RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 PLCH2O75038 1416 aa27.76■■■□□ 2.03
RAB5A-201ENST00000273047 EFCAB2Q5VUJ9 269 aa27.76■■■□□ 2.03
RAB5A-201ENST00000273047 AFAP1Q8N556 730 aa27.76■■■□□ 2.03
RAB5A-201ENST00000273047 TRAPPC8Q9Y2L5 1435 aa27.75■■■□□ 2.03
RAB5A-201ENST00000273047 RALGAPBQ86X10 1494 aa27.75■■■□□ 2.03
RAB5A-201ENST00000273047 NEFLP07196 543 aa27.75■■■□□ 2.03
RAB5A-201ENST00000273047 CCDC144AA2RUR9 1427 aa27.74■■■□□ 2.03
RAB5A-201ENST00000273047 PLA2R1Q13018 1463 aa27.74■■■□□ 2.03
RAB5A-201ENST00000273047 SENP3-EIF4A1A0A087X0R7 540 aa27.74■■■□□ 2.03
RAB5A-201ENST00000273047 IRX6P78412 446 aaPredicted RBP27.74■■■□□ 2.03
RAB5A-201ENST00000273047 MAST1Q9Y2H9 1570 aa27.72■■■□□ 2.03
RAB5A-201ENST00000273047 DHX29Q7Z478 1369 aaKnown RBP27.72■■■□□ 2.03
RAB5A-201ENST00000273047 NBPF1Q3BBV0 1214 aa27.72■■■□□ 2.03
RAB5A-201ENST00000273047 ROCK2O75116 1388 aaKnown RBP27.71■■■□□ 2.03
RAB5A-201ENST00000273047 UNC13BO14795 1591 aa27.68■■■□□ 2.02
RAB5A-201ENST00000273047 UHRF1BP1LA0JNW5 1464 aa27.67■■■□□ 2.02
RAB5A-201ENST00000273047 PLXNC1O60486 1568 aa27.66■■■□□ 2.02
RAB5A-201ENST00000273047 ABCC1P33527 1531 aa27.64■■■□□ 2.01
RAB5A-201ENST00000273047 DUOX2Q9NRD8 1548 aa27.63■■■□□ 2.01
RAB5A-201ENST00000273047 SPAG9O60271 1321 aaKnown RBP27.62■■■□□ 2.01
RAB5A-201ENST00000273047 PRAG1Q86YV5 1406 aa27.61■■■□□ 2.01
RAB5A-201ENST00000273047 A2MP01023 1474 aa27.6■■■□□ 2.01
RAB5A-201ENST00000273047 IQGAP3Q86VI3 1631 aa27.6■■■□□ 2.01
RAB5A-201ENST00000273047 MYT1LQ9UL68 1186 aa27.6■■■□□ 2.01
RAB5A-201ENST00000273047 ERBINQ96RT1 1412 aa27.56■■■□□ 2
RAB5A-201ENST00000273047 TRPM1Q7Z4N2 1603 aa27.55■■■□□ 2
RAB5A-201ENST00000273047 WDR7Q9Y4E6 1490 aa27.53■■■□□ 2
RAB5A-201ENST00000273047 ARID4BQ4LE39 1312 aaPredicted RBP27.53■■■□□ 2
RAB5A-201ENST00000273047 MAGI2Q86UL8 1455 aa27.5■■□□□ 1.99
RAB5A-201ENST00000273047 BCL11AQ9H165 835 aa27.5■■□□□ 1.99
RAB5A-201ENST00000273047 FANCAO15360 1455 aa27.49■■□□□ 1.99
RAB5A-201ENST00000273047 ZBED9Q6R2W3 1325 aa27.49■■□□□ 1.99
RAB5A-201ENST00000273047 ZFYVE16Q7Z3T8 1539 aa27.47■■□□□ 1.99
RAB5A-201ENST00000273047 SCAPERQ9BY12 1400 aa27.46■■□□□ 1.99
RAB5A-201ENST00000273047 KIF3BO15066 747 aa27.45■■□□□ 1.98
RAB5A-201ENST00000273047 TMC1Q8TDI8 760 aa27.45■■□□□ 1.98
RAB5A-201ENST00000273047 E9PCH4 1651 aa27.44■■□□□ 1.98
RAB5A-201ENST00000273047 ASXL2Q76L83 1435 aa27.43■■□□□ 1.98
RAB5A-201ENST00000273047 DISP3Q9P2K9 1392 aa27.42■■□□□ 1.98
RAB5A-201ENST00000273047 TESK2Q96S53 571 aa27.41■■□□□ 1.98
RAB5A-201ENST00000273047 RBM19Q9Y4C8 960 aaKnown RBP27.41■■□□□ 1.98
RAB5A-201ENST00000273047 PNISRQ8TF01 805 aaKnown RBP27.4■■□□□ 1.98
RAB5A-201ENST00000273047 ATP10AO60312 1499 aa27.39■■□□□ 1.98
RAB5A-201ENST00000273047 ADGRL1O94910 1474 aa27.39■■□□□ 1.98
RAB5A-201ENST00000273047 GPRASP1Q5JY77 1395 aa27.38■■□□□ 1.97
RAB5A-201ENST00000273047 RTEL1-TNFRSF6BF6WH68 1400 aa27.38■■□□□ 1.97
RAB5A-201ENST00000273047 ATP7AQ04656 1500 aa27.37■■□□□ 1.97
RAB5A-201ENST00000273047 ABCA9Q8IUA7 1624 aa27.37■■□□□ 1.97
RAB5A-201ENST00000273047 ARAP3Q8WWN8 1544 aa27.35■■□□□ 1.97
RAB5A-201ENST00000273047 PRDM15P57071 1507 aaPredicted RBP27.34■■□□□ 1.97
RAB5A-201ENST00000273047 CC2D1BQ5T0F9 858 aaKnown RBP27.34■■□□□ 1.97
RAB5A-201ENST00000273047 OSCARQ8IYS5 282 aa27.33■■□□□ 1.97
RAB5A-201ENST00000273047 PER1O15534 1290 aaPredicted RBP27.32■■□□□ 1.96
RAB5A-201ENST00000273047 MYBBP1AQ9BQG0 1328 aaKnown RBP27.32■■□□□ 1.96
RAB5A-201ENST00000273047 SALL2Q9Y467 1007 aaPredicted RBP27.31■■□□□ 1.96
RAB5A-201ENST00000273047 INO80Q9ULG1 1556 aaPredicted RBP27.31■■□□□ 1.96
RAB5A-201ENST00000273047 PANK3Q9H999 370 aa27.3■■□□□ 1.96
RAB5A-201ENST00000273047 CLTCL1P53675 1640 aa27.29■■□□□ 1.96
RAB5A-201ENST00000273047 COL17A1Q9UMD9 1497 aaPredicted RBP27.29■■□□□ 1.96
RAB5A-201ENST00000273047 NPM1P06748 294 aaKnown RBP eCLIP27.28■■□□□ 1.96
RAB5A-201ENST00000273047 UGGT1Q9NYU2 1555 aa27.28■■□□□ 1.96
RAB5A-201ENST00000273047 SPHKAPQ2M3C7 1700 aa27.28■■□□□ 1.96
RAB5A-201ENST00000273047 RALBP1Q15311 655 aa27.27■■□□□ 1.96
RAB5A-201ENST00000273047 EIF2AK4Q9P2K8 1649 aaKnown RBP27.27■■□□□ 1.96
RAB5A-201ENST00000273047 DEPDC5O75140 1603 aa27.26■■□□□ 1.95
RAB5A-201ENST00000273047 TRPM2O94759 1503 aa27.26■■□□□ 1.95
RAB5A-201ENST00000273047 TMF1P82094 1093 aa27.26■■□□□ 1.95
RAB5A-201ENST00000273047 KANK1Q14678 1352 aa27.25■■□□□ 1.95
RAB5A-201ENST00000273047 KTN1Q86UP2 1357 aaKnown RBP27.24■■□□□ 1.95
RAB5A-201ENST00000273047 PTPRTO14522 1441 aa27.23■■□□□ 1.95
RAB5A-201ENST00000273047 MADDQ8WXG6 1647 aa27.23■■□□□ 1.95
RAB5A-201ENST00000273047 B4GALNT3Q6L9W6 998 aa27.23■■□□□ 1.95
RAB5A-201ENST00000273047 LAMC1P11047 1609 aa27.22■■□□□ 1.95
RAB5A-201ENST00000273047 BRD4O60885 1362 aaPredicted RBP27.21■■□□□ 1.95
RAB5A-201ENST00000273047 TET3O43151 1660 aa27.21■■□□□ 1.95
RAB5A-201ENST00000273047 CEP152O94986 1710 aa27.21■■□□□ 1.95
RAB5A-201ENST00000273047 CFAP65Q6ZU64 1925 aaKnown RBP27.2■■□□□ 1.95
RAB5A-201ENST00000273047 PARD3Q8TEW0 1356 aa27.2■■□□□ 1.95
RAB5A-201ENST00000273047 KIDINS220Q9ULH0 1771 aa27.2■■□□□ 1.94
RAB5A-201ENST00000273047 RNF17Q9BXT8 1623 aaKnown RBP27.19■■□□□ 1.94
RAB5A-201ENST00000273047 NUDCQ9Y266 331 aa27.19■■□□□ 1.94
RAB5A-201ENST00000273047 MROH1Q8NDA8 1641 aa27.19■■□□□ 1.94
RAB5A-201ENST00000273047 LRPPRCP42704 1394 aaKnown RBP27.19■■□□□ 1.94
RAB5A-201ENST00000273047 NLRP13Q86W25 1043 aa27.18■■□□□ 1.94
RAB5A-201ENST00000273047 SMG6Q86US8 1419 aaKnown RBP27.18■■□□□ 1.94
RAB5A-201ENST00000273047 GGT6Q6P531 493 aa27.17■■□□□ 1.94
RAB5A-201ENST00000273047 CFAP70Q5T0N1 1121 aa27.17■■□□□ 1.94
RAB5A-201ENST00000273047 VWDEQ8N2E2 1590 aa27.16■■□□□ 1.94
RAB5A-201ENST00000273047 CD109Q6YHK3 1445 aa27.16■■□□□ 1.94
RAB5A-201ENST00000273047 PPP4R2Q9NY27 417 aa27.16■■□□□ 1.94
RAB5A-201ENST00000273047 CHGAP10645 457 aaKnown RBP27.15■■□□□ 1.94
RAB5A-201ENST00000273047 ADGRF5Q8IZF2 1346 aa27.15■■□□□ 1.94
RAB5A-201ENST00000273047 MSH5O43196 834 aa27.13■■□□□ 1.93
RAB5A-201ENST00000273047 RAPGEF3O95398 923 aa27.13■■□□□ 1.93
RAB5A-201ENST00000273047 ZNF518AQ6AHZ1 1483 aa27.11■■□□□ 1.93
RAB5A-201ENST00000273047 IQGAP1P46940 1657 aa27.1■■□□□ 1.93
RAB5A-201ENST00000273047 PPRC1Q5VV67 1664 aaKnown RBP27.08■■□□□ 1.93
RAB5A-201ENST00000273047 SCAF11Q99590 1463 aaKnown RBP27.07■■□□□ 1.92
RAB5A-201ENST00000273047 EFCAB6Q5THR3 1501 aa27.05■■□□□ 1.92
RAB5A-201ENST00000273047 ERICH6BQ5W0A0 696 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms