RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 MFAP1P55081 439 aaKnown RBP18.69■□□□□ 0.58
PDPK1-201ENST00000268673 HNRNPMP52272 730 aaKnown RBP eCLIP18.69■□□□□ 0.587e-8■■■□□ 17
PDPK1-201ENST00000268673 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.69■□□□□ 0.58
PDPK1-201ENST00000268673 HFM1A2PYH4 1435 aa18.68■□□□□ 0.58
PDPK1-201ENST00000268673 IPO8O15397 1037 aaKnown RBP18.68■□□□□ 0.58
PDPK1-201ENST00000268673 PANK3Q9H999 370 aa18.68■□□□□ 0.58
PDPK1-201ENST00000268673 STK26Q9P289 416 aa18.68■□□□□ 0.58
PDPK1-201ENST00000268673 CCDC184Q52MB2 194 aa18.67■□□□□ 0.58
PDPK1-201ENST00000268673 FYCO1Q9BQS8 1478 aa18.66■□□□□ 0.58
PDPK1-201ENST00000268673 KIF3BO15066 747 aa18.66■□□□□ 0.58
PDPK1-201ENST00000268673 PRKCSHP14314 528 aaPredicted RBP18.66■□□□□ 0.58
PDPK1-201ENST00000268673 BRPF3Q9ULD4 1205 aa18.66■□□□□ 0.58
PDPK1-201ENST00000268673 E9PSI1 815 aa18.65■□□□□ 0.58
PDPK1-201ENST00000268673 SOX12O15370 315 aa18.64■□□□□ 0.57
PDPK1-201ENST00000268673 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.57
PDPK1-201ENST00000268673 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.57
PDPK1-201ENST00000268673 NCOA2Q15596 1464 aa18.63■□□□□ 0.57
PDPK1-201ENST00000268673 VSIG10Q8N0Z9 540 aa18.63■□□□□ 0.57
PDPK1-201ENST00000268673 PNISRQ8TF01 805 aaKnown RBP18.62■□□□□ 0.57
PDPK1-201ENST00000268673 NGEFQ8N5V2 710 aa18.62■□□□□ 0.57
PDPK1-201ENST00000268673 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
PDPK1-201ENST00000268673 CHAF1AQ13111 956 aaPredicted RBP18.61■□□□□ 0.57
PDPK1-201ENST00000268673 ITPRIPQ8IWB1 547 aa18.61■□□□□ 0.57
PDPK1-201ENST00000268673 MIA2Q96PC5 1412 aa18.61■□□□□ 0.57
PDPK1-201ENST00000268673 CFTRP13569 1480 aa18.6■□□□□ 0.57
PDPK1-201ENST00000268673 SKOR2Q2VWA4 1001 aaPredicted RBP18.6■□□□□ 0.57
PDPK1-201ENST00000268673 FAM43AQ8N2R8 423 aa18.6■□□□□ 0.57
PDPK1-201ENST00000268673 EIF3AQ14152 1382 aaKnown RBP18.6■□□□□ 0.57
PDPK1-201ENST00000268673 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
PDPK1-201ENST00000268673 PLCB2Q00722 1185 aa18.59■□□□□ 0.57
PDPK1-201ENST00000268673 SPAG9O60271 1321 aaKnown RBP18.59■□□□□ 0.57
PDPK1-201ENST00000268673 CLUAP1Q96AJ1 413 aa18.59■□□□□ 0.57
PDPK1-201ENST00000268673 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.57
PDPK1-201ENST00000268673 CHMP5Q9NZZ3 219 aa18.58■□□□□ 0.56
PDPK1-201ENST00000268673 CCDC144AA2RUR9 1427 aa18.58■□□□□ 0.56
PDPK1-201ENST00000268673 CALD1Q05682 793 aaKnown RBP18.58■□□□□ 0.56
PDPK1-201ENST00000268673 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
PDPK1-201ENST00000268673 U2AF1L5P0DN76 240 aaPredicted RBP18.57■□□□□ 0.56
PDPK1-201ENST00000268673 U2AF1Q01081 240 aaKnown RBP eCLIP18.57■□□□□ 0.56
PDPK1-201ENST00000268673 MAP3K1Q13233 1512 aa18.56■□□□□ 0.56
PDPK1-201ENST00000268673 SMC4Q9NTJ3 1288 aa18.56■□□□□ 0.56
PDPK1-201ENST00000268673 FRAT2O75474 233 aaPredicted RBP18.56■□□□□ 0.56
PDPK1-201ENST00000268673 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
PDPK1-201ENST00000268673 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
PDPK1-201ENST00000268673 COG6Q9Y2V7 657 aa18.55■□□□□ 0.56
PDPK1-201ENST00000268673 KIAA2012Q0VF49 1180 aa18.55■□□□□ 0.56
PDPK1-201ENST00000268673 MCCP23508 829 aa18.54■□□□□ 0.56
PDPK1-201ENST00000268673 CDCA7LQ96GN5 454 aa18.54■□□□□ 0.56
PDPK1-201ENST00000268673 AAMPQ13685 434 aa18.53■□□□□ 0.56
PDPK1-201ENST00000268673 APAF1O14727 1248 aa18.52■□□□□ 0.56
PDPK1-201ENST00000268673 SYAP1Q96A49 352 aaPredicted RBP18.52■□□□□ 0.56
PDPK1-201ENST00000268673 EFCAB5A4FU69 1503 aa18.52■□□□□ 0.56
PDPK1-201ENST00000268673 TPRNQ4KMQ1 711 aa18.52■□□□□ 0.56
PDPK1-201ENST00000268673 WASHC2CQ9Y4E1 1318 aa18.51■□□□□ 0.55
PDPK1-201ENST00000268673 NAIPQ13075 1403 aa18.5■□□□□ 0.55
PDPK1-201ENST00000268673 MRE11P49959 708 aa18.5■□□□□ 0.55
PDPK1-201ENST00000268673 MAPKBP1O60336 1514 aa18.48■□□□□ 0.55
PDPK1-201ENST00000268673 DDX49Q9Y6V7 483 aaKnown RBP18.48■□□□□ 0.55
PDPK1-201ENST00000268673 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
PDPK1-201ENST00000268673 ZRSR1Q15695 479 aaKnown RBP18.47■□□□□ 0.55
PDPK1-201ENST00000268673 PTPRGP23470 1445 aa18.47■□□□□ 0.55
PDPK1-201ENST00000268673 CDK11BP21127 795 aaKnown RBP18.46■□□□□ 0.55
PDPK1-201ENST00000268673 OS9Q13438 667 aaPredicted RBP18.46■□□□□ 0.55
PDPK1-201ENST00000268673 FOXD4L1Q9NU39 408 aa18.45■□□□□ 0.54
PDPK1-201ENST00000268673 RTF1Q92541 710 aaKnown RBP18.45■□□□□ 0.54
PDPK1-201ENST00000268673 ADAMTS8Q9UP79 889 aa18.45■□□□□ 0.54
PDPK1-201ENST00000268673 NUTM2DQ5VT03 806 aaPredicted RBP18.44■□□□□ 0.54
PDPK1-201ENST00000268673 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
PDPK1-201ENST00000268673 GOLGA6L6A8MZA4 724 aa18.43■□□□□ 0.54
PDPK1-201ENST00000268673 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
PDPK1-201ENST00000268673 NCOA1Q15788 1441 aa18.43■□□□□ 0.54
PDPK1-201ENST00000268673 C11orf95C9JLR9 678 aaPredicted RBP18.43■□□□□ 0.54
PDPK1-201ENST00000268673 ZNF644Q9H582 1327 aaPredicted RBP18.43■□□□□ 0.54
PDPK1-201ENST00000268673 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
PDPK1-201ENST00000268673 ARID3AQ99856 593 aa18.42■□□□□ 0.54
PDPK1-201ENST00000268673 GOLGA6L4A6NEF3 574 aa18.42■□□□□ 0.54
PDPK1-201ENST00000268673 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
PDPK1-201ENST00000268673 ST18O60284 1047 aa18.41■□□□□ 0.54
PDPK1-201ENST00000268673 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.4■□□□□ 0.54
PDPK1-201ENST00000268673 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
PDPK1-201ENST00000268673 ANKRD50Q9ULJ7 1429 aa18.4■□□□□ 0.54
PDPK1-201ENST00000268673 NRDCO43847 1150 aa18.4■□□□□ 0.54
PDPK1-201ENST00000268673 TRAK2O60296 914 aa18.4■□□□□ 0.54
PDPK1-201ENST00000268673 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
PDPK1-201ENST00000268673 DDX19BQ9UMR2 479 aa18.4■□□□□ 0.54
PDPK1-201ENST00000268673 PDE3AQ14432 1141 aa18.39■□□□□ 0.53
PDPK1-201ENST00000268673 PHF14O94880 888 aa18.38■□□□□ 0.53
PDPK1-201ENST00000268673 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
PDPK1-201ENST00000268673 ISY1Q9ULR0 285 aaKnown RBP18.38■□□□□ 0.53
PDPK1-201ENST00000268673 KIAA1107Q9UPP5 1409 aa18.38■□□□□ 0.53
PDPK1-201ENST00000268673 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
PDPK1-201ENST00000268673 DZIP1LQ8IYY4 767 aaKnown RBP18.37■□□□□ 0.53
PDPK1-201ENST00000268673 NPHP1O15259 732 aa18.37■□□□□ 0.53
PDPK1-201ENST00000268673 DRC7Q8IY82 874 aa18.36■□□□□ 0.53
PDPK1-201ENST00000268673 PANK1Q8TE04 598 aa18.36■□□□□ 0.53
PDPK1-201ENST00000268673 CYB5RLQ6IPT4 315 aa18.36■□□□□ 0.53
PDPK1-201ENST00000268673 EID1Q9Y6B2 187 aa18.36■□□□□ 0.53
PDPK1-201ENST00000268673 KCNJ4P48050 445 aa18.35■□□□□ 0.53
PDPK1-201ENST00000268673 APBB1O00213 710 aa18.35■□□□□ 0.53
PDPK1-201ENST00000268673 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.531e-6■■■■■ 29.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms