa10.11□□□□□ -0.79
TRIM6-201ENST00000278302 ROCK2O75116 1388 aaKnown RBP10.11□□□□□ -0.79
TRIM6-201ENST00000278302 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
TRIM6-201ENST00000278302 KDM5DQ9BY66 1539 aa10.11□□□□□ -0.79
TRIM6-201ENST00000278302 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
TRIM6-201ENST00000278302 ARHGEF12Q9NZN5 1544 aa10.1□□□□□ -0.79
TRIM6-201ENST00000278302 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
TRIM6-201ENST00000278302 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
TRIM6-201ENST00000278302 PREX2Q70Z35 1606 aa10.1□□□□□ -0.79
TRIM6-201ENST00000278302 CHD1O14646 1710 aa10.1□□□□□ -0.79
TRIM6-201ENST00000278302 CCDC144AA2RUR9 1427 aa10.1□□□□□ -0.79
TRIM6-201ENST00000278302 SLC4A3P48751 1232 aa10.09□□□□□ -0.79
TRIM6-201ENST00000278302 FAM135AQ9P2D6 1515 aa10.09□□□□□ -0.79
TRIM6-201ENST00000278302 ZMYND15Q9H091 742 aa10.09□□□□□ -0.79
TRIM6-201ENST00000278302 RSPH6AQ9H0K4 717 aa10.09□□□□□ -0.79
TRIM6-201ENST00000278302 SYCP2Q9BX26 1530 aa10.09□□□□□ -0.79
TRIM6-201ENST00000278302 PLEKHG5O94827 1062 aa10.09□□□□□ -0.79
TRIM6-201ENST00000278302 PDE4AP27815 886 aa10.08□□□□□ -0.8
TRIM6-201ENST00000278302 NFKBIBQ15653 356 aa10.08□□□□□ -0.8
TRIM6-201ENST00000278302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRIM6-201ENST00000278302 TTC37Q6PGP7 1564 aa10.06□□□□□ -0.8
TRIM6-201ENST00000278302 SKAP1Q86WV1 359 aa10.06□□□□□ -0.8
TRIM6-201ENST00000278302 NBPF1Q3BBV0 1214 aa10.05□□□□□ -0.8
TRIM6-201ENST00000278302 EFCAB2Q5VUJ9 269 aa10.05□□□□□ -0.8
TRIM6-201ENST00000278302 PNISRQ8TF01 805 aaKnown RBP10.05□□□□□ -0.8
TRIM6-201ENST00000278302 PLEKHH2Q8IVE3 1493 aa10.05□□□□□ -0.8
TRIM6-201ENST00000278302 RALBP1Q15311 655 aa10.05□□□□□ -0.8
TRIM6-201ENST00000278302 NUDCQ9Y266 331 aa10.05□□□□□ -0.8
TRIM6-201ENST00000278302 MYBBP1AQ9BQG0 1328 aaKnown RBP10.04□□□□□ -0.8
TRIM6-201ENST00000278302 ABCC2Q92887 1545 aa10.04□□□□□ -0.8
TRIM6-201ENST00000278302 ERCC6L2Q5T890 1561 aa10.04□□□□□ -0.8
TRIM6-201ENST00000278302 SMG6Q86US8 1419 aaKnown RBP10.04□□□□□ -0.8
TRIM6-201ENST00000278302 PRAG1Q86YV5 1406 aa10.04□□□□□ -0.8
TRIM6-201ENST00000278302 BACH2Q9BYV9 841 aa10.03□□□□□ -0.8
TRIM6-201ENST00000278302 MYO5CQ9NQX4 1742 aa10.03□□□□□ -0.8
TRIM6-201ENST00000278302 SHROOM2Q13796 1616 aa10.03□□□□□ -0.8
TRIM6-201ENST00000278302 GLIPR1L2Q4G1C9 344 aa10.03□□□□□ -0.8
TRIM6-201ENST00000278302 FAM43AQ8N2R8 423 aa10.03□□□□□ -0.8
TRIM6-201ENST00000278302 MAST1Q9Y2H9 1570 aa10.02□□□□□ -0.8
TRIM6-201ENST00000278302 BRD4O60885 1362 aaPredicted RBP10.02□□□□□ -0.81
TRIM6-201ENST00000278302 KTN1Q86UP2 1357 aaKnown RBP10.02□□□□□ -0.81
TRIM6-201ENST00000278302 EXOC6Q8TAG9 804 aa10.01□□□□□ -0.81
TRIM6-201ENST00000278302 PLA2R1Q13018 1463 aa10.01□□□□□ -0.81
TRIM6-201ENST00000278302 DUOX2Q9NRD8 1548 aa10.01□□□□□ -0.81
TRIM6-201ENST00000278302 UNC13BO14795 1591 aa10.01□□□□□ -0.81
TRIM6-201ENST00000278302 PLCH2O75038 1416 aa10.01□□□□□ -0.81
TRIM6-201ENST00000278302 PODXL2Q9NZ53 605 aa10.01□□□□□ -0.81
TRIM6-201ENST00000278302 TCERG1O14776 1098 aaKnown RBP10□□□□□ -0.81
TRIM6-201ENST00000278302 A2MP01023 1474 aa10□□□□□ -0.81
TRIM6-201ENST00000278302 FRAT2O75474 233 aaPredicted RBP10□□□□□ -0.81
TRIM6-201ENST00000278302 TRPM1Q7Z4N2 1603 aa10□□□□□ -0.81
TRIM6-201ENST00000278302 SPAG9O60271 1321 aaKnown RBP9.99□□□□□ -0.81
TRIM6-201ENST00000278302 RNF123Q5XPI4 1314 aa9.99□□□□□ -0.81
TRIM6-201ENST00000278302 PLXNC1O60486 1568 aa9.99□□□□□ -0.81
TRIM6-201ENST00000278302 TMF1P82094 1093 aa9.99□□□□□ -0.81
TRIM6-201ENST00000278302 CC2D1BQ5T0F9 858 aaKnown RBP9.99□□□□□ -0.81
TRIM6-201ENST00000278302 NLRP13Q86W25 1043 aa9.99□□□□□ -0.81
TRIM6-201ENST00000278302 RRAGDQ9NQL2 400 aaPredicted RBP9.99□□□□□ -0.81
TRIM6-201ENST00000278302 AFAP1Q8N556 730 aa9.98□□□□□ -0.81
TRIM6-201ENST00000278302 ERBINQ96RT1 1412 aa9.98□□□□□ -0.81
TRIM6-201ENST00000278302 IQGAP3Q86VI3 1631 aa9.98□□□□□ -0.81
TRIM6-201ENST00000278302 TRAPPC8Q9Y2L5 1435 aa9.98□□□□□ -0.81
TRIM6-201ENST00000278302 PANK3Q9H999 370 aa9.97□□□□□ -0.81
TRIM6-201ENST00000278302 ZCCHC11Q5TAX3 1644 aaKnown RBP9.97□□□□□ -0.81
TRIM6-201ENST00000278302 GPRASP1Q5JY77 1395 aa9.97□□□□□ -0.81
TRIM6-201ENST00000278302 DAXXQ9UER7 740 aaPredicted RBP9.97□□□□□ -0.81
TRIM6-201ENST00000278302 ARXQ96QS3 562 aa9.97□□□□□ -0.81
TRIM6-201ENST00000278302 LRPPRCP42704 1394 aaKnown RBP9.96□□□□□ -0.81
TRIM6-201ENST00000278302 TESK2Q96S53 571 aa9.96□□□□□ -0.81
TRIM6-201ENST00000278302 DISP3Q9P2K9 1392 aa9.96□□□□□ -0.81
TRIM6-201ENST00000278302 PER1O15534 1290 aaPredicted RBP9.96□□□□□ -0.82
TRIM6-201ENST00000278302 DDRGK1Q96HY6 314 aa9.95□□□□□ -0.82
TRIM6-201ENST00000278302 NAP1L5Q96NT1 182 aaPredicted RBP9.95□□□□□ -0.82
TRIM6-201ENST00000278302 PARD3Q8TEW0 1356 aa9.95□□□□□ -0.82
TRIM6-201ENST00000278302 E9PCH4 1651 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms