RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 CENPJQ9HC77 1338 aaPredicted RBP21.12■□□□□ 0.97
CROCCP3-201ENST00000263511 WIZO95785 1651 aa21.12■□□□□ 0.97
CROCCP3-201ENST00000263511 PTMSP20962 102 aa21.12■□□□□ 0.97
CROCCP3-201ENST00000263511 ATAD2BQ9ULI0 1458 aa21.11■□□□□ 0.97
CROCCP3-201ENST00000263511 TRIM6-TRIM34B2RNG4 842 aa21.1■□□□□ 0.97
CROCCP3-201ENST00000263511 CLUAP1Q96AJ1 413 aa21.09■□□□□ 0.97
CROCCP3-201ENST00000263511 MSNP26038 577 aaKnown RBP21.09■□□□□ 0.97
CROCCP3-201ENST00000263511 G3V3G9 751 aa21.08■□□□□ 0.97
CROCCP3-201ENST00000263511 GTF2E1P29083 439 aaPredicted RBP21.08■□□□□ 0.97
CROCCP3-201ENST00000263511 DCAF8Q5TAQ9 597 aa21.08■□□□□ 0.97
CROCCP3-201ENST00000263511 KIF15Q9NS87 1388 aa21.07■□□□□ 0.96
CROCCP3-201ENST00000263511 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
CROCCP3-201ENST00000263511 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
CROCCP3-201ENST00000263511 TSHZ2Q9NRE2 1034 aa21.07■□□□□ 0.96
CROCCP3-201ENST00000263511 COG3Q96JB2 828 aa21.06■□□□□ 0.96
CROCCP3-201ENST00000263511 ST20-MTHFSA0A0A6YYL1 179 aa21.06■□□□□ 0.96
CROCCP3-201ENST00000263511 EVC2Q86UK5 1308 aa21.05■□□□□ 0.96
CROCCP3-201ENST00000263511 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
CROCCP3-201ENST00000263511 MFAP1P55081 439 aaKnown RBP21.05■□□□□ 0.96
CROCCP3-201ENST00000263511 CCDC34Q96HJ3 373 aa21.04■□□□□ 0.96
CROCCP3-201ENST00000263511 PANK3Q9H999 370 aa21.03■□□□□ 0.96
CROCCP3-201ENST00000263511 MYBBP1AQ9BQG0 1328 aaKnown RBP21.03■□□□□ 0.96
CROCCP3-201ENST00000263511 HSP90B1P14625 803 aaKnown RBP21.03■□□□□ 0.96
CROCCP3-201ENST00000263511 CGNL1Q0VF96 1302 aa21.03■□□□□ 0.96
CROCCP3-201ENST00000263511 SYAP1Q96A49 352 aaPredicted RBP21.02■□□□□ 0.96
CROCCP3-201ENST00000263511 FRAT2O75474 233 aaPredicted RBP21.01■□□□□ 0.95
CROCCP3-201ENST00000263511 C1orf141Q5JVX7 400 aa21.01■□□□□ 0.95
CROCCP3-201ENST00000263511 SLKQ9H2G2 1235 aaPredicted RBP21.01■□□□□ 0.95
CROCCP3-201ENST00000263511 KIAA2012Q0VF49 1180 aa21■□□□□ 0.95
CROCCP3-201ENST00000263511 RRP7AQ9Y3A4 280 aaKnown RBP20.98■□□□□ 0.95
CROCCP3-201ENST00000263511 EVA1CP58658 441 aa20.97■□□□□ 0.95
CROCCP3-201ENST00000263511 NCBP3Q53F19 620 aaKnown RBP20.96■□□□□ 0.95
CROCCP3-201ENST00000263511 TEFQ10587 303 aa20.96■□□□□ 0.95
CROCCP3-201ENST00000263511 TPM4P67936 248 aa20.96■□□□□ 0.95
CROCCP3-201ENST00000263511 TOMM22Q9NS69 142 aa20.96■□□□□ 0.95
CROCCP3-201ENST00000263511 MINK1Q8N4C8 1332 aaPredicted RBP20.96■□□□□ 0.95
CROCCP3-201ENST00000263511 CSPP1Q1MSJ5 1256 aa20.94■□□□□ 0.94
CROCCP3-201ENST00000263511 KIF3AQ9Y496 699 aa20.93■□□□□ 0.94
CROCCP3-201ENST00000263511 RASSF8Q8NHQ8 419 aa20.93■□□□□ 0.94
CROCCP3-201ENST00000263511 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
CROCCP3-201ENST00000263511 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
CROCCP3-201ENST00000263511 ST18O60284 1047 aa20.91■□□□□ 0.94
CROCCP3-201ENST00000263511 TTC5Q8N0Z6 440 aa20.91■□□□□ 0.94
CROCCP3-201ENST00000263511 E9PSI1 815 aa20.91■□□□□ 0.94
CROCCP3-201ENST00000263511 GZF1Q9H116 711 aaPredicted RBP20.9■□□□□ 0.94
CROCCP3-201ENST00000263511 KIF16BQ96L93 1317 aa20.89■□□□□ 0.94
CROCCP3-201ENST00000263511 USP47Q96K76 1375 aa20.89■□□□□ 0.93
CROCCP3-201ENST00000263511 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.89■□□□□ 0.93
CROCCP3-201ENST00000263511 NEXNQ0ZGT2 675 aa20.89■□□□□ 0.93
CROCCP3-201ENST00000263511 NOL8Q76FK4 1167 aaKnown RBP20.89■□□□□ 0.93
CROCCP3-201ENST00000263511 ZKSCAN2Q63HK3 967 aa20.88■□□□□ 0.93
CROCCP3-201ENST00000263511 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
CROCCP3-201ENST00000263511 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
CROCCP3-201ENST00000263511 MYOM3Q5VTT5 1437 aa20.86■□□□□ 0.93
CROCCP3-201ENST00000263511 PSME1Q06323 249 aa20.85■□□□□ 0.93
CROCCP3-201ENST00000263511 FAM69CQ0P6D2 419 aa20.85■□□□□ 0.93
CROCCP3-201ENST00000263511 DIAPH1O60610 1272 aaKnown RBP20.85■□□□□ 0.93
CROCCP3-201ENST00000263511 CHMP4CQ96CF2 233 aa20.85■□□□□ 0.93
CROCCP3-201ENST00000263511 BCL2L13Q9BXK5 485 aa20.85■□□□□ 0.93
CROCCP3-201ENST00000263511 PRKRIP1Q9H875 184 aaPredicted RBP20.84■□□□□ 0.93
CROCCP3-201ENST00000263511 MARCH6O60337 910 aa20.83■□□□□ 0.93
CROCCP3-201ENST00000263511 RILPL2Q969X0 211 aa20.83■□□□□ 0.92
CROCCP3-201ENST00000263511 LRRFIP1Q32MZ4 808 aaKnown RBP20.83■□□□□ 0.92
CROCCP3-201ENST00000263511 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
CROCCP3-201ENST00000263511 STAC3Q96MF2 364 aa20.82■□□□□ 0.92
CROCCP3-201ENST00000263511 SF3A1Q15459 793 aaKnown RBP20.82■□□□□ 0.92
CROCCP3-201ENST00000263511 CENPQQ7L2Z9 268 aaPredicted RBP20.82■□□□□ 0.92
CROCCP3-201ENST00000263511 RUSC2Q8N2Y8 1516 aa20.81■□□□□ 0.92
CROCCP3-201ENST00000263511 EIF2S2P20042 333 aaKnown RBP20.81■□□□□ 0.92
CROCCP3-201ENST00000263511 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
CROCCP3-201ENST00000263511 C9orf78Q9NZ63 289 aaPredicted RBP20.81■□□□□ 0.92
CROCCP3-201ENST00000263511 MSH5O43196 834 aa20.81■□□□□ 0.92
CROCCP3-201ENST00000263511 FOXD4L1Q9NU39 408 aa20.81■□□□□ 0.92
CROCCP3-201ENST00000263511 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
CROCCP3-201ENST00000263511 IPO9Q96P70 1041 aaKnown RBP20.8■□□□□ 0.92
CROCCP3-201ENST00000263511 NOC3LQ8WTT2 800 aaKnown RBP20.79■□□□□ 0.92
CROCCP3-201ENST00000263511 APAF1O14727 1248 aa20.79■□□□□ 0.92
CROCCP3-201ENST00000263511 VPS53Q5VIR6 699 aa20.79■□□□□ 0.92
CROCCP3-201ENST00000263511 IGF1RP08069 1367 aa20.78■□□□□ 0.92
CROCCP3-201ENST00000263511 GOLGA6L3A6NEY3 463 aa20.78■□□□□ 0.92
CROCCP3-201ENST00000263511 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.78■□□□□ 0.92
CROCCP3-201ENST00000263511 DDX58O95786 925 aaKnown RBP20.77■□□□□ 0.92
CROCCP3-201ENST00000263511 PHF14O94880 888 aa20.77■□□□□ 0.92
CROCCP3-201ENST00000263511 AKAP17AQ02040 695 aaKnown RBP20.77■□□□□ 0.91
CROCCP3-201ENST00000263511 API5Q9BZZ5 524 aaKnown RBP20.77■□□□□ 0.91
CROCCP3-201ENST00000263511 DIAPH3Q9NSV4 1193 aa20.77■□□□□ 0.91
CROCCP3-201ENST00000263511 H3BQV1 296 aa20.76■□□□□ 0.91
CROCCP3-201ENST00000263511 IFFO2Q5TF58 517 aa20.76■□□□□ 0.91
CROCCP3-201ENST00000263511 NOL10Q9BSC4 688 aaKnown RBP20.76■□□□□ 0.91
CROCCP3-201ENST00000263511 RIPK4P57078 832 aa20.76■□□□□ 0.91
CROCCP3-201ENST00000263511 FAM184AQ8NB25 1140 aa20.75■□□□□ 0.91
CROCCP3-201ENST00000263511 CREBRFQ8IUR6 639 aa20.75■□□□□ 0.91
CROCCP3-201ENST00000263511 SYNE3Q6ZMZ3 975 aa20.75■□□□□ 0.91
CROCCP3-201ENST00000263511 RUFY2Q8WXA3 655 aa20.75■□□□□ 0.91
CROCCP3-201ENST00000263511 SYTL4Q96C24 671 aaPredicted RBP20.75■□□□□ 0.91
CROCCP3-201ENST00000263511 DDX19BQ9UMR2 479 aa20.75■□□□□ 0.91
CROCCP3-201ENST00000263511 AMOTL1Q8IY63 956 aa20.74■□□□□ 0.91
CROCCP3-201ENST00000263511 ATF3P18847 181 aa20.74■□□□□ 0.91
CROCCP3-201ENST00000263511 COG6Q9Y2V7 657 aa20.74■□□□□ 0.91
CROCCP3-201ENST00000263511 RRP1P56182 461 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms