RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 H3BQV1 296 aa10.73□□□□□ -0.69
SCUBE3-201ENST00000274938 IFFO2Q5TF58 517 aa10.73□□□□□ -0.69
SCUBE3-201ENST00000274938 CCAR2Q8N163 923 aaKnown RBP10.72□□□□□ -0.69
SCUBE3-201ENST00000274938 IPO7O95373 1038 aaKnown RBP10.72□□□□□ -0.69
SCUBE3-201ENST00000274938 CREBRFQ8IUR6 639 aa10.72□□□□□ -0.69
SCUBE3-201ENST00000274938 ARHGAP35Q9NRY4 1499 aa10.71□□□□□ -0.69
SCUBE3-201ENST00000274938 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
SCUBE3-201ENST00000274938 FAM184AQ8NB25 1140 aa10.7□□□□□ -0.7
SCUBE3-201ENST00000274938 ANKRD20A12PQ8NF67 263 aa10.7□□□□□ -0.7
SCUBE3-201ENST00000274938 RRP12Q5JTH9 1297 aaKnown RBP10.7□□□□□ -0.7
SCUBE3-201ENST00000274938 FAM43AQ8N2R8 423 aa10.7□□□□□ -0.7
SCUBE3-201ENST00000274938 CHMP5Q9NZZ3 219 aa10.7□□□□□ -0.7
SCUBE3-201ENST00000274938 PKD2Q13563 968 aa10.7□□□□□ -0.7
SCUBE3-201ENST00000274938 TAF7LQ5H9L4 462 aa10.7□□□□□ -0.7
SCUBE3-201ENST00000274938 AK7Q96M32 723 aa10.69□□□□□ -0.7
SCUBE3-201ENST00000274938 CGNL1Q0VF96 1302 aa10.69□□□□□ -0.7
SCUBE3-201ENST00000274938 TMX4Q9H1E5 349 aaPredicted RBP10.69□□□□□ -0.7
SCUBE3-201ENST00000274938 FAM13BQ9NYF5 915 aa10.69□□□□□ -0.7
SCUBE3-201ENST00000274938 MARCH6O60337 910 aa10.69□□□□□ -0.7
SCUBE3-201ENST00000274938 PES1O00541 588 aaKnown RBP10.68□□□□□ -0.7
SCUBE3-201ENST00000274938 CCDC47Q96A33 483 aaKnown RBP10.68□□□□□ -0.7
SCUBE3-201ENST00000274938 PDE4CQ08493 712 aa10.68□□□□□ -0.7
SCUBE3-201ENST00000274938 TERF2IPQ9NYB0 399 aa10.68□□□□□ -0.7
SCUBE3-201ENST00000274938 ZNF592Q92610 1267 aa10.68□□□□□ -0.7
SCUBE3-201ENST00000274938 DIAPH3Q9NSV4 1193 aa10.68□□□□□ -0.7
SCUBE3-201ENST00000274938 CWC15Q9P013 229 aaKnown RBP10.68□□□□□ -0.7
SCUBE3-201ENST00000274938 KIF15Q9NS87 1388 aa10.67□□□□□ -0.7
SCUBE3-201ENST00000274938 SOX12O15370 315 aa10.67□□□□□ -0.7
SCUBE3-201ENST00000274938 HOOK1Q9UJC3 728 aaKnown RBP10.67□□□□□ -0.7
SCUBE3-201ENST00000274938 REC8O95072 547 aa10.67□□□□□ -0.7
SCUBE3-201ENST00000274938 CPLX2Q6PUV4 134 aaKnown RBP10.67□□□□□ -0.7
SCUBE3-201ENST00000274938 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
SCUBE3-201ENST00000274938 MYBBP1AQ9BQG0 1328 aaKnown RBP10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 LRRFIP1Q32MZ4 808 aaKnown RBP10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 CCDC66A2RUB6 948 aa10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 CLUAP1Q96AJ1 413 aa10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 RUFY1Q96T51 708 aa10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 HOMER1Q86YM7 354 aa10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 RUFY2Q8WXA3 655 aa10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 AKAP17AQ02040 695 aaKnown RBP10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 HSP90B2PQ58FF3 399 aa10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 FOXD4L5Q5VV16 416 aaPredicted RBP10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 FOXD4L4Q8WXT5 416 aaPredicted RBP10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 NUCB2P80303 420 aa10.66□□□□□ -0.7
SCUBE3-201ENST00000274938 CHMP3Q9Y3E7 222 aa10.65□□□□□ -0.7
SCUBE3-201ENST00000274938 MNS1Q8NEH6 495 aa10.65□□□□□ -0.7
SCUBE3-201ENST00000274938 NGEFQ8N5V2 710 aa10.65□□□□□ -0.7
SCUBE3-201ENST00000274938 ZKSCAN2Q63HK3 967 aa10.65□□□□□ -0.7
SCUBE3-201ENST00000274938 TOMM22Q9NS69 142 aa10.65□□□□□ -0.7
SCUBE3-201ENST00000274938 PATL2C9JE40 543 aaKnown RBP10.65□□□□□ -0.7
SCUBE3-201ENST00000274938 E9PSI1 815 aa10.65□□□□□ -0.7
SCUBE3-201ENST00000274938 RRP1P56182 461 aaKnown RBP10.65□□□□□ -0.7
SCUBE3-201ENST00000274938 CCDC39Q9UFE4 941 aa10.65□□□□□ -0.7
SCUBE3-201ENST00000274938 SLC4A10Q6U841 1118 aa10.65□□□□□ -0.71
SCUBE3-201ENST00000274938 SYNE3Q6ZMZ3 975 aa10.65□□□□□ -0.71
SCUBE3-201ENST00000274938 ERCC4Q92889 916 aaPredicted RBP10.64□□□□□ -0.71
SCUBE3-201ENST00000274938 FMN1Q68DA7 1419 aa10.64□□□□□ -0.71
SCUBE3-201ENST00000274938 MPHOSPH9Q99550 1183 aa10.64□□□□□ -0.71
SCUBE3-201ENST00000274938 DCTN1Q14203 1278 aa10.64□□□□□ -0.71
SCUBE3-201ENST00000274938 MRE11P49959 708 aa10.64□□□□□ -0.71
SCUBE3-201ENST00000274938 ZKSCAN1P17029 563 aaPredicted RBP10.64□□□□□ -0.71
SCUBE3-201ENST00000274938 RAB3GAP2Q9H2M9 1393 aa10.63□□□□□ -0.71
SCUBE3-201ENST00000274938 SAFB2Q14151 953 aaKnown RBP eCLIP10.63□□□□□ -0.71
SCUBE3-201ENST00000274938 ZBED9Q6R2W3 1325 aa10.63□□□□□ -0.71
SCUBE3-201ENST00000274938 TRIM29Q14134 588 aa10.63□□□□□ -0.71
SCUBE3-201ENST00000274938 CSB-PGBD3P0DP91 1061 aa10.63□□□□□ -0.71
SCUBE3-201ENST00000274938 AAMPQ13685 434 aa10.63□□□□□ -0.71
SCUBE3-201ENST00000274938 CCDC191Q8NCU4 936 aa10.63□□□□□ -0.71
SCUBE3-201ENST00000274938 ANKRD30AQ9BXX3 1397 aa10.63□□□□□ -0.71
SCUBE3-201ENST00000274938 ANKRD45Q5TZF3 282 aa10.62□□□□□ -0.71
SCUBE3-201ENST00000274938 SASS6Q6UVJ0 657 aa10.61□□□□□ -0.71
SCUBE3-201ENST00000274938 PCMTD1Q96MG8 357 aaPredicted RBP10.61□□□□□ -0.71
SCUBE3-201ENST00000274938 RILPL2Q969X0 211 aa10.61□□□□□ -0.71
SCUBE3-201ENST00000274938 ZNF330Q9Y3S2 320 aaPredicted RBP10.61□□□□□ -0.71
SCUBE3-201ENST00000274938 BICD2Q8TD16 824 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 STK26Q9P289 416 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 CCDC146Q8IYE0 955 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 DDX19BQ9UMR2 479 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 CARMIL1Q5VZK9 1371 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 MCTP1Q6DN14 999 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 NUP155O75694 1391 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 IFT57Q9NWB7 429 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 BAZ1BQ9UIG0 1483 aaKnown RBP10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 VPS53Q5VIR6 699 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 RDXP35241 583 aaKnown RBP10.6□□□□□ -0.71
SCUBE3-201ENST00000274938 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
SCUBE3-201ENST00000274938 LETM1O95202 739 aaPredicted RBP10.59□□□□□ -0.71
SCUBE3-201ENST00000274938 EXOC6Q8TAG9 804 aa10.59□□□□□ -0.71
SCUBE3-201ENST00000274938 HMGN5P82970 282 aaKnown RBP10.59□□□□□ -0.71
SCUBE3-201ENST00000274938 CCP110O43303 1012 aa10.59□□□□□ -0.71
SCUBE3-201ENST00000274938 PRKCSHP14314 528 aaPredicted RBP10.59□□□□□ -0.71
SCUBE3-201ENST00000274938 ROCK1Q13464 1354 aa10.59□□□□□ -0.71
SCUBE3-201ENST00000274938 CCDC73Q6ZRK6 1079 aa10.59□□□□□ -0.71
SCUBE3-201ENST00000274938 PODXL2Q9NZ53 605 aa10.59□□□□□ -0.71
SCUBE3-201ENST00000274938 NAT10Q9H0A0 1025 aaKnown RBP10.58□□□□□ -0.72
SCUBE3-201ENST00000274938 ANO8Q9HCE9 1232 aaPredicted RBP10.58□□□□□ -0.72
SCUBE3-201ENST00000274938 DHX8Q14562 1220 aaKnown RBP10.58□□□□□ -0.72
SCUBE3-201ENST00000274938 CRBNQ96SW2 442 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms