RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.5□□□□□ -1.69
HERC4-201ENST00000277817 AMHR2Q16671 573 aa4.5□□□□□ -1.69
HERC4-201ENST00000277817 ZFP91Q96JP5 570 aaPredicted RBP4.5□□□□□ -1.69
HERC4-201ENST00000277817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.5□□□□□ -1.69
HERC4-201ENST00000277817 PLXNC1O60486 1568 aa4.5□□□□□ -1.69
HERC4-201ENST00000277817 LAMC1P11047 1609 aa4.5□□□□□ -1.69
HERC4-201ENST00000277817 ARHGEF12Q9NZN5 1544 aa4.5□□□□□ -1.69
HERC4-201ENST00000277817 SRPK2P78362 688 aaKnown RBP4.49□□□□□ -1.69
HERC4-201ENST00000277817 FBXO22Q8NEZ5 403 aa4.49□□□□□ -1.69
HERC4-201ENST00000277817 TMUB1Q9BVT8 246 aa4.49□□□□□ -1.69
HERC4-201ENST00000277817 MFRPQ9BY79 579 aa4.49□□□□□ -1.69
HERC4-201ENST00000277817 PTPN23Q9H3S7 1636 aa4.49□□□□□ -1.69
HERC4-201ENST00000277817 OSCARQ8IYS5 282 aa4.49□□□□□ -1.69
HERC4-201ENST00000277817 IL27Q8NEV9 243 aa4.48□□□□□ -1.69
HERC4-201ENST00000277817 ITSN2Q9NZM3 1697 aa4.48□□□□□ -1.69
HERC4-201ENST00000277817 MCM6Q14566 821 aa4.48□□□□□ -1.69
HERC4-201ENST00000277817 ZBTB47Q9UFB7 747 aaPredicted RBP4.48□□□□□ -1.69
HERC4-201ENST00000277817 AGLP35573 1532 aa4.48□□□□□ -1.69
HERC4-201ENST00000277817 PHLDB1Q86UU1 1377 aa4.47□□□□□ -1.69
HERC4-201ENST00000277817 PLSCR2Q9NRY7 297 aa4.47□□□□□ -1.69
HERC4-201ENST00000277817 RAD54L2Q9Y4B4 1467 aa4.47□□□□□ -1.69
HERC4-201ENST00000277817 E2F4Q16254 413 aa4.46□□□□□ -1.69
HERC4-201ENST00000277817 SOGA1O94964 1423 aa4.46□□□□□ -1.7
HERC4-201ENST00000277817 CIZ1Q9ULV3 898 aaPredicted RBP4.46□□□□□ -1.7
HERC4-201ENST00000277817 PLB1Q6P1J6 1458 aa4.46□□□□□ -1.7
HERC4-201ENST00000277817 BCL11BQ9C0K0 894 aaPredicted RBP4.46□□□□□ -1.7
HERC4-201ENST00000277817 MFAP1P55081 439 aaKnown RBP4.45□□□□□ -1.7
HERC4-201ENST00000277817 DEPDC5O75140 1603 aa4.45□□□□□ -1.7
HERC4-201ENST00000277817 STK25O00506 426 aa4.45□□□□□ -1.7
HERC4-201ENST00000277817 CLUAP1Q96AJ1 413 aa4.45□□□□□ -1.7
HERC4-201ENST00000277817 KIF14Q15058 1648 aa4.45□□□□□ -1.7
HERC4-201ENST00000277817 NEURL4Q96JN8 1562 aa4.45□□□□□ -1.7
HERC4-201ENST00000277817 CRISPLD2Q9H0B8 497 aa4.45□□□□□ -1.7
HERC4-201ENST00000277817 POLR1AO95602 1720 aaPredicted RBP4.45□□□□□ -1.7
HERC4-201ENST00000277817 FAM9AQ8IZU1 332 aaPredicted RBP4.44□□□□□ -1.7
HERC4-201ENST00000277817 PCGF6Q9BYE7 350 aa4.44□□□□□ -1.7
HERC4-201ENST00000277817 PPP1R37O75864 691 aa4.44□□□□□ -1.7
HERC4-201ENST00000277817 KIF21BO75037 1637 aa4.44□□□□□ -1.7
HERC4-201ENST00000277817 NEO1Q92859 1461 aa4.44□□□□□ -1.7
HERC4-201ENST00000277817 SPDYE2BA6NHP3 402 aa4.44□□□□□ -1.7
HERC4-201ENST00000277817 UNCXA6NJT0 531 aa4.44□□□□□ -1.7
HERC4-201ENST00000277817 SPDYE6P0CI01 402 aa4.44□□□□□ -1.7
HERC4-201ENST00000277817 SPDYE2Q495Y8 402 aa4.44□□□□□ -1.7
HERC4-201ENST00000277817 ZC3H13Q5T200 1668 aaKnown RBP4.44□□□□□ -1.7
HERC4-201ENST00000277817 ALKQ9UM73 1620 aa4.44□□□□□ -1.7
HERC4-201ENST00000277817 ZNF692Q9BU19 519 aaPredicted RBP4.44□□□□□ -1.7
HERC4-201ENST00000277817 SOCS7O14512 581 aa4.43□□□□□ -1.7
HERC4-201ENST00000277817 EIF5BO60841 1220 aaKnown RBP4.43□□□□□ -1.7
HERC4-201ENST00000277817 PLCD3Q8N3E9 789 aa4.43□□□□□ -1.7
HERC4-201ENST00000277817 MAGI2Q86UL8 1455 aa4.43□□□□□ -1.7
HERC4-201ENST00000277817 RAD21O60216 631 aa4.43□□□□□ -1.7
HERC4-201ENST00000277817 LTBP4Q8N2S1 1624 aa4.43□□□□□ -1.7
HERC4-201ENST00000277817 HSP90B1P14625 803 aaKnown RBP4.43□□□□□ -1.7
HERC4-201ENST00000277817 RETREG2Q8NC44 543 aa4.43□□□□□ -1.7
HERC4-201ENST00000277817 ZBTB12Q9Y330 459 aaPredicted RBP4.43□□□□□ -1.7
HERC4-201ENST00000277817 XIRP1Q702N8 1843 aaKnown RBP4.43□□□□□ -1.7
HERC4-201ENST00000277817 EFCAB5A4FU69 1503 aa4.42□□□□□ -1.7
HERC4-201ENST00000277817 MIER1Q8N108 512 aa4.42□□□□□ -1.7
HERC4-201ENST00000277817 TEX14Q8IWB6 1497 aa4.42□□□□□ -1.7
HERC4-201ENST00000277817 INO80Q9ULG1 1556 aaPredicted RBP4.42□□□□□ -1.7
HERC4-201ENST00000277817 PREX2Q70Z35 1606 aa4.42□□□□□ -1.7
HERC4-201ENST00000277817 MROH1Q8NDA8 1641 aa4.42□□□□□ -1.7
HERC4-201ENST00000277817 SYNMO15061 1565 aa4.42□□□□□ -1.7
HERC4-201ENST00000277817 RNF17Q9BXT8 1623 aaKnown RBP4.42□□□□□ -1.7
HERC4-201ENST00000277817 RAPGEF6Q8TEU7 1601 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 C3P01024 1663 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 ARID3AQ99856 593 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 CDC42BPBQ9Y5S2 1711 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 PRXQ9BXM0 1461 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 CHMP4AQ9BY43 222 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 MYO5CQ9NQX4 1742 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 SERPINA10Q9UK55 444 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 ADGBQ8N7X0 1667 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 MAST1Q9Y2H9 1570 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 FOXD4L5Q5VV16 416 aaPredicted RBP4.41□□□□□ -1.7
HERC4-201ENST00000277817 CCDC125Q86Z20 511 aa4.41□□□□□ -1.7
HERC4-201ENST00000277817 FOXD4L4Q8WXT5 416 aaPredicted RBP4.41□□□□□ -1.7
HERC4-201ENST00000277817 EIF2AK4Q9P2K8 1649 aaKnown RBP4.4□□□□□ -1.7
HERC4-201ENST00000277817 PARP9Q8IXQ6 854 aa4.4□□□□□ -1.7
HERC4-201ENST00000277817 PLEKHG5O94827 1062 aa4.4□□□□□ -1.7
HERC4-201ENST00000277817 MLLT3P42568 568 aaPredicted RBP4.4□□□□□ -1.7
HERC4-201ENST00000277817 RBM26Q5T8P6 1007 aaKnown RBP4.4□□□□□ -1.7
HERC4-201ENST00000277817 PROSER2Q86WR7 435 aaPredicted RBP4.4□□□□□ -1.71
HERC4-201ENST00000277817 CREBZFQ9NS37 354 aa4.4□□□□□ -1.71
HERC4-201ENST00000277817 WRNQ14191 1432 aaPredicted RBP eCLIP4.39□□□□□ -1.711e-6■■■■■ 58.5
HERC4-201ENST00000277817 FHOD3Q2V2M9 1422 aa4.39□□□□□ -1.71
HERC4-201ENST00000277817 NOM1Q5C9Z4 860 aaKnown RBP4.39□□□□□ -1.71
HERC4-201ENST00000277817 TXNDC2Q86VQ3 553 aa4.39□□□□□ -1.71
HERC4-201ENST00000277817 DDRGK1Q96HY6 314 aa4.39□□□□□ -1.71
HERC4-201ENST00000277817 COL17A1Q9UMD9 1497 aaPredicted RBP4.39□□□□□ -1.71
HERC4-201ENST00000277817 ZNF316A6NFI3 1004 aaPredicted RBP4.39□□□□□ -1.71
HERC4-201ENST00000277817 POM121Q96HA1 1249 aa4.39□□□□□ -1.71
HERC4-201ENST00000277817 RBM47A0AV96 593 aaKnown RBP4.39□□□□□ -1.71
HERC4-201ENST00000277817 KCNA1Q09470 495 aa4.39□□□□□ -1.71
HERC4-201ENST00000277817 FBXO31Q5XUX0 539 aaPredicted RBP4.39□□□□□ -1.71
HERC4-201ENST00000277817 MAP3K1Q13233 1512 aa4.38□□□□□ -1.71
HERC4-201ENST00000277817 RASEFQ8IZ41 740 aa4.38□□□□□ -1.71
HERC4-201ENST00000277817 STK24Q9Y6E0 443 aa4.38□□□□□ -1.71
HERC4-201ENST00000277817 ADGRL1O94910 1474 aa4.38□□□□□ -1.71
HERC4-201ENST00000277817 CDC42BPAQ5VT25 1732 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms