RNA–Protein interactions for RNA: ENST00000267406.10

CBLN3-201, Transcript of cerebellin 3 precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBLN3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-201ENST00000267406 PLCH2O75038 1416 aa29.52■■■□□ 2.32
CBLN3-201ENST00000267406 FAM9BQ8IZU0 186 aa29.51■■■□□ 2.31
CBLN3-201ENST00000267406 DHX29Q7Z478 1369 aaKnown RBP29.5■■■□□ 2.31
CBLN3-201ENST00000267406 IQGAP3Q86VI3 1631 aa29.49■■■□□ 2.31
CBLN3-201ENST00000267406 CCDC144AA2RUR9 1427 aa29.48■■■□□ 2.31
CBLN3-201ENST00000267406 DUOX2Q9NRD8 1548 aa29.47■■■□□ 2.31
CBLN3-201ENST00000267406 ARID4BQ4LE39 1312 aaPredicted RBP29.46■■■□□ 2.31
CBLN3-201ENST00000267406 PLA2R1Q13018 1463 aa29.46■■■□□ 2.31
CBLN3-201ENST00000267406 EFCAB2Q5VUJ9 269 aa29.45■■■□□ 2.3
CBLN3-201ENST00000267406 ABCC1P33527 1531 aa29.44■■■□□ 2.3
CBLN3-201ENST00000267406 CNGB1Q14028 1251 aaPredicted RBP29.44■■■□□ 2.3
CBLN3-201ENST00000267406 ST20-MTHFSA0A0A6YYL1 179 aa29.42■■■□□ 2.3
CBLN3-201ENST00000267406 TSHZ2Q9NRE2 1034 aa29.42■■■□□ 2.3
CBLN3-201ENST00000267406 TRPM1Q7Z4N2 1603 aa29.41■■■□□ 2.3
CBLN3-201ENST00000267406 ROCK2O75116 1388 aaKnown RBP29.4■■■□□ 2.3
CBLN3-201ENST00000267406 TRAPPC8Q9Y2L5 1435 aa29.4■■■□□ 2.3
CBLN3-201ENST00000267406 RGL3Q3MIN7 710 aa29.4■■■□□ 2.3
CBLN3-201ENST00000267406 ERBINQ96RT1 1412 aa29.4■■■□□ 2.3
CBLN3-201ENST00000267406 PRAG1Q86YV5 1406 aa29.39■■■□□ 2.29
CBLN3-201ENST00000267406 MAGI2Q86UL8 1455 aa29.38■■■□□ 2.29
CBLN3-201ENST00000267406 A2MP01023 1474 aa29.35■■■□□ 2.29
CBLN3-201ENST00000267406 ZBED9Q6R2W3 1325 aa29.31■■■□□ 2.28
CBLN3-201ENST00000267406 NBPF1Q3BBV0 1214 aa29.29■■■□□ 2.28
CBLN3-201ENST00000267406 IRX6P78412 446 aaPredicted RBP29.28■■■□□ 2.28
CBLN3-201ENST00000267406 E9PCH4 1651 aa29.28■■■□□ 2.28
CBLN3-201ENST00000267406 ATP10AO60312 1499 aa29.28■■■□□ 2.28
CBLN3-201ENST00000267406 AFAP1Q8N556 730 aa29.27■■■□□ 2.28
CBLN3-201ENST00000267406 SPAG9O60271 1321 aaKnown RBP29.27■■■□□ 2.28
CBLN3-201ENST00000267406 ARAP3Q8WWN8 1544 aa29.27■■■□□ 2.28
CBLN3-201ENST00000267406 WDR7Q9Y4E6 1490 aa29.25■■■□□ 2.27
CBLN3-201ENST00000267406 ZFYVE16Q7Z3T8 1539 aa29.25■■■□□ 2.27
CBLN3-201ENST00000267406 GPRASP1Q5JY77 1395 aa29.22■■■□□ 2.27
CBLN3-201ENST00000267406 LAMC1P11047 1609 aa29.22■■■□□ 2.27
CBLN3-201ENST00000267406 RTEL1-TNFRSF6BF6WH68 1400 aa29.21■■■□□ 2.27
CBLN3-201ENST00000267406 EIF2AK4Q9P2K8 1649 aaKnown RBP29.2■■■□□ 2.26
CBLN3-201ENST00000267406 PRDM15P57071 1507 aaPredicted RBP29.2■■■□□ 2.26
CBLN3-201ENST00000267406 ABCA9Q8IUA7 1624 aa29.19■■■□□ 2.26
CBLN3-201ENST00000267406 FANCAO15360 1455 aa29.17■■■□□ 2.26
CBLN3-201ENST00000267406 TMC1Q8TDI8 760 aa29.14■■■□□ 2.25
CBLN3-201ENST00000267406 PNISRQ8TF01 805 aaKnown RBP29.13■■■□□ 2.25
CBLN3-201ENST00000267406 DEPDC5O75140 1603 aa29.13■■■□□ 2.25
CBLN3-201ENST00000267406 ATP7AQ04656 1500 aa29.13■■■□□ 2.25
CBLN3-201ENST00000267406 INO80Q9ULG1 1556 aaPredicted RBP29.13■■■□□ 2.25
CBLN3-201ENST00000267406 SPHKAPQ2M3C7 1700 aa29.11■■■□□ 2.25
CBLN3-201ENST00000267406 COL17A1Q9UMD9 1497 aaPredicted RBP29.1■■■□□ 2.25
CBLN3-201ENST00000267406 RNF17Q9BXT8 1623 aaKnown RBP29.1■■■□□ 2.25
CBLN3-201ENST00000267406 TRPM2O94759 1503 aa29.09■■■□□ 2.25
CBLN3-201ENST00000267406 RALBP1Q15311 655 aa29.09■■■□□ 2.25
CBLN3-201ENST00000267406 TESK2Q96S53 571 aa29.09■■■□□ 2.25
CBLN3-201ENST00000267406 MYBBP1AQ9BQG0 1328 aaKnown RBP29.09■■■□□ 2.25
CBLN3-201ENST00000267406 DISP3Q9P2K9 1392 aa29.08■■■□□ 2.25
CBLN3-201ENST00000267406 CEP152O94986 1710 aa29.08■■■□□ 2.25
CBLN3-201ENST00000267406 KTN1Q86UP2 1357 aaKnown RBP29.08■■■□□ 2.25
CBLN3-201ENST00000267406 ASXL2Q76L83 1435 aa29.07■■■□□ 2.24
CBLN3-201ENST00000267406 ADGRL1O94910 1474 aa29.07■■■□□ 2.24
CBLN3-201ENST00000267406 TET3O43151 1660 aa29.06■■■□□ 2.24
CBLN3-201ENST00000267406 SCAPERQ9BY12 1400 aa29.06■■■□□ 2.24
CBLN3-201ENST00000267406 SENP3-EIF4A1A0A087X0R7 540 aa29.05■■■□□ 2.24
CBLN3-201ENST00000267406 MYT1LQ9UL68 1186 aa29.05■■■□□ 2.24
CBLN3-201ENST00000267406 CLTCL1P53675 1640 aa29.05■■■□□ 2.24
CBLN3-201ENST00000267406 MADDQ8WXG6 1647 aa29.05■■■□□ 2.24
CBLN3-201ENST00000267406 BRD4O60885 1362 aaPredicted RBP29.05■■■□□ 2.24
CBLN3-201ENST00000267406 SMG6Q86US8 1419 aaKnown RBP29.04■■■□□ 2.24
CBLN3-201ENST00000267406 ERICH6BQ5W0A0 696 aa29.04■■■□□ 2.24
CBLN3-201ENST00000267406 PTPRTO14522 1441 aa29.03■■■□□ 2.24
CBLN3-201ENST00000267406 VWDEQ8N2E2 1590 aa29.01■■■□□ 2.23
CBLN3-201ENST00000267406 LRPPRCP42704 1394 aaKnown RBP29.01■■■□□ 2.23
CBLN3-201ENST00000267406 KIF3BO15066 747 aa29■■■□□ 2.23
CBLN3-201ENST00000267406 PER1O15534 1290 aaPredicted RBP29■■■□□ 2.23
CBLN3-201ENST00000267406 KANK1Q14678 1352 aa28.99■■■□□ 2.23
CBLN3-201ENST00000267406 PARD3Q8TEW0 1356 aa28.99■■■□□ 2.23
CBLN3-201ENST00000267406 PPP4R2Q9NY27 417 aa28.98■■■□□ 2.23
CBLN3-201ENST00000267406 TMF1P82094 1093 aa28.97■■■□□ 2.23
CBLN3-201ENST00000267406 NUDCQ9Y266 331 aa28.97■■■□□ 2.23
CBLN3-201ENST00000267406 IQGAP1P46940 1657 aa28.97■■■□□ 2.23
CBLN3-201ENST00000267406 MROH1Q8NDA8 1641 aa28.96■■■□□ 2.23
CBLN3-201ENST00000267406 PANK3Q9H999 370 aa28.93■■■□□ 2.22
CBLN3-201ENST00000267406 KIDINS220Q9ULH0 1771 aa28.93■■■□□ 2.22
CBLN3-201ENST00000267406 NLRP13Q86W25 1043 aa28.92■■■□□ 2.22
CBLN3-201ENST00000267406 RBM19Q9Y4C8 960 aaKnown RBP28.91■■■□□ 2.22
CBLN3-201ENST00000267406 CC2D1BQ5T0F9 858 aaKnown RBP28.9■■■□□ 2.22
CBLN3-201ENST00000267406 UGGT1Q9NYU2 1555 aa28.87■■■□□ 2.21
CBLN3-201ENST00000267406 NPM1P06748 294 aaKnown RBP eCLIP28.86■■■□□ 2.21
CBLN3-201ENST00000267406 OSCARQ8IYS5 282 aa28.86■■■□□ 2.21
CBLN3-201ENST00000267406 WASHC2CQ9Y4E1 1318 aa28.86■■■□□ 2.21
CBLN3-201ENST00000267406 B4GALNT3Q6L9W6 998 aa28.85■■■□□ 2.21
CBLN3-201ENST00000267406 STAC3Q96MF2 364 aa28.85■■■□□ 2.21
CBLN3-201ENST00000267406 SCAF11Q99590 1463 aaKnown RBP28.84■■■□□ 2.21
CBLN3-201ENST00000267406 ZNF518AQ6AHZ1 1483 aa28.83■■■□□ 2.21
CBLN3-201ENST00000267406 EFCAB6Q5THR3 1501 aa28.83■■■□□ 2.2
CBLN3-201ENST00000267406 PPRC1Q5VV67 1664 aaKnown RBP28.82■■■□□ 2.2
CBLN3-201ENST00000267406 KIF1BO60333 1816 aa28.81■■■□□ 2.2
CBLN3-201ENST00000267406 RNF123Q5XPI4 1314 aa28.81■■■□□ 2.2
CBLN3-201ENST00000267406 NEURL4Q96JN8 1562 aa28.8■■■□□ 2.2
CBLN3-201ENST00000267406 KIAA1210Q9ULL0 1709 aa28.8■■■□□ 2.2
CBLN3-201ENST00000267406 CD109Q6YHK3 1445 aa28.78■■■□□ 2.2
CBLN3-201ENST00000267406 MAP3K4Q9Y6R4 1608 aa28.77■■■□□ 2.2
CBLN3-201ENST00000267406 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
CBLN3-201ENST00000267406 SALL2Q9Y467 1007 aaPredicted RBP28.76■■■□□ 2.2
CBLN3-201ENST00000267406 CFAP74Q9C0B2 1584 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms