RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 FAM135AQ9P2D6 1515 aa23.53■■□□□ 1.36
RHBDF1-201ENST00000262316 PLCH2O75038 1416 aa23.52■■□□□ 1.36
RHBDF1-201ENST00000262316 KIF3BO15066 747 aa23.52■■□□□ 1.36
RHBDF1-201ENST00000262316 ZCCHC11Q5TAX3 1644 aaKnown RBP23.49■■□□□ 1.35
RHBDF1-201ENST00000262316 SALL2Q9Y467 1007 aaPredicted RBP23.49■■□□□ 1.35
RHBDF1-201ENST00000262316 ARHGEF5Q12774 1597 aa23.48■■□□□ 1.35
RHBDF1-201ENST00000262316 OSCARQ8IYS5 282 aa23.47■■□□□ 1.35
RHBDF1-201ENST00000262316 NPM1P06748 294 aaKnown RBP eCLIP23.46■■□□□ 1.35
RHBDF1-201ENST00000262316 CLASP1Q7Z460 1538 aa23.46■■□□□ 1.35
RHBDF1-201ENST00000262316 PLA2R1Q13018 1463 aa23.46■■□□□ 1.35
RHBDF1-201ENST00000262316 BCORL1Q5H9F3 1711 aa23.44■■□□□ 1.34
RHBDF1-201ENST00000262316 SCAPERQ9BY12 1400 aa23.44■■□□□ 1.34
RHBDF1-201ENST00000262316 CHGAP10645 457 aaKnown RBP23.41■■□□□ 1.34
RHBDF1-201ENST00000262316 MYO5CQ9NQX4 1742 aa23.41■■□□□ 1.34
RHBDF1-201ENST00000262316 TMC1Q8TDI8 760 aa23.4■■□□□ 1.34
RHBDF1-201ENST00000262316 CC2D1BQ5T0F9 858 aaKnown RBP23.39■■□□□ 1.33
RHBDF1-201ENST00000262316 DHX29Q7Z478 1369 aaKnown RBP23.38■■□□□ 1.33
RHBDF1-201ENST00000262316 GGT6Q6P531 493 aa23.37■■□□□ 1.33
RHBDF1-201ENST00000262316 RALGAPBQ86X10 1494 aa23.34■■□□□ 1.33
RHBDF1-201ENST00000262316 UHRF1BP1Q6BDS2 1440 aa23.34■■□□□ 1.33
RHBDF1-201ENST00000262316 ASXL2Q76L83 1435 aa23.34■■□□□ 1.33
RHBDF1-201ENST00000262316 FANCAO15360 1455 aa23.34■■□□□ 1.33
RHBDF1-201ENST00000262316 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.32
RHBDF1-201ENST00000262316 A2MP01023 1474 aa23.32■■□□□ 1.32
RHBDF1-201ENST00000262316 TSHZ2Q9NRE2 1034 aa23.32■■□□□ 1.32
RHBDF1-201ENST00000262316 KDM5CP41229 1560 aa23.32■■□□□ 1.32
RHBDF1-201ENST00000262316 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
RHBDF1-201ENST00000262316 PRAG1Q86YV5 1406 aa23.31■■□□□ 1.32
RHBDF1-201ENST00000262316 UHRF1BP1LA0JNW5 1464 aa23.31■■□□□ 1.32
RHBDF1-201ENST00000262316 RAPGEF3O95398 923 aa23.3■■□□□ 1.32
RHBDF1-201ENST00000262316 CYB5RLQ6IPT4 315 aa23.3■■□□□ 1.32
RHBDF1-201ENST00000262316 DUOX2Q9NRD8 1548 aa23.29■■□□□ 1.32
RHBDF1-201ENST00000262316 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
RHBDF1-201ENST00000262316 ABCC1P33527 1531 aa23.28■■□□□ 1.32
RHBDF1-201ENST00000262316 PANK3Q9H999 370 aa23.28■■□□□ 1.32
RHBDF1-201ENST00000262316 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.32
RHBDF1-201ENST00000262316 ADGRL1O94910 1474 aa23.26■■□□□ 1.31
RHBDF1-201ENST00000262316 TESK2Q96S53 571 aa23.24■■□□□ 1.31
RHBDF1-201ENST00000262316 ERBINQ96RT1 1412 aa23.23■■□□□ 1.31
RHBDF1-201ENST00000262316 CFAP70Q5T0N1 1121 aa23.22■■□□□ 1.31
RHBDF1-201ENST00000262316 PNISRQ8TF01 805 aaKnown RBP23.22■■□□□ 1.31
RHBDF1-201ENST00000262316 MAST1Q9Y2H9 1570 aa23.2■■□□□ 1.31
RHBDF1-201ENST00000262316 TMF1P82094 1093 aa23.19■■□□□ 1.3
RHBDF1-201ENST00000262316 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
RHBDF1-201ENST00000262316 B4GALNT3Q6L9W6 998 aa23.18■■□□□ 1.3
RHBDF1-201ENST00000262316 KANK1Q14678 1352 aa23.18■■□□□ 1.3
RHBDF1-201ENST00000262316 UNC13BO14795 1591 aa23.18■■□□□ 1.3
RHBDF1-201ENST00000262316 PLXNC1O60486 1568 aa23.17■■□□□ 1.3
RHBDF1-201ENST00000262316 ARID4BQ4LE39 1312 aaPredicted RBP23.16■■□□□ 1.3
RHBDF1-201ENST00000262316 ADGRF5Q8IZF2 1346 aa23.16■■□□□ 1.3
RHBDF1-201ENST00000262316 UGGT1Q9NYU2 1555 aa23.15■■□□□ 1.3
RHBDF1-201ENST00000262316 CD109Q6YHK3 1445 aa23.15■■□□□ 1.3
RHBDF1-201ENST00000262316 CFAP65Q6ZU64 1925 aaKnown RBP23.14■■□□□ 1.29
RHBDF1-201ENST00000262316 ZFYVE16Q7Z3T8 1539 aa23.14■■□□□ 1.29
RHBDF1-201ENST00000262316 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.29
RHBDF1-201ENST00000262316 IQGAP3Q86VI3 1631 aa23.14■■□□□ 1.29
RHBDF1-201ENST00000262316 MYBBP1AQ9BQG0 1328 aaKnown RBP23.13■■□□□ 1.29
RHBDF1-201ENST00000262316 ATP10AO60312 1499 aa23.12■■□□□ 1.29
RHBDF1-201ENST00000262316 ATP7AQ04656 1500 aa23.11■■□□□ 1.29
RHBDF1-201ENST00000262316 TMEM132EQ6IEE7 984 aa23.1■■□□□ 1.29
RHBDF1-201ENST00000262316 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
RHBDF1-201ENST00000262316 KTN1Q86UP2 1357 aaKnown RBP23.1■■□□□ 1.29
RHBDF1-201ENST00000262316 RTEL1-TNFRSF6BF6WH68 1400 aa23.09■■□□□ 1.29
RHBDF1-201ENST00000262316 RALBP1Q15311 655 aa23.09■■□□□ 1.29
RHBDF1-201ENST00000262316 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.29
RHBDF1-201ENST00000262316 TRAK1Q9UPV9 953 aa23.07■■□□□ 1.28
RHBDF1-201ENST00000262316 E9PCH4 1651 aa23.07■■□□□ 1.28
RHBDF1-201ENST00000262316 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
RHBDF1-201ENST00000262316 KNSTRNQ9Y448 316 aa23.04■■□□□ 1.28
RHBDF1-201ENST00000262316 GPRASP1Q5JY77 1395 aa23.04■■□□□ 1.28
RHBDF1-201ENST00000262316 NLRP13Q86W25 1043 aa23.04■■□□□ 1.28
RHBDF1-201ENST00000262316 CDCA7LQ96GN5 454 aa23.04■■□□□ 1.28
RHBDF1-201ENST00000262316 MAGI2Q86UL8 1455 aa23.04■■□□□ 1.28
RHBDF1-201ENST00000262316 POLR1AO95602 1720 aaPredicted RBP23.04■■□□□ 1.28
RHBDF1-201ENST00000262316 NUDCQ9Y266 331 aa23.01■■□□□ 1.27
RHBDF1-201ENST00000262316 TNNT2P45379 298 aaPredicted RBP23.01■■□□□ 1.27
RHBDF1-201ENST00000262316 ABCA9Q8IUA7 1624 aa23■■□□□ 1.27
RHBDF1-201ENST00000262316 CLTCL1P53675 1640 aa22.99■■□□□ 1.27
RHBDF1-201ENST00000262316 MLECQ14165 292 aa22.98■■□□□ 1.27
RHBDF1-201ENST00000262316 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
RHBDF1-201ENST00000262316 COL17A1Q9UMD9 1497 aaPredicted RBP22.97■■□□□ 1.27
RHBDF1-201ENST00000262316 RBM19Q9Y4C8 960 aaKnown RBP22.97■■□□□ 1.27
RHBDF1-201ENST00000262316 PPP4R2Q9NY27 417 aa22.96■■□□□ 1.27
RHBDF1-201ENST00000262316 BRD4O60885 1362 aaPredicted RBP22.96■■□□□ 1.27
RHBDF1-201ENST00000262316 PTPRTO14522 1441 aa22.95■■□□□ 1.27
RHBDF1-201ENST00000262316 STK26Q9P289 416 aa22.95■■□□□ 1.26
RHBDF1-201ENST00000262316 ADAMTS8Q9UP79 889 aa22.95■■□□□ 1.26
RHBDF1-201ENST00000262316 PRDM15P57071 1507 aaPredicted RBP22.94■■□□□ 1.26
RHBDF1-201ENST00000262316 PARD3Q8TEW0 1356 aa22.94■■□□□ 1.26
RHBDF1-201ENST00000262316 ZNF518AQ6AHZ1 1483 aa22.94■■□□□ 1.26
RHBDF1-201ENST00000262316 NOS1P29475 1434 aa22.93■■□□□ 1.26
RHBDF1-201ENST00000262316 CCDC146Q8IYE0 955 aa22.92■■□□□ 1.26
RHBDF1-201ENST00000262316 INO80Q9ULG1 1556 aaPredicted RBP22.92■■□□□ 1.26
RHBDF1-201ENST00000262316 TRPM2O94759 1503 aa22.92■■□□□ 1.26
RHBDF1-201ENST00000262316 ARAP3Q8WWN8 1544 aa22.92■■□□□ 1.26
RHBDF1-201ENST00000262316 KIDINS220Q9ULH0 1771 aa22.91■■□□□ 1.26
RHBDF1-201ENST00000262316 PLIN1O60240 522 aa22.9■■□□□ 1.26
RHBDF1-201ENST00000262316 PPP2R1AP30153 589 aa22.9■■□□□ 1.26
RHBDF1-201ENST00000262316 FBXO31Q5XUX0 539 aaPredicted RBP22.9■■□□□ 1.26
RHBDF1-201ENST00000262316 POGZQ7Z3K3 1410 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms