RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
LAMA3-201ENST00000269217 UACAQ9BZF9 1416 aa12.75□□□□□ -0.37
LAMA3-201ENST00000269217 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
LAMA3-201ENST00000269217 CSPP1Q1MSJ5 1256 aa12.75□□□□□ -0.37
LAMA3-201ENST00000269217 WASHC2CQ9Y4E1 1318 aa12.74□□□□□ -0.37
LAMA3-201ENST00000269217 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
LAMA3-201ENST00000269217 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
LAMA3-201ENST00000269217 USP47Q96K76 1375 aa12.74□□□□□ -0.37
LAMA3-201ENST00000269217 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
LAMA3-201ENST00000269217 E9PSI1 815 aa12.73□□□□□ -0.37
LAMA3-201ENST00000269217 ST18O60284 1047 aa12.73□□□□□ -0.37
LAMA3-201ENST00000269217 JPH4Q96JJ6 628 aa12.73□□□□□ -0.37
LAMA3-201ENST00000269217 SLC4A10Q6U841 1118 aa12.73□□□□□ -0.37
LAMA3-201ENST00000269217 PDE4AP27815 886 aa12.72□□□□□ -0.37
LAMA3-201ENST00000269217 TPM4P67936 248 aa12.72□□□□□ -0.37
LAMA3-201ENST00000269217 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
LAMA3-201ENST00000269217 DDX11L8A8MPP1 907 aa12.71□□□□□ -0.37
LAMA3-201ENST00000269217 TRHP20396 242 aaPredicted RBP12.71□□□□□ -0.37
LAMA3-201ENST00000269217 GORABQ5T7V8 394 aa12.71□□□□□ -0.38
LAMA3-201ENST00000269217 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
LAMA3-201ENST00000269217 EXOC6Q8TAG9 804 aa12.7□□□□□ -0.38
LAMA3-201ENST00000269217 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
LAMA3-201ENST00000269217 PHF14O94880 888 aa12.69□□□□□ -0.38
LAMA3-201ENST00000269217 ZKSCAN2Q63HK3 967 aa12.69□□□□□ -0.38
LAMA3-201ENST00000269217 NGDNQ8NEJ9 315 aaKnown RBP12.69□□□□□ -0.38
LAMA3-201ENST00000269217 CCDC34Q96HJ3 373 aa12.69□□□□□ -0.38
LAMA3-201ENST00000269217 EID1Q9Y6B2 187 aa12.69□□□□□ -0.38
LAMA3-201ENST00000269217 HSP90B1P14625 803 aaKnown RBP12.69□□□□□ -0.38
LAMA3-201ENST00000269217 AMPHP49418 695 aa12.69□□□□□ -0.38
LAMA3-201ENST00000269217 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
LAMA3-201ENST00000269217 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
LAMA3-201ENST00000269217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.68□□□□□ -0.38
LAMA3-201ENST00000269217 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
LAMA3-201ENST00000269217 ISY1Q9ULR0 285 aaKnown RBP12.68□□□□□ -0.38
LAMA3-201ENST00000269217 NGEFQ8N5V2 710 aa12.68□□□□□ -0.38
LAMA3-201ENST00000269217 CRBNQ96SW2 442 aa12.68□□□□□ -0.38
LAMA3-201ENST00000269217 PLIN1O60240 522 aa12.67□□□□□ -0.38
LAMA3-201ENST00000269217 CHMP3Q9Y3E7 222 aa12.67□□□□□ -0.38
LAMA3-201ENST00000269217 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
LAMA3-201ENST00000269217 TAF7LQ5H9L4 462 aa12.67□□□□□ -0.38
LAMA3-201ENST00000269217 KIF16BQ96L93 1317 aa12.67□□□□□ -0.38
LAMA3-201ENST00000269217 FANCIQ9NVI1 1328 aa12.66□□□□□ -0.38
LAMA3-201ENST00000269217 FANCD2Q9BXW9 1451 aa12.66□□□□□ -0.38
LAMA3-201ENST00000269217 NOL8Q76FK4 1167 aaKnown RBP12.66□□□□□ -0.38
LAMA3-201ENST00000269217 KIF3AQ9Y496 699 aa12.66□□□□□ -0.38
LAMA3-201ENST00000269217 VGFO15240 615 aaPredicted RBP12.65□□□□□ -0.38
LAMA3-201ENST00000269217 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
LAMA3-201ENST00000269217 ANKRD45Q5TZF3 282 aa12.64□□□□□ -0.39
LAMA3-201ENST00000269217 MYOM3Q5VTT5 1437 aa12.64□□□□□ -0.39
LAMA3-201ENST00000269217 SKOR2Q2VWA4 1001 aaPredicted RBP12.64□□□□□ -0.39
LAMA3-201ENST00000269217 CUX1P39880 1505 aa12.64□□□□□ -0.39
LAMA3-201ENST00000269217 COG6Q9Y2V7 657 aa12.64□□□□□ -0.39
LAMA3-201ENST00000269217 APAF1O14727 1248 aa12.63□□□□□ -0.39
LAMA3-201ENST00000269217 CLSTN1O94985 981 aa12.63□□□□□ -0.39
LAMA3-201ENST00000269217 FGD6Q6ZV73 1430 aa12.63□□□□□ -0.39
LAMA3-201ENST00000269217 GSE1Q14687 1217 aa12.63□□□□□ -0.39
LAMA3-201ENST00000269217 COG3Q96JB2 828 aa12.63□□□□□ -0.39
LAMA3-201ENST00000269217 PTPRGP23470 1445 aa12.62□□□□□ -0.39
LAMA3-201ENST00000269217 DDX19BQ9UMR2 479 aa12.62□□□□□ -0.39
LAMA3-201ENST00000269217 CCDC7Q96M83 1385 aa12.62□□□□□ -0.39
LAMA3-201ENST00000269217 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
LAMA3-201ENST00000269217 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
LAMA3-201ENST00000269217 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
LAMA3-201ENST00000269217 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
LAMA3-201ENST00000269217 SLC4A3P48751 1232 aa12.6□□□□□ -0.39
LAMA3-201ENST00000269217 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.6□□□□□ -0.39
LAMA3-201ENST00000269217 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
LAMA3-201ENST00000269217 CHMP4CQ96CF2 233 aa12.6□□□□□ -0.39
LAMA3-201ENST00000269217 CNTLNQ9NXG0 1405 aa12.6□□□□□ -0.39
LAMA3-201ENST00000269217 IGF1RP08069 1367 aa12.6□□□□□ -0.39
LAMA3-201ENST00000269217 ARID3AQ99856 593 aa12.59□□□□□ -0.39
LAMA3-201ENST00000269217 FOXD4L5Q5VV16 416 aaPredicted RBP12.59□□□□□ -0.39
LAMA3-201ENST00000269217 FOXD4L4Q8WXT5 416 aaPredicted RBP12.59□□□□□ -0.39
LAMA3-201ENST00000269217 SF3A1Q15459 793 aaKnown RBP12.59□□□□□ -0.39
LAMA3-201ENST00000269217 KIF7Q2M1P5 1343 aa12.58□□□□□ -0.39
LAMA3-201ENST00000269217 STAC3Q96MF2 364 aa12.58□□□□□ -0.39
LAMA3-201ENST00000269217 NUTM2FA1L443 756 aa12.58□□□□□ -0.4
LAMA3-201ENST00000269217 KIF21BO75037 1637 aa12.58□□□□□ -0.4
LAMA3-201ENST00000269217 FGD5Q6ZNL6 1462 aa12.58□□□□□ -0.4
LAMA3-201ENST00000269217 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
LAMA3-201ENST00000269217 DIAPH1O60610 1272 aaKnown RBP12.58□□□□□ -0.4
LAMA3-201ENST00000269217 REC8O95072 547 aa12.58□□□□□ -0.4
LAMA3-201ENST00000269217 API5Q9BZZ5 524 aaKnown RBP12.57□□□□□ -0.4
LAMA3-201ENST00000269217 GAPVD1Q14C86 1478 aa12.57□□□□□ -0.4
LAMA3-201ENST00000269217 LRRC9Q6ZRR7 1453 aa12.57□□□□□ -0.4
LAMA3-201ENST00000269217 MIA2Q96PC5 1412 aa12.57□□□□□ -0.4
LAMA3-201ENST00000269217 H3BQV1 296 aa12.57□□□□□ -0.4
LAMA3-201ENST00000269217 IFFO2Q5TF58 517 aa12.57□□□□□ -0.4
LAMA3-201ENST00000269217 RASSF8Q8NHQ8 419 aa12.57□□□□□ -0.4
LAMA3-201ENST00000269217 ROCK1Q13464 1354 aa12.56□□□□□ -0.4
LAMA3-201ENST00000269217 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
LAMA3-201ENST00000269217 RSPH6AQ9H0K4 717 aa12.56□□□□□ -0.4
LAMA3-201ENST00000269217 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
LAMA3-201ENST00000269217 AAMPQ13685 434 aa12.56□□□□□ -0.4
LAMA3-201ENST00000269217 NOC3LQ8WTT2 800 aaKnown RBP12.56□□□□□ -0.4
LAMA3-201ENST00000269217 TMX4Q9H1E5 349 aaPredicted RBP12.56□□□□□ -0.4
LAMA3-201ENST00000269217 C1orf141Q5JVX7 400 aa12.55□□□□□ -0.4
LAMA3-201ENST00000269217 FAM184AQ8NB25 1140 aa12.55□□□□□ -0.4
LAMA3-201ENST00000269217 RUFY2Q8WXA3 655 aa12.55□□□□□ -0.4
LAMA3-201ENST00000269217 TOMM22Q9NS69 142 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms