RNA–Protein interactions for RNA: ENST00000278100.10

BCCIP-201, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCCIP, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-201ENST00000278100 CEP170BQ9Y4F5 1589 aaPredicted RBP18.24■□□□□ 0.51
BCCIP-201ENST00000278100 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
BCCIP-201ENST00000278100 PTPRKQ15262 1439 aa18.23■□□□□ 0.51
BCCIP-201ENST00000278100 KANK4Q5T7N3 995 aaPredicted RBP18.22■□□□□ 0.51
BCCIP-201ENST00000278100 KIAA1107Q9UPP5 1409 aa18.22■□□□□ 0.51
BCCIP-201ENST00000278100 MTUS2Q5JR59 1369 aa18.21■□□□□ 0.51
BCCIP-201ENST00000278100 ADGBQ8N7X0 1667 aa18.21■□□□□ 0.51
BCCIP-201ENST00000278100 ZNF644Q9H582 1327 aaPredicted RBP18.21■□□□□ 0.51
BCCIP-201ENST00000278100 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
BCCIP-201ENST00000278100 TIAM1Q13009 1591 aa18.19■□□□□ 0.5
BCCIP-201ENST00000278100 PLA2R1Q13018 1463 aa18.19■□□□□ 0.5
BCCIP-201ENST00000278100 TCOF1Q13428 1488 aaKnown RBP18.16■□□□□ 0.5
BCCIP-201ENST00000278100 PKD2Q13563 968 aa18.16■□□□□ 0.5
BCCIP-201ENST00000278100 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
BCCIP-201ENST00000278100 VPS8Q8N3P4 1428 aa18.15■□□□□ 0.5
BCCIP-201ENST00000278100 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
BCCIP-201ENST00000278100 DNMT1P26358 1616 aaKnown RBP18.13■□□□□ 0.49
BCCIP-201ENST00000278100 A2ML1A8K2U0 1454 aa18.13■□□□□ 0.49
BCCIP-201ENST00000278100 MBD5Q9P267 1494 aa18.12■□□□□ 0.49
BCCIP-201ENST00000278100 POLR1AO95602 1720 aaPredicted RBP18.12■□□□□ 0.49
BCCIP-201ENST00000278100 FBXO31Q5XUX0 539 aaPredicted RBP18.1■□□□□ 0.49
BCCIP-201ENST00000278100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.492e-7■■■□□ 15.2
BCCIP-201ENST00000278100 TNRQ92752 1358 aa18.08■□□□□ 0.49
BCCIP-201ENST00000278100 KIF3BO15066 747 aa18.08■□□□□ 0.48
BCCIP-201ENST00000278100 PIP4K2BP78356 416 aa18.08■□□□□ 0.48
BCCIP-201ENST00000278100 NEURL4Q96JN8 1562 aa18.08■□□□□ 0.48
BCCIP-201ENST00000278100 DHX29Q7Z478 1369 aaKnown RBP18.07■□□□□ 0.48
BCCIP-201ENST00000278100 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
BCCIP-201ENST00000278100 KDM5DQ9BY66 1539 aa18.06■□□□□ 0.48
BCCIP-201ENST00000278100 CAMSAP2Q08AD1 1489 aa18.06■□□□□ 0.48
BCCIP-201ENST00000278100 CCDC141Q6ZP82 1450 aa18.05■□□□□ 0.48
BCCIP-201ENST00000278100 PZPP20742 1482 aa18.03■□□□□ 0.48
BCCIP-201ENST00000278100 HSPA1LP34931 641 aa18.03■□□□□ 0.48
BCCIP-201ENST00000278100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.03■□□□□ 0.48
BCCIP-201ENST00000278100 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.48
BCCIP-201ENST00000278100 NCOA2Q15596 1464 aa18.02■□□□□ 0.48
BCCIP-201ENST00000278100 SHANK2Q9UPX8 1470 aa18.01■□□□□ 0.47
BCCIP-201ENST00000278100 MED1Q15648 1581 aaPredicted RBP18.01■□□□□ 0.47
BCCIP-201ENST00000278100 CPS1P31327 1500 aa18.01■□□□□ 0.47
BCCIP-201ENST00000278100 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
BCCIP-201ENST00000278100 TOM1O60784 492 aa17.98■□□□□ 0.47
BCCIP-201ENST00000278100 ANKLE2Q86XL3 938 aa17.98■□□□□ 0.47
BCCIP-201ENST00000278100 VWDEQ8N2E2 1590 aa17.98■□□□□ 0.47
BCCIP-201ENST00000278100 UGGT1Q9NYU2 1555 aa17.98■□□□□ 0.47
BCCIP-201ENST00000278100 APLP2Q06481 763 aa17.97■□□□□ 0.47
BCCIP-201ENST00000278100 FAM135AQ9P2D6 1515 aa17.97■□□□□ 0.47
BCCIP-201ENST00000278100 NPHP4O75161 1426 aaPredicted RBP17.96■□□□□ 0.47
BCCIP-201ENST00000278100 MIA2Q96PC5 1412 aa17.96■□□□□ 0.47
BCCIP-201ENST00000278100 NLRP1Q9C000 1473 aa17.95■□□□□ 0.46
BCCIP-201ENST00000278100 IQGAP1P46940 1657 aa17.95■□□□□ 0.46
BCCIP-201ENST00000278100 ARHGEF5Q12774 1597 aa17.95■□□□□ 0.46
BCCIP-201ENST00000278100 THEMISQ8N1K5 641 aaPredicted RBP17.94■□□□□ 0.46
BCCIP-201ENST00000278100 DEPDC5O75140 1603 aa17.93■□□□□ 0.46
BCCIP-201ENST00000278100 STRCP1A6NGW2 1772 aa17.92■□□□□ 0.46
BCCIP-201ENST00000278100 TSPY4P0CV99 314 aa17.92■□□□□ 0.46
BCCIP-201ENST00000278100 TSPY10P0CW01 314 aa17.92■□□□□ 0.46
BCCIP-201ENST00000278100 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
BCCIP-201ENST00000278100 RNF17Q9BXT8 1623 aaKnown RBP17.91■□□□□ 0.46
BCCIP-201ENST00000278100 ALKQ9UM73 1620 aa17.91■□□□□ 0.46
BCCIP-201ENST00000278100 RSPH4AQ5TD94 716 aa17.91■□□□□ 0.46
BCCIP-201ENST00000278100 ABCC3O15438 1527 aa17.91■□□□□ 0.46
BCCIP-201ENST00000278100 MED14O60244 1454 aa17.9■□□□□ 0.46
BCCIP-201ENST00000278100 CEP152O94986 1710 aa17.9■□□□□ 0.46
BCCIP-201ENST00000278100 ZC3H13Q5T200 1668 aaKnown RBP17.9■□□□□ 0.46
BCCIP-201ENST00000278100 ERVK-7P63135 1459 aa17.88■□□□□ 0.45
BCCIP-201ENST00000278100 MAST1Q9Y2H9 1570 aa17.87■□□□□ 0.45
BCCIP-201ENST00000278100 LRRC7Q96NW7 1537 aa17.86■□□□□ 0.45
BCCIP-201ENST00000278100 MROH1Q8NDA8 1641 aa17.86■□□□□ 0.45
BCCIP-201ENST00000278100 EIF2AK4Q9P2K8 1649 aaKnown RBP17.85■□□□□ 0.45
BCCIP-201ENST00000278100 UBR1Q8IWV7 1749 aa17.84■□□□□ 0.45
BCCIP-201ENST00000278100 SYNMO15061 1565 aa17.84■□□□□ 0.45
BCCIP-201ENST00000278100 DSG3P32926 999 aa17.84■□□□□ 0.45
BCCIP-201ENST00000278100 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
BCCIP-201ENST00000278100 CHIC2Q9UKJ5 165 aa17.82■□□□□ 0.44
BCCIP-201ENST00000278100 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
BCCIP-201ENST00000278100 FAM50AQ14320 339 aaKnown RBP17.8■□□□□ 0.44
BCCIP-201ENST00000278100 SCAF11Q99590 1463 aaKnown RBP17.8■□□□□ 0.44
BCCIP-201ENST00000278100 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.44
BCCIP-201ENST00000278100 LTKP29376 864 aa17.77■□□□□ 0.44
BCCIP-201ENST00000278100 XIRP1Q702N8 1843 aaKnown RBP17.77■□□□□ 0.43
BCCIP-201ENST00000278100 ITGAEP38570 1179 aa17.76■□□□□ 0.43
BCCIP-201ENST00000278100 TXNDC2Q86VQ3 553 aa17.76■□□□□ 0.43
BCCIP-201ENST00000278100 CROCC2H7BZ55 1655 aa17.75■□□□□ 0.43
BCCIP-201ENST00000278100 PIK3C2BO00750 1634 aa17.75■□□□□ 0.43
BCCIP-201ENST00000278100 PRDM15P57071 1507 aaPredicted RBP17.74■□□□□ 0.43
BCCIP-201ENST00000278100 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
BCCIP-201ENST00000278100 KIF15Q9NS87 1388 aa17.74■□□□□ 0.43
BCCIP-201ENST00000278100 SLIT1O75093 1534 aa17.73■□□□□ 0.43
BCCIP-201ENST00000278100 ARHGAP23Q9P227 1491 aa17.73■□□□□ 0.43
BCCIP-201ENST00000278100 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
BCCIP-201ENST00000278100 ABCC5O15440 1437 aa17.72■□□□□ 0.43
BCCIP-201ENST00000278100 STAG3Q9UJ98 1225 aa17.71■□□□□ 0.43
BCCIP-201ENST00000278100 EID1Q9Y6B2 187 aa17.71■□□□□ 0.43
BCCIP-201ENST00000278100 PTPN23Q9H3S7 1636 aa17.7■□□□□ 0.42
BCCIP-201ENST00000278100 CAPN15O75808 1086 aa17.69■□□□□ 0.42
BCCIP-201ENST00000278100 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
BCCIP-201ENST00000278100 ARHGAP31Q2M1Z3 1444 aa17.68■□□□□ 0.42
BCCIP-201ENST00000278100 RBM33Q96EV2 1170 aaKnown RBP17.67■□□□□ 0.42
BCCIP-201ENST00000278100 RGS17Q9UGC6 210 aaPredicted RBP17.67■□□□□ 0.42
BCCIP-201ENST00000278100 TMEM2Q9UHN6 1383 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms