RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 MCTP1Q6DN14 999 aa13.75□□□□□ -0.21
CHFR-201ENST00000266880 BBXQ8WY36 941 aaPredicted RBP13.75□□□□□ -0.21
CHFR-201ENST00000266880 NEFHP12036 1026 aa13.75□□□□□ -0.21
CHFR-201ENST00000266880 ZMYND15Q9H091 742 aa13.75□□□□□ -0.21
CHFR-201ENST00000266880 ZNF330Q9Y3S2 320 aaPredicted RBP13.75□□□□□ -0.21
CHFR-201ENST00000266880 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
CHFR-201ENST00000266880 SKOR2Q2VWA4 1001 aaPredicted RBP13.74□□□□□ -0.21
CHFR-201ENST00000266880 TOMM22Q9NS69 142 aa13.73□□□□□ -0.21
CHFR-201ENST00000266880 IFT57Q9NWB7 429 aa13.73□□□□□ -0.21
CHFR-201ENST00000266880 R3HCC1Q9Y3T6 440 aaKnown RBP13.73□□□□□ -0.21
CHFR-201ENST00000266880 MNS1Q8NEH6 495 aa13.73□□□□□ -0.21
CHFR-201ENST00000266880 ARGLU1Q9NWB6 273 aaPredicted RBP13.73□□□□□ -0.21
CHFR-201ENST00000266880 HMMRO75330 724 aa13.72□□□□□ -0.21
CHFR-201ENST00000266880 ABCC9O60706 1549 aa13.72□□□□□ -0.21
CHFR-201ENST00000266880 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
CHFR-201ENST00000266880 ACBD3Q9H3P7 528 aa13.72□□□□□ -0.21
CHFR-201ENST00000266880 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
CHFR-201ENST00000266880 TMF1P82094 1093 aa13.71□□□□□ -0.21
CHFR-201ENST00000266880 DHX37Q8IY37 1157 aaKnown RBP13.71□□□□□ -0.21
CHFR-201ENST00000266880 NAP1L1P55209 391 aaKnown RBP13.71□□□□□ -0.22
CHFR-201ENST00000266880 TSPYL1Q9H0U9 437 aa13.71□□□□□ -0.22
CHFR-201ENST00000266880 RRP9O43818 475 aaKnown RBP13.7□□□□□ -0.22
CHFR-201ENST00000266880 HSP90B2PQ58FF3 399 aa13.7□□□□□ -0.22
CHFR-201ENST00000266880 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
CHFR-201ENST00000266880 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
CHFR-201ENST00000266880 CCDC66A2RUB6 948 aa13.7□□□□□ -0.22
CHFR-201ENST00000266880 IPO7O95373 1038 aaKnown RBP13.69□□□□□ -0.22
CHFR-201ENST00000266880 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
CHFR-201ENST00000266880 CEP162Q5TB80 1403 aa13.69□□□□□ -0.22
CHFR-201ENST00000266880 SMC4Q9NTJ3 1288 aa13.69□□□□□ -0.22
CHFR-201ENST00000266880 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
CHFR-201ENST00000266880 CDR1P51861 262 aa13.68□□□□□ -0.22
CHFR-201ENST00000266880 KIF3AQ9Y496 699 aa13.68□□□□□ -0.22
CHFR-201ENST00000266880 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
CHFR-201ENST00000266880 SRPK2P78362 688 aaKnown RBP13.68□□□□□ -0.22
CHFR-201ENST00000266880 CAGE1Q8TC20 777 aa13.67□□□□□ -0.22
CHFR-201ENST00000266880 SKIDA1Q1XH10 827 aa13.67□□□□□ -0.22
CHFR-201ENST00000266880 FAM184AQ8NB25 1140 aa13.67□□□□□ -0.22
CHFR-201ENST00000266880 FOSBP53539 338 aa13.67□□□□□ -0.22
CHFR-201ENST00000266880 CLUAP1Q96AJ1 413 aa13.66□□□□□ -0.22
CHFR-201ENST00000266880 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
CHFR-201ENST00000266880 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHFR-201ENST00000266880 IRX3P78415 501 aaPredicted RBP13.66□□□□□ -0.22
CHFR-201ENST00000266880 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
CHFR-201ENST00000266880 CCDC146Q8IYE0 955 aa13.65□□□□□ -0.22
CHFR-201ENST00000266880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.65□□□□□ -0.224e-7■■■■■ 115.9
CHFR-201ENST00000266880 SLC4A10Q6U841 1118 aa13.65□□□□□ -0.22
CHFR-201ENST00000266880 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
CHFR-201ENST00000266880 ATP6V1DQ9Y5K8 247 aa13.65□□□□□ -0.22
CHFR-201ENST00000266880 TAF3Q5VWG9 929 aa13.65□□□□□ -0.22
CHFR-201ENST00000266880 TTLL5Q6EMB2 1281 aa13.65□□□□□ -0.22
CHFR-201ENST00000266880 HSPA5P11021 654 aaKnown RBP13.65□□□□□ -0.22
CHFR-201ENST00000266880 PDE4AP27815 886 aa13.64□□□□□ -0.23
CHFR-201ENST00000266880 BRD2P25440 801 aaKnown RBP13.64□□□□□ -0.23
CHFR-201ENST00000266880 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
CHFR-201ENST00000266880 RILPL2Q969X0 211 aa13.64□□□□□ -0.23
CHFR-201ENST00000266880 STK31Q9BXU1 1019 aa13.63□□□□□ -0.23
CHFR-201ENST00000266880 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
CHFR-201ENST00000266880 DCAF11Q8TEB1 546 aa13.63□□□□□ -0.23
CHFR-201ENST00000266880 NASPP49321 788 aaPredicted RBP13.63□□□□□ -0.23
CHFR-201ENST00000266880 AKAP17AQ02040 695 aaKnown RBP13.63□□□□□ -0.23
CHFR-201ENST00000266880 FAM161AQ3B820 660 aa13.62□□□□□ -0.23
CHFR-201ENST00000266880 LEKR1Q6ZMV7 388 aa13.62□□□□□ -0.23
CHFR-201ENST00000266880 CENPJQ9HC77 1338 aaPredicted RBP13.62□□□□□ -0.23
CHFR-201ENST00000266880 MTERF4Q7Z6M4 381 aaKnown RBP13.62□□□□□ -0.23
CHFR-201ENST00000266880 BICD2Q8TD16 824 aa13.62□□□□□ -0.23
CHFR-201ENST00000266880 PDILTQ8N807 584 aa13.61□□□□□ -0.23
CHFR-201ENST00000266880 AXDND1Q5T1B0 1012 aaPredicted RBP13.61□□□□□ -0.23
CHFR-201ENST00000266880 E9PSI1 815 aa13.6□□□□□ -0.23
CHFR-201ENST00000266880 CHMP4AQ9BY43 222 aa13.6□□□□□ -0.23
CHFR-201ENST00000266880 TCEAL9Q9UHQ7 104 aa13.6□□□□□ -0.23
CHFR-201ENST00000266880 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
CHFR-201ENST00000266880 DIAPH3Q9NSV4 1193 aa13.59□□□□□ -0.23
CHFR-201ENST00000266880 CT47A1Q5JQC4 288 aaPredicted RBP13.59□□□□□ -0.23
CHFR-201ENST00000266880 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
CHFR-201ENST00000266880 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
CHFR-201ENST00000266880 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
CHFR-201ENST00000266880 ERICH4A6NGS2 130 aa13.58□□□□□ -0.24
CHFR-201ENST00000266880 KIAA0754O94854 1291 aa13.58□□□□□ -0.24
CHFR-201ENST00000266880 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
CHFR-201ENST00000266880 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
CHFR-201ENST00000266880 HOOK1Q9UJC3 728 aaKnown RBP13.57□□□□□ -0.24
CHFR-201ENST00000266880 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
CHFR-201ENST00000266880 ANKRD45Q5TZF3 282 aa13.56□□□□□ -0.24
CHFR-201ENST00000266880 SASS6Q6UVJ0 657 aa13.56□□□□□ -0.24
CHFR-201ENST00000266880 RALBP1Q15311 655 aa13.56□□□□□ -0.24
CHFR-201ENST00000266880 CENPQQ7L2Z9 268 aaPredicted RBP13.56□□□□□ -0.24
CHFR-201ENST00000266880 PLIN1O60240 522 aa13.55□□□□□ -0.24
CHFR-201ENST00000266880 DYDC1Q8WWB3 177 aa13.55□□□□□ -0.24
CHFR-201ENST00000266880 STK26Q9P289 416 aa13.55□□□□□ -0.24
CHFR-201ENST00000266880 SPAG9O60271 1321 aaKnown RBP13.55□□□□□ -0.24
CHFR-201ENST00000266880 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
CHFR-201ENST00000266880 ZRSR2Q15696 482 aaKnown RBP13.55□□□□□ -0.24
CHFR-201ENST00000266880 ERCC4Q92889 916 aaPredicted RBP13.55□□□□□ -0.24
CHFR-201ENST00000266880 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
CHFR-201ENST00000266880 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
CHFR-201ENST00000266880 RNF214Q8ND24 703 aa13.54□□□□□ -0.24
CHFR-201ENST00000266880 CENPHQ9H3R5 247 aa13.54□□□□□ -0.24
CHFR-201ENST00000266880 CT47B1P0C2W7 299 aaPredicted RBP13.54□□□□□ -0.24
CHFR-201ENST00000266880 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms