RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 AGLP35573 1532 aa14.05□□□□□ -0.16
RPS3A-201ENST00000274065 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
RPS3A-201ENST00000274065 EVX2Q03828 476 aa14.05□□□□□ -0.16
RPS3A-201ENST00000274065 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
RPS3A-201ENST00000274065 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
RPS3A-201ENST00000274065 TROQ12816 1431 aaPredicted RBP14.02□□□□□ -0.16
RPS3A-201ENST00000274065 C19orf67A6NJJ6 358 aa14.02□□□□□ -0.17
RPS3A-201ENST00000274065 CDK11AQ9UQ88 783 aaPredicted RBP14.02□□□□□ -0.17
RPS3A-201ENST00000274065 NPATQ14207 1427 aa14.01□□□□□ -0.17
RPS3A-201ENST00000274065 HSPA1LP34931 641 aa14.01□□□□□ -0.17
RPS3A-201ENST00000274065 MED1Q15648 1581 aaPredicted RBP14□□□□□ -0.17
RPS3A-201ENST00000274065 ZMYM3Q14202 1370 aa13.99□□□□□ -0.17
RPS3A-201ENST00000274065 EEA1Q15075 1411 aa13.98□□□□□ -0.17
RPS3A-201ENST00000274065 PKD2Q13563 968 aa13.98□□□□□ -0.17
RPS3A-201ENST00000274065 ABCC1P33527 1531 aa13.98□□□□□ -0.17
RPS3A-201ENST00000274065 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
RPS3A-201ENST00000274065 TCOF1Q13428 1488 aaKnown RBP13.97□□□□□ -0.17
RPS3A-201ENST00000274065 CLIP1P30622 1438 aa13.97□□□□□ -0.17
RPS3A-201ENST00000274065 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.17
RPS3A-201ENST00000274065 PLA2R1Q13018 1463 aa13.96□□□□□ -0.17
RPS3A-201ENST00000274065 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
RPS3A-201ENST00000274065 CDC42BPBQ9Y5S2 1711 aa13.95□□□□□ -0.18
RPS3A-201ENST00000274065 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
RPS3A-201ENST00000274065 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
RPS3A-201ENST00000274065 MROH2AA6NES4 1674 aa13.94□□□□□ -0.18
RPS3A-201ENST00000274065 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
RPS3A-201ENST00000274065 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
RPS3A-201ENST00000274065 PTPRKQ15262 1439 aa13.92□□□□□ -0.18
RPS3A-201ENST00000274065 PREX2Q70Z35 1606 aa13.92□□□□□ -0.18
RPS3A-201ENST00000274065 MYO3AQ8NEV4 1616 aa13.92□□□□□ -0.18
RPS3A-201ENST00000274065 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
RPS3A-201ENST00000274065 TOM1O60784 492 aa13.9□□□□□ -0.18
RPS3A-201ENST00000274065 SAMD9LQ8IVG5 1584 aa13.9□□□□□ -0.18
RPS3A-201ENST00000274065 FARP1Q9Y4F1 1045 aaPredicted RBP13.89□□□□□ -0.19
RPS3A-201ENST00000274065 LRRIQ1Q96JM4 1722 aa13.89□□□□□ -0.19
RPS3A-201ENST00000274065 UBTFP17480 764 aaKnown RBP13.88□□□□□ -0.19
RPS3A-201ENST00000274065 CLTCQ00610 1675 aaKnown RBP13.88□□□□□ -0.19
RPS3A-201ENST00000274065 SPAG9O60271 1321 aaKnown RBP13.88□□□□□ -0.19
RPS3A-201ENST00000274065 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.193e-8■■■□□ 16.8
RPS3A-201ENST00000274065 GGT6Q6P531 493 aa13.87□□□□□ -0.19
RPS3A-201ENST00000274065 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
RPS3A-201ENST00000274065 SUPT6HQ7KZ85 1726 aaKnown RBP13.87□□□□□ -0.19
RPS3A-201ENST00000274065 CPS1P31327 1500 aa13.85□□□□□ -0.19
RPS3A-201ENST00000274065 SYCP2Q9BX26 1530 aa13.85□□□□□ -0.19
RPS3A-201ENST00000274065 A2ML1A8K2U0 1454 aa13.85□□□□□ -0.19
RPS3A-201ENST00000274065 SHANK2Q9UPX8 1470 aa13.85□□□□□ -0.19
RPS3A-201ENST00000274065 PLXNC1O60486 1568 aa13.84□□□□□ -0.19
RPS3A-201ENST00000274065 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
RPS3A-201ENST00000274065 A2MP01023 1474 aa13.84□□□□□ -0.19
RPS3A-201ENST00000274065 DNMT1P26358 1616 aaKnown RBP13.83□□□□□ -0.2
RPS3A-201ENST00000274065 PROM2Q8N271 834 aa13.83□□□□□ -0.2
RPS3A-201ENST00000274065 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
RPS3A-201ENST00000274065 CDC42BPAQ5VT25 1732 aa13.83□□□□□ -0.2
RPS3A-201ENST00000274065 ATP7AQ04656 1500 aa13.83□□□□□ -0.2
RPS3A-201ENST00000274065 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.2
RPS3A-201ENST00000274065 GPATCH8Q9UKJ3 1502 aaKnown RBP13.8□□□□□ -0.2
RPS3A-201ENST00000274065 RGS17Q9UGC6 210 aaPredicted RBP13.8□□□□□ -0.2
RPS3A-201ENST00000274065 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
RPS3A-201ENST00000274065 VWDEQ8N2E2 1590 aa13.79□□□□□ -0.2
RPS3A-201ENST00000274065 INO80Q9ULG1 1556 aaPredicted RBP13.79□□□□□ -0.2
RPS3A-201ENST00000274065 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
RPS3A-201ENST00000274065 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
RPS3A-201ENST00000274065 TNRQ92752 1358 aa13.78□□□□□ -0.2
RPS3A-201ENST00000274065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.78□□□□□ -0.2
RPS3A-201ENST00000274065 KIAA1107Q9UPP5 1409 aa13.78□□□□□ -0.2
RPS3A-201ENST00000274065 ANKLE2Q86XL3 938 aa13.77□□□□□ -0.21
RPS3A-201ENST00000274065 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
RPS3A-201ENST00000274065 GABBR2O75899 941 aa13.76□□□□□ -0.21
RPS3A-201ENST00000274065 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
RPS3A-201ENST00000274065 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
RPS3A-201ENST00000274065 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
RPS3A-201ENST00000274065 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
RPS3A-201ENST00000274065 MED14O60244 1454 aa13.73□□□□□ -0.21
RPS3A-201ENST00000274065 THEMISQ8N1K5 641 aaPredicted RBP13.72□□□□□ -0.21
RPS3A-201ENST00000274065 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
RPS3A-201ENST00000274065 PZPP20742 1482 aa13.72□□□□□ -0.21
RPS3A-201ENST00000274065 ZNF644Q9H582 1327 aaPredicted RBP13.71□□□□□ -0.21
RPS3A-201ENST00000274065 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.22
RPS3A-201ENST00000274065 MIA2Q96PC5 1412 aa13.7□□□□□ -0.22
RPS3A-201ENST00000274065 CCNB3Q8WWL7 1395 aa13.7□□□□□ -0.22
RPS3A-201ENST00000274065 ADGBQ8N7X0 1667 aa13.69□□□□□ -0.22
RPS3A-201ENST00000274065 FYCO1Q9BQS8 1478 aa13.69□□□□□ -0.22
RPS3A-201ENST00000274065 KIF3BO15066 747 aa13.69□□□□□ -0.22
RPS3A-201ENST00000274065 POTEAQ6S8J7 498 aa13.69□□□□□ -0.22
RPS3A-201ENST00000274065 UGGT1Q9NYU2 1555 aa13.69□□□□□ -0.22
RPS3A-201ENST00000274065 STRCP1A6NGW2 1772 aa13.68□□□□□ -0.22
RPS3A-201ENST00000274065 MBD5Q9P267 1494 aa13.68□□□□□ -0.22
RPS3A-201ENST00000274065 FAM135AQ9P2D6 1515 aa13.68□□□□□ -0.22
RPS3A-201ENST00000274065 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
RPS3A-201ENST00000274065 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
RPS3A-201ENST00000274065 KDM5DQ9BY66 1539 aa13.67□□□□□ -0.22
RPS3A-201ENST00000274065 RNF17Q9BXT8 1623 aaKnown RBP13.67□□□□□ -0.22
RPS3A-201ENST00000274065 WASHC2CQ9Y4E1 1318 aa13.66□□□□□ -0.22
RPS3A-201ENST00000274065 RTEL1-TNFRSF6BF6WH68 1400 aa13.66□□□□□ -0.22
RPS3A-201ENST00000274065 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
RPS3A-201ENST00000274065 CLCN6P51797 869 aa13.65□□□□□ -0.22
RPS3A-201ENST00000274065 SYNMO15061 1565 aa13.63□□□□□ -0.23
RPS3A-201ENST00000274065 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
RPS3A-201ENST00000274065 MTUS2Q5JR59 1369 aa13.61□□□□□ -0.23
RPS3A-201ENST00000274065 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms