RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 MAST1Q9Y2H9 1570 aa14.48□□□□□ -0.09
COMMD9-201ENST00000263401 ABCC1P33527 1531 aa14.48□□□□□ -0.09
COMMD9-201ENST00000263401 KDM5CP41229 1560 aa14.48□□□□□ -0.09
COMMD9-201ENST00000263401 ST20-MTHFSA0A0A6YYL1 179 aa14.47□□□□□ -0.09
COMMD9-201ENST00000263401 FKBP8Q14318 412 aa14.47□□□□□ -0.09
COMMD9-201ENST00000263401 NBPF1Q3BBV0 1214 aa14.47□□□□□ -0.09
COMMD9-201ENST00000263401 CCDC144AA2RUR9 1427 aa14.47□□□□□ -0.09
COMMD9-201ENST00000263401 UNC13BO14795 1591 aa14.46□□□□□ -0.09
COMMD9-201ENST00000263401 SPAG9O60271 1321 aaKnown RBP14.46□□□□□ -0.09
COMMD9-201ENST00000263401 PLXNC1O60486 1568 aa14.46□□□□□ -0.1
COMMD9-201ENST00000263401 RALGAPBQ86X10 1494 aa14.45□□□□□ -0.1
COMMD9-201ENST00000263401 POLR1AO95602 1720 aaPredicted RBP14.45□□□□□ -0.1
COMMD9-201ENST00000263401 MRS2Q9HD23 443 aa14.45□□□□□ -0.1
COMMD9-201ENST00000263401 UHRF1BP1Q6BDS2 1440 aa14.44□□□□□ -0.1
COMMD9-201ENST00000263401 WDR7Q9Y4E6 1490 aa14.44□□□□□ -0.1
COMMD9-201ENST00000263401 ROCK2O75116 1388 aaKnown RBP14.44□□□□□ -0.1
COMMD9-201ENST00000263401 DUOX2Q9NRD8 1548 aa14.44□□□□□ -0.1
COMMD9-201ENST00000263401 IQGAP3Q86VI3 1631 aa14.42□□□□□ -0.1
COMMD9-201ENST00000263401 ASXL2Q76L83 1435 aa14.41□□□□□ -0.1
COMMD9-201ENST00000263401 FANCAO15360 1455 aa14.41□□□□□ -0.1
COMMD9-201ENST00000263401 A2MP01023 1474 aa14.41□□□□□ -0.1
COMMD9-201ENST00000263401 DHX29Q7Z478 1369 aaKnown RBP14.41□□□□□ -0.1
COMMD9-201ENST00000263401 IRX6P78412 446 aaPredicted RBP14.4□□□□□ -0.1
COMMD9-201ENST00000263401 ZFYVE16Q7Z3T8 1539 aa14.39□□□□□ -0.11
COMMD9-201ENST00000263401 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
COMMD9-201ENST00000263401 PRAG1Q86YV5 1406 aa14.39□□□□□ -0.11
COMMD9-201ENST00000263401 ERBINQ96RT1 1412 aa14.39□□□□□ -0.11
COMMD9-201ENST00000263401 SCAPERQ9BY12 1400 aa14.39□□□□□ -0.11
COMMD9-201ENST00000263401 KIF3BO15066 747 aa14.37□□□□□ -0.11
COMMD9-201ENST00000263401 ADGRL1O94910 1474 aa14.37□□□□□ -0.11
COMMD9-201ENST00000263401 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
COMMD9-201ENST00000263401 MAGI2Q86UL8 1455 aa14.36□□□□□ -0.11
COMMD9-201ENST00000263401 E9PCH4 1651 aa14.36□□□□□ -0.11
COMMD9-201ENST00000263401 ABCA9Q8IUA7 1624 aa14.35□□□□□ -0.11
COMMD9-201ENST00000263401 ATP7AQ04656 1500 aa14.34□□□□□ -0.11
COMMD9-201ENST00000263401 NPM1P06748 294 aaKnown RBP eCLIP14.32□□□□□ -0.12
COMMD9-201ENST00000263401 NEFLP07196 543 aa14.31□□□□□ -0.12
COMMD9-201ENST00000263401 ATP10AO60312 1499 aa14.31□□□□□ -0.12
COMMD9-201ENST00000263401 DISP3Q9P2K9 1392 aa14.31□□□□□ -0.12
COMMD9-201ENST00000263401 UGGT1Q9NYU2 1555 aa14.3□□□□□ -0.12
COMMD9-201ENST00000263401 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
COMMD9-201ENST00000263401 RTEL1-TNFRSF6BF6WH68 1400 aa14.3□□□□□ -0.12
COMMD9-201ENST00000263401 ARAP3Q8WWN8 1544 aa14.3□□□□□ -0.12
COMMD9-201ENST00000263401 CFAP65Q6ZU64 1925 aaKnown RBP14.3□□□□□ -0.12
COMMD9-201ENST00000263401 CLTCL1P53675 1640 aa14.28□□□□□ -0.12
COMMD9-201ENST00000263401 TESK2Q96S53 571 aa14.28□□□□□ -0.12
COMMD9-201ENST00000263401 KIDINS220Q9ULH0 1771 aa14.27□□□□□ -0.13
COMMD9-201ENST00000263401 SPHKAPQ2M3C7 1700 aa14.26□□□□□ -0.13
COMMD9-201ENST00000263401 RAPGEF3O95398 923 aa14.26□□□□□ -0.13
COMMD9-201ENST00000263401 CD109Q6YHK3 1445 aa14.26□□□□□ -0.13
COMMD9-201ENST00000263401 DEPDC5O75140 1603 aa14.25□□□□□ -0.13
COMMD9-201ENST00000263401 ARID4BQ4LE39 1312 aaPredicted RBP14.25□□□□□ -0.13
COMMD9-201ENST00000263401 CC2D1BQ5T0F9 858 aaKnown RBP14.25□□□□□ -0.13
COMMD9-201ENST00000263401 GPRASP1Q5JY77 1395 aa14.25□□□□□ -0.13
COMMD9-201ENST00000263401 PRDM15P57071 1507 aaPredicted RBP14.25□□□□□ -0.13
COMMD9-201ENST00000263401 GGT6Q6P531 493 aa14.25□□□□□ -0.13
COMMD9-201ENST00000263401 MROH1Q8NDA8 1641 aa14.24□□□□□ -0.13
COMMD9-201ENST00000263401 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
COMMD9-201ENST00000263401 SENP3Q9H4L4 574 aaPredicted RBP14.24□□□□□ -0.13
COMMD9-201ENST00000263401 TRPM2O94759 1503 aa14.24□□□□□ -0.13
COMMD9-201ENST00000263401 KANK1Q14678 1352 aa14.24□□□□□ -0.13
COMMD9-201ENST00000263401 TET3O43151 1660 aa14.23□□□□□ -0.13
COMMD9-201ENST00000263401 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
COMMD9-201ENST00000263401 CHGAP10645 457 aaKnown RBP14.22□□□□□ -0.13
COMMD9-201ENST00000263401 SALL2Q9Y467 1007 aaPredicted RBP14.22□□□□□ -0.13
COMMD9-201ENST00000263401 ZBED9Q6R2W3 1325 aa14.22□□□□□ -0.13
COMMD9-201ENST00000263401 MADDQ8WXG6 1647 aa14.22□□□□□ -0.13
COMMD9-201ENST00000263401 CYB5RLQ6IPT4 315 aa14.22□□□□□ -0.13
COMMD9-201ENST00000263401 CEP152O94986 1710 aa14.22□□□□□ -0.13
COMMD9-201ENST00000263401 PANK3Q9H999 370 aa14.22□□□□□ -0.13
COMMD9-201ENST00000263401 PTPRTO14522 1441 aa14.21□□□□□ -0.13
COMMD9-201ENST00000263401 PNISRQ8TF01 805 aaKnown RBP14.21□□□□□ -0.13
COMMD9-201ENST00000263401 COL17A1Q9UMD9 1497 aaPredicted RBP14.21□□□□□ -0.13
COMMD9-201ENST00000263401 EIF2AK4Q9P2K8 1649 aaKnown RBP14.2□□□□□ -0.14
COMMD9-201ENST00000263401 VWDEQ8N2E2 1590 aa14.2□□□□□ -0.14
COMMD9-201ENST00000263401 ZNF518AQ6AHZ1 1483 aa14.2□□□□□ -0.14
COMMD9-201ENST00000263401 ADGRF5Q8IZF2 1346 aa14.19□□□□□ -0.14
COMMD9-201ENST00000263401 PER1O15534 1290 aaPredicted RBP14.19□□□□□ -0.14
COMMD9-201ENST00000263401 CFAP70Q5T0N1 1121 aa14.19□□□□□ -0.14
COMMD9-201ENST00000263401 PPRC1Q5VV67 1664 aaKnown RBP14.19□□□□□ -0.14
COMMD9-201ENST00000263401 RNF17Q9BXT8 1623 aaKnown RBP14.19□□□□□ -0.14
COMMD9-201ENST00000263401 MYBBP1AQ9BQG0 1328 aaKnown RBP14.18□□□□□ -0.14
COMMD9-201ENST00000263401 TMF1P82094 1093 aa14.18□□□□□ -0.14
COMMD9-201ENST00000263401 NUTM2DQ5VT03 806 aaPredicted RBP14.18□□□□□ -0.14
COMMD9-201ENST00000263401 POGZQ7Z3K3 1410 aa14.18□□□□□ -0.14
COMMD9-201ENST00000263401 FRMPD1Q5SYB0 1578 aa14.17□□□□□ -0.14
COMMD9-201ENST00000263401 MROH2AA6NES4 1674 aa14.16□□□□□ -0.14
COMMD9-201ENST00000263401 LAMC1P11047 1609 aa14.16□□□□□ -0.14
COMMD9-201ENST00000263401 KTN1Q86UP2 1357 aaKnown RBP14.16□□□□□ -0.14
COMMD9-201ENST00000263401 EFCAB6Q5THR3 1501 aa14.15□□□□□ -0.14
COMMD9-201ENST00000263401 ABCA6Q8N139 1617 aa14.14□□□□□ -0.15
COMMD9-201ENST00000263401 RALBP1Q15311 655 aa14.14□□□□□ -0.15
COMMD9-201ENST00000263401 IQGAP1P46940 1657 aa14.14□□□□□ -0.15
COMMD9-201ENST00000263401 PARD3Q8TEW0 1356 aa14.13□□□□□ -0.15
COMMD9-201ENST00000263401 WASHC2CQ9Y4E1 1318 aa14.12□□□□□ -0.15
COMMD9-201ENST00000263401 HECW2Q9P2P5 1572 aa14.12□□□□□ -0.15
COMMD9-201ENST00000263401 KIF1BO60333 1816 aa14.12□□□□□ -0.15
COMMD9-201ENST00000263401 NPATQ14207 1427 aa14.12□□□□□ -0.15
COMMD9-201ENST00000263401 BRD4O60885 1362 aaPredicted RBP14.12□□□□□ -0.15
COMMD9-201ENST00000263401 NOS1P29475 1434 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms