RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 PRG4Q92954 1404 aaPredicted RBP12.1□□□□□ -0.47
HMGCLL1-201ENST00000274901 POGKQ9P215 609 aa12.09□□□□□ -0.47
HMGCLL1-201ENST00000274901 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
HMGCLL1-201ENST00000274901 C8orf34Q49A92 452 aa12.08□□□□□ -0.48
HMGCLL1-201ENST00000274901 C20orf194Q5TEA3 1177 aa12.08□□□□□ -0.48
HMGCLL1-201ENST00000274901 MIA2Q96PC5 1412 aa12.07□□□□□ -0.48
HMGCLL1-201ENST00000274901 USP47Q96K76 1375 aa12.06□□□□□ -0.48
HMGCLL1-201ENST00000274901 KDM2BQ8NHM5 1336 aa12.06□□□□□ -0.48
HMGCLL1-201ENST00000274901 ARHGEF11O15085 1522 aa12.05□□□□□ -0.48
HMGCLL1-201ENST00000274901 PTPRGP23470 1445 aa12.04□□□□□ -0.48
HMGCLL1-201ENST00000274901 TCOF1Q13428 1488 aaKnown RBP12.04□□□□□ -0.48
HMGCLL1-201ENST00000274901 ZNF644Q9H582 1327 aaPredicted RBP12.03□□□□□ -0.48
HMGCLL1-201ENST00000274901 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
HMGCLL1-201ENST00000274901 KDM5CP41229 1560 aa12.03□□□□□ -0.48
HMGCLL1-201ENST00000274901 ZNF326Q5BKZ1 582 aaKnown RBP12.02□□□□□ -0.48
HMGCLL1-201ENST00000274901 BRD4O60885 1362 aaPredicted RBP12.02□□□□□ -0.48
HMGCLL1-201ENST00000274901 MYBBP1AQ9BQG0 1328 aaKnown RBP12.02□□□□□ -0.49
HMGCLL1-201ENST00000274901 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
HMGCLL1-201ENST00000274901 FAM161AQ3B820 660 aa12.01□□□□□ -0.49
HMGCLL1-201ENST00000274901 KIF15Q9NS87 1388 aa12□□□□□ -0.49
HMGCLL1-201ENST00000274901 ZNF777Q9ULD5 760 aaPredicted RBP12□□□□□ -0.49
HMGCLL1-201ENST00000274901 PLEKHD1A6NEE1 506 aa12□□□□□ -0.49
HMGCLL1-201ENST00000274901 ABCA8O94911 1581 aa12□□□□□ -0.49
HMGCLL1-201ENST00000274901 TROQ12816 1431 aaPredicted RBP12□□□□□ -0.49
HMGCLL1-201ENST00000274901 KTN1Q86UP2 1357 aaKnown RBP11.99□□□□□ -0.49
HMGCLL1-201ENST00000274901 ATP10BO94823 1461 aa11.99□□□□□ -0.49
HMGCLL1-201ENST00000274901 GLIPR1L2Q4G1C9 344 aa11.99□□□□□ -0.49
HMGCLL1-201ENST00000274901 ARXQ96QS3 562 aa11.99□□□□□ -0.49
HMGCLL1-201ENST00000274901 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
HMGCLL1-201ENST00000274901 USP19O94966 1318 aa11.98□□□□□ -0.49
HMGCLL1-201ENST00000274901 KIF14Q15058 1648 aa11.98□□□□□ -0.49
HMGCLL1-201ENST00000274901 RGS3P49796 1198 aa11.97□□□□□ -0.49
HMGCLL1-201ENST00000274901 PDE3BQ13370 1112 aa11.97□□□□□ -0.49
HMGCLL1-201ENST00000274901 CFDP1Q9UEE9 299 aaPredicted RBP11.97□□□□□ -0.49
HMGCLL1-201ENST00000274901 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
HMGCLL1-201ENST00000274901 PANK2Q9BZ23 570 aa11.96□□□□□ -0.49
HMGCLL1-201ENST00000274901 HSP90AA2PQ14568 343 aaPredicted RBP11.96□□□□□ -0.5
HMGCLL1-201ENST00000274901 E9PCH4 1651 aa11.95□□□□□ -0.5
HMGCLL1-201ENST00000274901 SHROOM2Q13796 1616 aa11.95□□□□□ -0.5
HMGCLL1-201ENST00000274901 XRCC6P12956 609 aaKnown RBP eCLIP11.95□□□□□ -0.5
HMGCLL1-201ENST00000274901 CENPQQ7L2Z9 268 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-201ENST00000274901 ARID4BQ4LE39 1312 aaPredicted RBP11.95□□□□□ -0.5
HMGCLL1-201ENST00000274901 RALBP1Q15311 655 aa11.95□□□□□ -0.5
HMGCLL1-201ENST00000274901 SLKQ9H2G2 1235 aaPredicted RBP11.94□□□□□ -0.5
HMGCLL1-201ENST00000274901 PZPP20742 1482 aa11.94□□□□□ -0.5
HMGCLL1-201ENST00000274901 ROCK2O75116 1388 aaKnown RBP11.94□□□□□ -0.5
HMGCLL1-201ENST00000274901 SEC24BO95487 1268 aa11.94□□□□□ -0.5
HMGCLL1-201ENST00000274901 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
HMGCLL1-201ENST00000274901 GPATCH8Q9UKJ3 1502 aaKnown RBP11.93□□□□□ -0.5
HMGCLL1-201ENST00000274901 RRP9O43818 475 aaKnown RBP11.93□□□□□ -0.5
HMGCLL1-201ENST00000274901 PARD3Q8TEW0 1356 aa11.92□□□□□ -0.5
HMGCLL1-201ENST00000274901 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
HMGCLL1-201ENST00000274901 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
HMGCLL1-201ENST00000274901 HSP90AA1P07900 732 aaKnown RBP11.92□□□□□ -0.5
HMGCLL1-201ENST00000274901 ST20-MTHFSA0A0A6YYL1 179 aa11.92□□□□□ -0.5
HMGCLL1-201ENST00000274901 CLCN1P35523 988 aa11.92□□□□□ -0.5
HMGCLL1-201ENST00000274901 NLRP13Q86W25 1043 aa11.92□□□□□ -0.5
HMGCLL1-201ENST00000274901 BLMP54132 1417 aaPredicted RBP11.91□□□□□ -0.5
HMGCLL1-201ENST00000274901 ABCC5O15440 1437 aa11.91□□□□□ -0.5
HMGCLL1-201ENST00000274901 DAPK1P53355 1430 aa11.91□□□□□ -0.5
HMGCLL1-201ENST00000274901 L1TD1Q5T7N2 865 aaKnown RBP11.91□□□□□ -0.5
HMGCLL1-201ENST00000274901 ANTXR1Q9H6X2 564 aa11.91□□□□□ -0.5
HMGCLL1-201ENST00000274901 FSD2A1L4K1 749 aa11.9□□□□□ -0.5
HMGCLL1-201ENST00000274901 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
HMGCLL1-201ENST00000274901 CAMSAP2Q08AD1 1489 aa11.89□□□□□ -0.51
HMGCLL1-201ENST00000274901 CARD11Q9BXL7 1154 aa11.89□□□□□ -0.51
HMGCLL1-201ENST00000274901 RALGAPBQ86X10 1494 aa11.89□□□□□ -0.51
HMGCLL1-201ENST00000274901 NLRP1Q9C000 1473 aa11.89□□□□□ -0.51
HMGCLL1-201ENST00000274901 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
HMGCLL1-201ENST00000274901 ADCY10Q96PN6 1610 aa11.88□□□□□ -0.51
HMGCLL1-201ENST00000274901 ZMYM4Q5VZL5 1548 aa11.88□□□□□ -0.51
HMGCLL1-201ENST00000274901 ABCC10Q5T3U5 1492 aa11.88□□□□□ -0.51
HMGCLL1-201ENST00000274901 ROCK1Q13464 1354 aa11.88□□□□□ -0.51
HMGCLL1-201ENST00000274901 GZF1Q9H116 711 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-201ENST00000274901 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
HMGCLL1-201ENST00000274901 DNMT1P26358 1616 aaKnown RBP11.86□□□□□ -0.51
HMGCLL1-201ENST00000274901 PLEKHH1Q9ULM0 1364 aa11.86□□□□□ -0.51
HMGCLL1-201ENST00000274901 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
HMGCLL1-201ENST00000274901 HNRNPMP52272 730 aaKnown RBP eCLIP11.86□□□□□ -0.51
HMGCLL1-201ENST00000274901 ITSN2Q9NZM3 1697 aa11.86□□□□□ -0.51
HMGCLL1-201ENST00000274901 ABCC2Q92887 1545 aa11.86□□□□□ -0.51
HMGCLL1-201ENST00000274901 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
HMGCLL1-201ENST00000274901 GOLGA6L3A6NEY3 463 aa11.85□□□□□ -0.51
HMGCLL1-201ENST00000274901 IGHDP01880 384 aa11.85□□□□□ -0.51
HMGCLL1-201ENST00000274901 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
HMGCLL1-201ENST00000274901 CDC42BPAQ5VT25 1732 aa11.85□□□□□ -0.51
HMGCLL1-201ENST00000274901 CC2D1BQ5T0F9 858 aaKnown RBP11.85□□□□□ -0.51
HMGCLL1-201ENST00000274901 PODXL2Q9NZ53 605 aa11.85□□□□□ -0.51
HMGCLL1-201ENST00000274901 KIAA1107Q9UPP5 1409 aa11.85□□□□□ -0.51
HMGCLL1-201ENST00000274901 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
HMGCLL1-201ENST00000274901 PKD2Q13563 968 aa11.83□□□□□ -0.52
HMGCLL1-201ENST00000274901 KDM2AQ9Y2K7 1162 aa11.83□□□□□ -0.52
HMGCLL1-201ENST00000274901 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
HMGCLL1-201ENST00000274901 ADAMTS8Q9UP79 889 aa11.82□□□□□ -0.52
HMGCLL1-201ENST00000274901 TBC1D2Q9BYX2 928 aa11.81□□□□□ -0.52
HMGCLL1-201ENST00000274901 PLEKHH2Q8IVE3 1493 aa11.8□□□□□ -0.52
HMGCLL1-201ENST00000274901 TTC37Q6PGP7 1564 aa11.8□□□□□ -0.52
HMGCLL1-201ENST00000274901 MCM4P33991 863 aa11.8□□□□□ -0.52
HMGCLL1-201ENST00000274901 BECN1Q14457 450 aa11.8□□□□□ -0.52
HMGCLL1-201ENST00000274901 ZNF521Q96K83 1311 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms