RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 RTF1Q92541 710 aaKnown RBP21.35■■□□□ 1.01
PHRF1-201ENST00000264555 A0A0G2JS52 829 aa21.34■■□□□ 1.01
PHRF1-201ENST00000264555 RWDD1Q9H446 243 aaPredicted RBP21.34■■□□□ 1.01
PHRF1-201ENST00000264555 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
PHRF1-201ENST00000264555 WASHC2AQ641Q2 1341 aa21.33■■□□□ 1.01
PHRF1-201ENST00000264555 TROQ12816 1431 aaPredicted RBP21.33■■□□□ 1
PHRF1-201ENST00000264555 LAMC3Q9Y6N6 1575 aa21.32■■□□□ 1
PHRF1-201ENST00000264555 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
PHRF1-201ENST00000264555 CENPJQ9HC77 1338 aaPredicted RBP21.3■■□□□ 1
PHRF1-201ENST00000264555 MAP3K1Q13233 1512 aa21.29■■□□□ 1
PHRF1-201ENST00000264555 PMFBP1Q8TBY8 1022 aa21.29■■□□□ 1
PHRF1-201ENST00000264555 SUPT6HQ7KZ85 1726 aaKnown RBP21.29■■□□□ 1
PHRF1-201ENST00000264555 EVC2Q86UK5 1308 aa21.29■■□□□ 1
PHRF1-201ENST00000264555 ARHGAP5Q13017 1502 aa21.28■■□□□ 1
PHRF1-201ENST00000264555 ITPRIPQ8IWB1 547 aa21.28■■□□□ 1
PHRF1-201ENST00000264555 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
PHRF1-201ENST00000264555 CUL7Q14999 1698 aa21.28■■□□□ 1
PHRF1-201ENST00000264555 BIVM-ERCC5R4GMW8 1640 aa21.28■■□□□ 1
PHRF1-201ENST00000264555 HSP90AB1P08238 724 aaKnown RBP21.27■■□□□ 1
PHRF1-201ENST00000264555 CGNL1Q0VF96 1302 aa21.27■■□□□ 1
PHRF1-201ENST00000264555 KIAA0586Q9BVV6 1533 aa21.27■■□□□ 1
PHRF1-201ENST00000264555 CFAP44Q96MT7 982 aa21.27■■□□□ 1
PHRF1-201ENST00000264555 SMC4Q9NTJ3 1288 aa21.26■□□□□ 0.99
PHRF1-201ENST00000264555 PCF11O94913 1555 aaKnown RBP21.25■□□□□ 0.99
PHRF1-201ENST00000264555 OS9Q13438 667 aaPredicted RBP21.25■□□□□ 0.99
PHRF1-201ENST00000264555 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
PHRF1-201ENST00000264555 HSCBQ8IWL3 235 aa21.25■□□□□ 0.99
PHRF1-201ENST00000264555 EPRSP07814 1512 aaKnown RBP21.25■□□□□ 0.99
PHRF1-201ENST00000264555 C9orf84Q5VXU9 1444 aa21.25■□□□□ 0.99
PHRF1-201ENST00000264555 KIAA1107Q9UPP5 1409 aa21.25■□□□□ 0.99
PHRF1-201ENST00000264555 TRIM44Q96DX7 344 aaPredicted RBP21.24■□□□□ 0.99
PHRF1-201ENST00000264555 DAPK1P53355 1430 aa21.24■□□□□ 0.99
PHRF1-201ENST00000264555 RRP1P56182 461 aaKnown RBP21.24■□□□□ 0.99
PHRF1-201ENST00000264555 E9PSI1 815 aa21.22■□□□□ 0.99
PHRF1-201ENST00000264555 NAIPQ13075 1403 aa21.21■□□□□ 0.99
PHRF1-201ENST00000264555 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
PHRF1-201ENST00000264555 LMOD3Q0VAK6 560 aa21.2■□□□□ 0.98
PHRF1-201ENST00000264555 CYB5RLQ6IPT4 315 aa21.2■□□□□ 0.98
PHRF1-201ENST00000264555 PAK3O75914 559 aaPredicted RBP21.2■□□□□ 0.98
PHRF1-201ENST00000264555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.2■□□□□ 0.98
PHRF1-201ENST00000264555 NGEFQ8N5V2 710 aa21.2■□□□□ 0.98
PHRF1-201ENST00000264555 AFAP1Q8N556 730 aa21.19■□□□□ 0.98
PHRF1-201ENST00000264555 PLEKHH2Q8IVE3 1493 aa21.19■□□□□ 0.98
PHRF1-201ENST00000264555 ROCK1Q13464 1354 aa21.19■□□□□ 0.98
PHRF1-201ENST00000264555 IPO9Q96P70 1041 aaKnown RBP21.18■□□□□ 0.98
PHRF1-201ENST00000264555 CDK13Q14004 1512 aaKnown RBP21.18■□□□□ 0.98
PHRF1-201ENST00000264555 RRP7AQ9Y3A4 280 aaKnown RBP21.18■□□□□ 0.98
PHRF1-201ENST00000264555 NBPF8Q3BBV2 869 aa21.17■□□□□ 0.98
PHRF1-201ENST00000264555 CLUAP1Q96AJ1 413 aa21.17■□□□□ 0.98
PHRF1-201ENST00000264555 BRD4O60885 1362 aaPredicted RBP21.16■□□□□ 0.98
PHRF1-201ENST00000264555 EXOC6Q8TAG9 804 aa21.16■□□□□ 0.98
PHRF1-201ENST00000264555 APAF1O14727 1248 aa21.15■□□□□ 0.98
PHRF1-201ENST00000264555 CENPQQ7L2Z9 268 aaPredicted RBP21.15■□□□□ 0.98
PHRF1-201ENST00000264555 CHMP4AQ9BY43 222 aa21.14■□□□□ 0.98
PHRF1-201ENST00000264555 NGDNQ8NEJ9 315 aaKnown RBP21.14■□□□□ 0.97
PHRF1-201ENST00000264555 PLIN1O60240 522 aa21.14■□□□□ 0.97
PHRF1-201ENST00000264555 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
PHRF1-201ENST00000264555 MCCP23508 829 aa21.13■□□□□ 0.97
PHRF1-201ENST00000264555 MINK1Q8N4C8 1332 aaPredicted RBP21.12■□□□□ 0.97
PHRF1-201ENST00000264555 STK31Q9BXU1 1019 aa21.11■□□□□ 0.97
PHRF1-201ENST00000264555 URB2Q14146 1524 aaKnown RBP21.1■□□□□ 0.97
PHRF1-201ENST00000264555 CRBNQ96SW2 442 aa21.1■□□□□ 0.97
PHRF1-201ENST00000264555 KCNJ4P48050 445 aa21.1■□□□□ 0.97
PHRF1-201ENST00000264555 APBB1O00213 710 aa21.09■□□□□ 0.97
PHRF1-201ENST00000264555 COG3Q96JB2 828 aa21.09■□□□□ 0.97
PHRF1-201ENST00000264555 AMPHP49418 695 aa21.08■□□□□ 0.96
PHRF1-201ENST00000264555 DEKP35659 375 aaKnown RBP21.07■□□□□ 0.96
PHRF1-201ENST00000264555 SPRYD3Q8NCJ5 442 aa21.07■□□□□ 0.96
PHRF1-201ENST00000264555 PTPN23Q9H3S7 1636 aa21.07■□□□□ 0.96
PHRF1-201ENST00000264555 NBPF1Q3BBV0 1214 aa21.06■□□□□ 0.96
PHRF1-201ENST00000264555 ZKSCAN2Q63HK3 967 aa21.05■□□□□ 0.96
PHRF1-201ENST00000264555 DNAJC5BQ9UF47 199 aa21.05■□□□□ 0.96
PHRF1-201ENST00000264555 NUTM2FA1L443 756 aa21.05■□□□□ 0.96
PHRF1-201ENST00000264555 PDE4AP27815 886 aa21.05■□□□□ 0.96
PHRF1-201ENST00000264555 FAM69CQ0P6D2 419 aa21.05■□□□□ 0.96
PHRF1-201ENST00000264555 HMMRO75330 724 aa21.04■□□□□ 0.96
PHRF1-201ENST00000264555 GLIPR1L2Q4G1C9 344 aa21.04■□□□□ 0.96
PHRF1-201ENST00000264555 RUNDC1Q96C34 613 aa21.04■□□□□ 0.96
PHRF1-201ENST00000264555 DIAPH1O60610 1272 aaKnown RBP21.03■□□□□ 0.96
PHRF1-201ENST00000264555 CFAP70Q5T0N1 1121 aa21.03■□□□□ 0.96
PHRF1-201ENST00000264555 GRIN2AQ12879 1464 aa21.03■□□□□ 0.96
PHRF1-201ENST00000264555 PTMAP06454 111 aaKnown RBP21.03■□□□□ 0.96
PHRF1-201ENST00000264555 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
PHRF1-201ENST00000264555 BCL2L13Q9BXK5 485 aa21.02■□□□□ 0.96
PHRF1-201ENST00000264555 FGD1P98174 961 aa21.02■□□□□ 0.96
PHRF1-201ENST00000264555 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
PHRF1-201ENST00000264555 MFAP1P55081 439 aaKnown RBP21.01■□□□□ 0.95
PHRF1-201ENST00000264555 ABCC5O15440 1437 aa21.01■□□□□ 0.95
PHRF1-201ENST00000264555 ZRSR1Q15695 479 aaKnown RBP21.01■□□□□ 0.95
PHRF1-201ENST00000264555 FAM161AQ3B820 660 aa21.01■□□□□ 0.95
PHRF1-201ENST00000264555 L1TD1Q5T7N2 865 aaKnown RBP21■□□□□ 0.95
PHRF1-201ENST00000264555 COG6Q9Y2V7 657 aa21■□□□□ 0.95
PHRF1-201ENST00000264555 CAMSAP2Q08AD1 1489 aa20.99■□□□□ 0.95
PHRF1-201ENST00000264555 CSB-PGBD3P0DP91 1061 aa20.99■□□□□ 0.95
PHRF1-201ENST00000264555 ANKRD30BQ9BXX2 1392 aa20.99■□□□□ 0.95
PHRF1-201ENST00000264555 TPRNQ4KMQ1 711 aa20.99■□□□□ 0.95
PHRF1-201ENST00000264555 ADAMTS8Q9UP79 889 aa20.99■□□□□ 0.95
PHRF1-201ENST00000264555 SLKQ9H2G2 1235 aaPredicted RBP20.99■□□□□ 0.95
PHRF1-201ENST00000264555 TMEM132EQ6IEE7 984 aa20.99■□□□□ 0.95
PHRF1-201ENST00000264555 PLB1Q6P1J6 1458 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms