RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
PDZRN3-201ENST00000263666 CCDC144AA2RUR9 1427 aa21.08■□□□□ 0.96
PDZRN3-201ENST00000263666 THOC2Q8NI27 1593 aaKnown RBP21.06■□□□□ 0.96
PDZRN3-201ENST00000263666 CLUAP1Q96AJ1 413 aa21.06■□□□□ 0.96
PDZRN3-201ENST00000263666 BCL2L13Q9BXK5 485 aa21.06■□□□□ 0.96
PDZRN3-201ENST00000263666 ADAMTS8Q9UP79 889 aa21.06■□□□□ 0.96
PDZRN3-201ENST00000263666 DDRGK1Q96HY6 314 aa21.05■□□□□ 0.96
PDZRN3-201ENST00000263666 CUL7Q14999 1698 aa21.05■□□□□ 0.96
PDZRN3-201ENST00000263666 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
PDZRN3-201ENST00000263666 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.04■□□□□ 0.96
PDZRN3-201ENST00000263666 IQGAP2Q13576 1575 aa21.04■□□□□ 0.96
PDZRN3-201ENST00000263666 PPM1GO15355 546 aaPredicted RBP21.04■□□□□ 0.96
PDZRN3-201ENST00000263666 KIAA1107Q9UPP5 1409 aa21.03■□□□□ 0.96
PDZRN3-201ENST00000263666 APAF1O14727 1248 aa21.02■□□□□ 0.96
PDZRN3-201ENST00000263666 SLKQ9H2G2 1235 aaPredicted RBP21.02■□□□□ 0.96
PDZRN3-201ENST00000263666 KANK1Q14678 1352 aa21.02■□□□□ 0.96
PDZRN3-201ENST00000263666 PLB1Q6P1J6 1458 aa21.02■□□□□ 0.96
PDZRN3-201ENST00000263666 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
PDZRN3-201ENST00000263666 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.96
PDZRN3-201ENST00000263666 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
PDZRN3-201ENST00000263666 UPF2Q9HAU5 1272 aaKnown RBP21.01■□□□□ 0.95
PDZRN3-201ENST00000263666 GOLGA2Q08379 1002 aa21.01■□□□□ 0.95
PDZRN3-201ENST00000263666 RPRD2Q5VT52 1461 aaKnown RBP21■□□□□ 0.95
PDZRN3-201ENST00000263666 C20orf194Q5TEA3 1177 aa20.99■□□□□ 0.95
PDZRN3-201ENST00000263666 CDCA8Q53HL2 280 aa20.98■□□□□ 0.95
PDZRN3-201ENST00000263666 SMG6Q86US8 1419 aaKnown RBP20.98■□□□□ 0.95
PDZRN3-201ENST00000263666 U2SURPO15042 1029 aaKnown RBP20.98■□□□□ 0.95
PDZRN3-201ENST00000263666 HECW1Q76N89 1606 aa20.98■□□□□ 0.95
PDZRN3-201ENST00000263666 SLC24A1O60721 1099 aa20.96■□□□□ 0.95
PDZRN3-201ENST00000263666 UGGT2Q9NYU1 1516 aa20.96■□□□□ 0.95
PDZRN3-201ENST00000263666 PDE3BQ13370 1112 aa20.96■□□□□ 0.95
PDZRN3-201ENST00000263666 AFAP1Q8N556 730 aa20.96■□□□□ 0.95
PDZRN3-201ENST00000263666 MAGI3Q5TCQ9 1506 aa20.95■□□□□ 0.94
PDZRN3-201ENST00000263666 MORC1Q86VD1 984 aa20.94■□□□□ 0.94
PDZRN3-201ENST00000263666 TROQ12816 1431 aaPredicted RBP20.94■□□□□ 0.94
PDZRN3-201ENST00000263666 FAM69CQ0P6D2 419 aa20.94■□□□□ 0.94
PDZRN3-201ENST00000263666 STK26Q9P289 416 aa20.94■□□□□ 0.94
PDZRN3-201ENST00000263666 TRAK1Q9UPV9 953 aa20.94■□□□□ 0.94
PDZRN3-201ENST00000263666 IL27Q8NEV9 243 aa20.93■□□□□ 0.94
PDZRN3-201ENST00000263666 KDM6BO15054 1643 aa20.93■□□□□ 0.94
PDZRN3-201ENST00000263666 COG6Q9Y2V7 657 aa20.93■□□□□ 0.94
PDZRN3-201ENST00000263666 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
PDZRN3-201ENST00000263666 BRD4O60885 1362 aaPredicted RBP20.92■□□□□ 0.94
PDZRN3-201ENST00000263666 HSP90AA1P07900 732 aaKnown RBP20.92■□□□□ 0.94
PDZRN3-201ENST00000263666 FTSJ3Q8IY81 847 aaKnown RBP20.91■□□□□ 0.94
PDZRN3-201ENST00000263666 WASHC2CQ9Y4E1 1318 aa20.89■□□□□ 0.93
PDZRN3-201ENST00000263666 CAMSAP2Q08AD1 1489 aa20.89■□□□□ 0.93
PDZRN3-201ENST00000263666 ARHGEF11O15085 1522 aa20.89■□□□□ 0.93
PDZRN3-201ENST00000263666 ROCK1Q13464 1354 aa20.88■□□□□ 0.93
PDZRN3-201ENST00000263666 BCAR3O75815 825 aa20.86■□□□□ 0.93
PDZRN3-201ENST00000263666 U2AF1L5P0DN76 240 aaPredicted RBP20.86■□□□□ 0.93
PDZRN3-201ENST00000263666 U2AF1Q01081 240 aaKnown RBP eCLIP20.86■□□□□ 0.93
PDZRN3-201ENST00000263666 CTTNBP2Q8WZ74 1663 aa20.86■□□□□ 0.93
PDZRN3-201ENST00000263666 BACH2Q9BYV9 841 aa20.85■□□□□ 0.93
PDZRN3-201ENST00000263666 PANK1Q8TE04 598 aa20.85■□□□□ 0.93
PDZRN3-201ENST00000263666 GZF1Q9H116 711 aaPredicted RBP20.85■□□□□ 0.93
PDZRN3-201ENST00000263666 PPP2R1AP30153 589 aa20.83■□□□□ 0.93
PDZRN3-201ENST00000263666 DHX29Q7Z478 1369 aaKnown RBP20.83■□□□□ 0.93
PDZRN3-201ENST00000263666 CFAP70Q5T0N1 1121 aa20.83■□□□□ 0.92
PDZRN3-201ENST00000263666 CFAP53Q96M91 514 aa20.83■□□□□ 0.92
PDZRN3-201ENST00000263666 BECN1Q14457 450 aa20.82■□□□□ 0.92
PDZRN3-201ENST00000263666 ARHGAP5Q13017 1502 aa20.8■□□□□ 0.92
PDZRN3-201ENST00000263666 SRPK2P78362 688 aaKnown RBP20.8■□□□□ 0.92
PDZRN3-201ENST00000263666 CENPJQ9HC77 1338 aaPredicted RBP20.79■□□□□ 0.92
PDZRN3-201ENST00000263666 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
PDZRN3-201ENST00000263666 TMEM132EQ6IEE7 984 aa20.79■□□□□ 0.92
PDZRN3-201ENST00000263666 CENPQQ7L2Z9 268 aaPredicted RBP20.79■□□□□ 0.92
PDZRN3-201ENST00000263666 NUP153P49790 1475 aaKnown RBP20.79■□□□□ 0.92
PDZRN3-201ENST00000263666 POGKQ9P215 609 aa20.78■□□□□ 0.92
PDZRN3-201ENST00000263666 WDR62O43379 1518 aa20.77■□□□□ 0.92
PDZRN3-201ENST00000263666 BRPF3Q9ULD4 1205 aa20.77■□□□□ 0.92
PDZRN3-201ENST00000263666 PLEKHG5O94827 1062 aa20.77■□□□□ 0.92
PDZRN3-201ENST00000263666 NFKBIBQ15653 356 aa20.77■□□□□ 0.91
PDZRN3-201ENST00000263666 GPATCH8Q9UKJ3 1502 aaKnown RBP20.76■□□□□ 0.91
PDZRN3-201ENST00000263666 DISP3Q9P2K9 1392 aa20.76■□□□□ 0.91
PDZRN3-201ENST00000263666 MS4A1P11836 297 aa20.75■□□□□ 0.91
PDZRN3-201ENST00000263666 MAPK8IP3Q9UPT6 1336 aa20.74■□□□□ 0.91
PDZRN3-201ENST00000263666 TEX14Q8IWB6 1497 aa20.73■□□□□ 0.91
PDZRN3-201ENST00000263666 MFAP1P55081 439 aaKnown RBP20.73■□□□□ 0.91
PDZRN3-201ENST00000263666 EIF4G3O43432 1585 aaKnown RBP20.73■□□□□ 0.91
PDZRN3-201ENST00000263666 TCOF1Q13428 1488 aaKnown RBP20.73■□□□□ 0.91
PDZRN3-201ENST00000263666 SOX12O15370 315 aa20.72■□□□□ 0.91
PDZRN3-201ENST00000263666 FRAT2O75474 233 aaPredicted RBP20.72■□□□□ 0.91
PDZRN3-201ENST00000263666 ANO8Q9HCE9 1232 aaPredicted RBP20.72■□□□□ 0.91
PDZRN3-201ENST00000263666 PZPP20742 1482 aa20.72■□□□□ 0.91
PDZRN3-201ENST00000263666 ITPRIPQ8IWB1 547 aa20.72■□□□□ 0.91
PDZRN3-201ENST00000263666 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
PDZRN3-201ENST00000263666 C14orf37Q86TY3 774 aa20.71■□□□□ 0.91
PDZRN3-201ENST00000263666 GSE1Q14687 1217 aa20.7■□□□□ 0.91
PDZRN3-201ENST00000263666 RAPGEF3O95398 923 aa20.7■□□□□ 0.9
PDZRN3-201ENST00000263666 DENND4BO75064 1496 aaPredicted RBP20.7■□□□□ 0.9
PDZRN3-201ENST00000263666 ELL2O00472 640 aaPredicted RBP20.7■□□□□ 0.9
PDZRN3-201ENST00000263666 FOXD4L1Q9NU39 408 aa20.69■□□□□ 0.9
PDZRN3-201ENST00000263666 ERBINQ96RT1 1412 aa20.69■□□□□ 0.9
PDZRN3-201ENST00000263666 SLC12A5Q9H2X9 1139 aa20.68■□□□□ 0.9
PDZRN3-201ENST00000263666 SMC4Q9NTJ3 1288 aa20.68■□□□□ 0.9
PDZRN3-201ENST00000263666 APBB1O00213 710 aa20.68■□□□□ 0.9
PDZRN3-201ENST00000263666 TPRNQ4KMQ1 711 aa20.68■□□□□ 0.9
PDZRN3-201ENST00000263666 SPATA31E1Q6ZUB1 1445 aa20.66■□□□□ 0.9
PDZRN3-201ENST00000263666 SCAPERQ9BY12 1400 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms