RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 ZBTB22O15209 634 aa16.36■□□□□ 0.21
SYCP3-201ENST00000266743 PREX2Q70Z35 1606 aa16.34■□□□□ 0.21
SYCP3-201ENST00000266743 CLTCQ00610 1675 aaKnown RBP16.34■□□□□ 0.21
SYCP3-201ENST00000266743 CAPN15O75808 1086 aa16.34■□□□□ 0.21
SYCP3-201ENST00000266743 MROH2AA6NES4 1674 aa16.34■□□□□ 0.21
SYCP3-201ENST00000266743 SUPT6HQ7KZ85 1726 aaKnown RBP16.33■□□□□ 0.21
SYCP3-201ENST00000266743 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.2
SYCP3-201ENST00000266743 LRRIQ1Q96JM4 1722 aa16.32■□□□□ 0.2
SYCP3-201ENST00000266743 SHANK2Q9UPX8 1470 aa16.32■□□□□ 0.2
SYCP3-201ENST00000266743 ZNF142P52746 1687 aaPredicted RBP16.31■□□□□ 0.2
SYCP3-201ENST00000266743 SYCP2Q9BX26 1530 aa16.31■□□□□ 0.2
SYCP3-201ENST00000266743 RGS17Q9UGC6 210 aaPredicted RBP16.31■□□□□ 0.2
SYCP3-201ENST00000266743 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
SYCP3-201ENST00000266743 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
SYCP3-201ENST00000266743 A2MP01023 1474 aa16.29■□□□□ 0.2
SYCP3-201ENST00000266743 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
SYCP3-201ENST00000266743 CPS1P31327 1500 aa16.28■□□□□ 0.2
SYCP3-201ENST00000266743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.27■□□□□ 0.2
SYCP3-201ENST00000266743 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.2
SYCP3-201ENST00000266743 NEURL4Q96JN8 1562 aa16.27■□□□□ 0.2
SYCP3-201ENST00000266743 ATP7AQ04656 1500 aa16.26■□□□□ 0.19
SYCP3-201ENST00000266743 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
SYCP3-201ENST00000266743 GPATCH8Q9UKJ3 1502 aaKnown RBP16.25■□□□□ 0.19
SYCP3-201ENST00000266743 CDC42BPAQ5VT25 1732 aa16.25■□□□□ 0.19
SYCP3-201ENST00000266743 TNRQ92752 1358 aa16.25■□□□□ 0.19
SYCP3-201ENST00000266743 ANKLE2Q86XL3 938 aa16.24■□□□□ 0.19
SYCP3-201ENST00000266743 ZNF644Q9H582 1327 aaPredicted RBP16.23■□□□□ 0.19
SYCP3-201ENST00000266743 VWDEQ8N2E2 1590 aa16.23■□□□□ 0.19
SYCP3-201ENST00000266743 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
SYCP3-201ENST00000266743 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
SYCP3-201ENST00000266743 NPHP4O75161 1426 aaPredicted RBP16.2■□□□□ 0.18
SYCP3-201ENST00000266743 POTEAQ6S8J7 498 aa16.2■□□□□ 0.18
SYCP3-201ENST00000266743 CCDC18Q5T9S5 1454 aa16.2■□□□□ 0.18
SYCP3-201ENST00000266743 INO80Q9ULG1 1556 aaPredicted RBP16.2■□□□□ 0.18
SYCP3-201ENST00000266743 KIAA1107Q9UPP5 1409 aa16.19■□□□□ 0.18
SYCP3-201ENST00000266743 KIF3BO15066 747 aa16.18■□□□□ 0.18
SYCP3-201ENST00000266743 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
SYCP3-201ENST00000266743 THEMISQ8N1K5 641 aaPredicted RBP16.17■□□□□ 0.18
SYCP3-201ENST00000266743 LRRC7Q96NW7 1537 aa16.17■□□□□ 0.18
SYCP3-201ENST00000266743 CCNB3Q8WWL7 1395 aa16.15■□□□□ 0.18
SYCP3-201ENST00000266743 POLR1AO95602 1720 aaPredicted RBP16.15■□□□□ 0.18
SYCP3-201ENST00000266743 MIA2Q96PC5 1412 aa16.14■□□□□ 0.17
SYCP3-201ENST00000266743 WASHC2CQ9Y4E1 1318 aa16.14■□□□□ 0.17
SYCP3-201ENST00000266743 DHX29Q7Z478 1369 aaKnown RBP16.13■□□□□ 0.17
SYCP3-201ENST00000266743 PZPP20742 1482 aa16.13■□□□□ 0.17
SYCP3-201ENST00000266743 PLEKHH2Q8IVE3 1493 aa16.13■□□□□ 0.17
SYCP3-201ENST00000266743 MED14O60244 1454 aa16.12■□□□□ 0.17
SYCP3-201ENST00000266743 STRCP1A6NGW2 1772 aa16.11■□□□□ 0.17
SYCP3-201ENST00000266743 UGGT1Q9NYU2 1555 aa16.11■□□□□ 0.17
SYCP3-201ENST00000266743 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
SYCP3-201ENST00000266743 FAM135AQ9P2D6 1515 aa16.1■□□□□ 0.17
SYCP3-201ENST00000266743 FYCO1Q9BQS8 1478 aa16.08■□□□□ 0.16
SYCP3-201ENST00000266743 KDM5DQ9BY66 1539 aa16.08■□□□□ 0.16
SYCP3-201ENST00000266743 ADGBQ8N7X0 1667 aa16.08■□□□□ 0.16
SYCP3-201ENST00000266743 NLRP1Q9C000 1473 aa16.07■□□□□ 0.16
SYCP3-201ENST00000266743 RNF17Q9BXT8 1623 aaKnown RBP16.06■□□□□ 0.16
SYCP3-201ENST00000266743 IQGAP1P46940 1657 aa16.05■□□□□ 0.16
SYCP3-201ENST00000266743 DEPDC5O75140 1603 aa16.05■□□□□ 0.16
SYCP3-201ENST00000266743 MTUS2Q5JR59 1369 aa16.05■□□□□ 0.16
SYCP3-201ENST00000266743 RTEL1-TNFRSF6BF6WH68 1400 aa16.04■□□□□ 0.16
SYCP3-201ENST00000266743 ATXN8OSP0DMR3 200 aa16.04■□□□□ 0.16
SYCP3-201ENST00000266743 LTKP29376 864 aa16.04■□□□□ 0.16
SYCP3-201ENST00000266743 RBM33Q96EV2 1170 aaKnown RBP16.04■□□□□ 0.16
SYCP3-201ENST00000266743 DSG3P32926 999 aa16.03■□□□□ 0.16
SYCP3-201ENST00000266743 TIAM1Q13009 1591 aa16■□□□□ 0.15
SYCP3-201ENST00000266743 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
SYCP3-201ENST00000266743 SYNMO15061 1565 aa16■□□□□ 0.15
SYCP3-201ENST00000266743 SETD1AO15047 1707 aaKnown RBP15.99■□□□□ 0.15
SYCP3-201ENST00000266743 FAM135BQ49AJ0 1406 aa15.99■□□□□ 0.15
SYCP3-201ENST00000266743 SCAF11Q99590 1463 aaKnown RBP15.97■□□□□ 0.15
SYCP3-201ENST00000266743 TMEM94Q12767 1356 aa15.96■□□□□ 0.15
SYCP3-201ENST00000266743 ERVK-7P63135 1459 aa15.96■□□□□ 0.14
SYCP3-201ENST00000266743 NCOA2Q15596 1464 aa15.96■□□□□ 0.14
SYCP3-201ENST00000266743 CCDC141Q6ZP82 1450 aa15.96■□□□□ 0.14
SYCP3-201ENST00000266743 ZC3H13Q5T200 1668 aaKnown RBP15.95■□□□□ 0.14
SYCP3-201ENST00000266743 ABCB7O75027 752 aa15.95■□□□□ 0.14
SYCP3-201ENST00000266743 ATF5Q9Y2D1 282 aaPredicted RBP15.95■□□□□ 0.14
SYCP3-201ENST00000266743 ABCC3O15438 1527 aa15.94■□□□□ 0.14
SYCP3-201ENST00000266743 UPF1Q92900 1129 aaKnown RBP eCLIP15.94■□□□□ 0.14
SYCP3-201ENST00000266743 TRIM52Q96A61 297 aa15.94■□□□□ 0.14
SYCP3-201ENST00000266743 CAMSAP2Q08AD1 1489 aa15.92■□□□□ 0.14
SYCP3-201ENST00000266743 XIRP1Q702N8 1843 aaKnown RBP15.91■□□□□ 0.14
SYCP3-201ENST00000266743 PROSER2Q86WR7 435 aaPredicted RBP15.91■□□□□ 0.14
SYCP3-201ENST00000266743 SLC26A8Q96RN1 970 aa15.91■□□□□ 0.14
SYCP3-201ENST00000266743 TSPY4P0CV99 314 aa15.9■□□□□ 0.14
SYCP3-201ENST00000266743 TSPY10P0CW01 314 aa15.9■□□□□ 0.14
SYCP3-201ENST00000266743 EID1Q9Y6B2 187 aa15.9■□□□□ 0.14
SYCP3-201ENST00000266743 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
SYCP3-201ENST00000266743 ARHGAP23Q9P227 1491 aa15.9■□□□□ 0.14
SYCP3-201ENST00000266743 ROBO1Q9Y6N7 1651 aa15.89■□□□□ 0.13
SYCP3-201ENST00000266743 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
SYCP3-201ENST00000266743 UBR1Q8IWV7 1749 aa15.88■□□□□ 0.13
SYCP3-201ENST00000266743 KCNA6P17658 529 aa15.87■□□□□ 0.13
SYCP3-201ENST00000266743 RSPH4AQ5TD94 716 aa15.87■□□□□ 0.13
SYCP3-201ENST00000266743 SLIT1O75093 1534 aa15.86■□□□□ 0.13
SYCP3-201ENST00000266743 MAP3K1Q13233 1512 aa15.86■□□□□ 0.13
SYCP3-201ENST00000266743 POLA2Q14181 598 aa15.85■□□□□ 0.13
SYCP3-201ENST00000266743 JCADQ9P266 1359 aa15.85■□□□□ 0.13
SYCP3-201ENST00000266743 TMEM2Q9UHN6 1383 aa15.85■□□□□ 0.13
SYCP3-201ENST00000266743 SLAIN2Q9P270 581 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms