RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 GOLGA6L6A8MZA4 724 aa15.34■□□□□ 0.05
SPG11-201ENST00000261866 CREBRFQ8IUR6 639 aa15.34■□□□□ 0.05
SPG11-201ENST00000261866 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
SPG11-201ENST00000261866 FOXD4L5Q5VV16 416 aaPredicted RBP15.33■□□□□ 0.05
SPG11-201ENST00000261866 FOXD4L4Q8WXT5 416 aaPredicted RBP15.33■□□□□ 0.05
SPG11-201ENST00000261866 EIF3AQ14152 1382 aaKnown RBP15.33■□□□□ 0.05
SPG11-201ENST00000261866 FMN1Q68DA7 1419 aa15.33■□□□□ 0.04
SPG11-201ENST00000261866 NUTM2GQ5VZR2 741 aa15.32■□□□□ 0.04
SPG11-201ENST00000261866 VPS53Q5VIR6 699 aa15.32■□□□□ 0.04
SPG11-201ENST00000261866 PHF23Q9BUL5 403 aaPredicted RBP15.32■□□□□ 0.04
SPG11-201ENST00000261866 RAD21O60216 631 aa15.31■□□□□ 0.04
SPG11-201ENST00000261866 FAM69CQ0P6D2 419 aa15.31■□□□□ 0.04
SPG11-201ENST00000261866 EIF2S2P20042 333 aaKnown RBP15.31■□□□□ 0.04
SPG11-201ENST00000261866 TCERG1O14776 1098 aaKnown RBP15.3■□□□□ 0.04
SPG11-201ENST00000261866 CALD1Q05682 793 aaKnown RBP15.3■□□□□ 0.04
SPG11-201ENST00000261866 FBXW7Q969H0 707 aa15.29■□□□□ 0.04
SPG11-201ENST00000261866 NOC3LQ8WTT2 800 aaKnown RBP15.29■□□□□ 0.04
SPG11-201ENST00000261866 PANK3Q9H999 370 aa15.29■□□□□ 0.04
SPG11-201ENST00000261866 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
SPG11-201ENST00000261866 ST20-MTHFSA0A0A6YYL1 179 aa15.27■□□□□ 0.04
SPG11-201ENST00000261866 RWDD1Q9H446 243 aaPredicted RBP15.27■□□□□ 0.04
SPG11-201ENST00000261866 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
SPG11-201ENST00000261866 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.03
SPG11-201ENST00000261866 RALBP1Q15311 655 aa15.27■□□□□ 0.03
SPG11-201ENST00000261866 RAPGEF2Q9Y4G8 1499 aa15.26■□□□□ 0.03
SPG11-201ENST00000261866 COG3Q96JB2 828 aa15.25■□□□□ 0.03
SPG11-201ENST00000261866 PLIN1O60240 522 aa15.25■□□□□ 0.03
SPG11-201ENST00000261866 PSME1Q06323 249 aa15.25■□□□□ 0.03
SPG11-201ENST00000261866 RASSF8Q8NHQ8 419 aa15.25■□□□□ 0.03
SPG11-201ENST00000261866 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
SPG11-201ENST00000261866 CCDC18Q5T9S5 1454 aa15.24■□□□□ 0.03
SPG11-201ENST00000261866 FOXD4L6Q3SYB3 417 aaPredicted RBP15.23■□□□□ 0.03
SPG11-201ENST00000261866 FOXD4L3Q6VB84 417 aaPredicted RBP15.23■□□□□ 0.03
SPG11-201ENST00000261866 RILPL2Q969X0 211 aa15.23■□□□□ 0.03
SPG11-201ENST00000261866 PTPRGP23470 1445 aa15.23■□□□□ 0.03
SPG11-201ENST00000261866 CENPJQ9HC77 1338 aaPredicted RBP15.22■□□□□ 0.03
SPG11-201ENST00000261866 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
SPG11-201ENST00000261866 CCER2I3L3R5 266 aa15.21■□□□□ 0.03
SPG11-201ENST00000261866 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.03
SPG11-201ENST00000261866 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
SPG11-201ENST00000261866 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.02
SPG11-201ENST00000261866 CCDC144AA2RUR9 1427 aa15.2■□□□□ 0.02
SPG11-201ENST00000261866 NRDCO43847 1150 aa15.2■□□□□ 0.02
SPG11-201ENST00000261866 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
SPG11-201ENST00000261866 TTC5Q8N0Z6 440 aa15.19■□□□□ 0.02
SPG11-201ENST00000261866 MARCH6O60337 910 aa15.18■□□□□ 0.02
SPG11-201ENST00000261866 TEFQ10587 303 aa15.18■□□□□ 0.02
SPG11-201ENST00000261866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.18■□□□□ 0.02
SPG11-201ENST00000261866 HMMRO75330 724 aa15.17■□□□□ 0.02
SPG11-201ENST00000261866 ZNF644Q9H582 1327 aaPredicted RBP15.17■□□□□ 0.02
SPG11-201ENST00000261866 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
SPG11-201ENST00000261866 MSNP26038 577 aaKnown RBP15.17■□□□□ 0.02
SPG11-201ENST00000261866 PMFBP1Q8TBY8 1022 aa15.16■□□□□ 0.02
SPG11-201ENST00000261866 KIAA2012Q0VF49 1180 aa15.16■□□□□ 0.02
SPG11-201ENST00000261866 HMOX1P09601 288 aa15.16■□□□□ 0.02
SPG11-201ENST00000261866 A0A0U1RQG5 324 aaPredicted RBP15.16■□□□□ 0.02
SPG11-201ENST00000261866 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
SPG11-201ENST00000261866 TIMELESSQ9UNS1 1208 aa15.15■□□□□ 0.02
SPG11-201ENST00000261866 FAM177BA6PVY3 158 aa15.15■□□□□ 0.02
SPG11-201ENST00000261866 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
SPG11-201ENST00000261866 ANKRD45Q5TZF3 282 aa15.15■□□□□ 0.02
SPG11-201ENST00000261866 RBM19Q9Y4C8 960 aaKnown RBP15.15■□□□□ 0.02
SPG11-201ENST00000261866 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
SPG11-201ENST00000261866 EVC2Q86UK5 1308 aa15.15■□□□□ 0.02
SPG11-201ENST00000261866 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
SPG11-201ENST00000261866 TMEM132EQ6IEE7 984 aa15.14■□□□□ 0.01
SPG11-201ENST00000261866 CHAF1AQ13111 956 aaPredicted RBP15.14■□□□□ 0.01
SPG11-201ENST00000261866 AIMP1Q12904 312 aaKnown RBP15.13■□□□□ 0.01
SPG11-201ENST00000261866 ATF3P18847 181 aa15.13■□□□□ 0.01
SPG11-201ENST00000261866 KRI1Q8N9T8 703 aaKnown RBP15.12■□□□□ 0.01
SPG11-201ENST00000261866 CABP2Q9NPB3 220 aa15.12■□□□□ 0.01
SPG11-201ENST00000261866 NLRP13Q86W25 1043 aa15.12■□□□□ 0.01
SPG11-201ENST00000261866 CGNL1Q0VF96 1302 aa15.12■□□□□ 0.01
SPG11-201ENST00000261866 PPP1R1BQ9UD71 204 aaPredicted RBP15.11■□□□□ 0.01
SPG11-201ENST00000261866 C9orf78Q9NZ63 289 aaPredicted RBP15.11■□□□□ 0.01
SPG11-201ENST00000261866 SLC4A3P48751 1232 aa15.11■□□□□ 0.01
SPG11-201ENST00000261866 PES1O00541 588 aaKnown RBP15.11■□□□□ 0.01
SPG11-201ENST00000261866 RSPH4AQ5TD94 716 aa15.11■□□□□ 0.01
SPG11-201ENST00000261866 L1TD1Q5T7N2 865 aaKnown RBP15.11■□□□□ 0.01
SPG11-201ENST00000261866 NUTM2BA6NNL0 878 aaPredicted RBP15.1■□□□□ 0.01
SPG11-201ENST00000261866 NUTM2EB1AL46 878 aaPredicted RBP15.1■□□□□ 0.01
SPG11-201ENST00000261866 NUTM2AQ8IVF1 878 aaPredicted RBP15.1■□□□□ 0.01
SPG11-201ENST00000261866 TRIM34Q9BYJ4 488 aa15.1■□□□□ 0.01
SPG11-201ENST00000261866 PATL2C9JE40 543 aaKnown RBP15.1■□□□□ 0.01
SPG11-201ENST00000261866 FYB1O15117 783 aa15.1■□□□□ 0.01
SPG11-201ENST00000261866 KDM4AO75164 1064 aa15.1■□□□□ 0.01
SPG11-201ENST00000261866 VPS37DQ86XT2 251 aa15.1■□□□□ 0.01
SPG11-201ENST00000261866 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.018e-7■■■■□ 22.4
SPG11-201ENST00000261866 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
SPG11-201ENST00000261866 APPP05067 770 aa15.1■□□□□ 0.01
SPG11-201ENST00000261866 FOSBP53539 338 aa15.1■□□□□ 0.01
SPG11-201ENST00000261866 NLRP2Q9NX02 1062 aa15.09■□□□□ 0.01
SPG11-201ENST00000261866 COG6Q9Y2V7 657 aa15.09■□□□□ 0.01
SPG11-201ENST00000261866 APAF1O14727 1248 aa15.09■□□□□ 0.01
SPG11-201ENST00000261866 GBP4Q96PP9 640 aa15.09■□□□□ 0.01
SPG11-201ENST00000261866 GGNBP2Q9H3C7 697 aa15.08■□□□□ 0
SPG11-201ENST00000261866 RIPK4P57078 832 aa15.08■□□□□ 0
SPG11-201ENST00000261866 CFAP44Q96MT7 982 aa15.08■□□□□ 0
SPG11-201ENST00000261866 KIF15Q9NS87 1388 aa15.08■□□□□ 0
SPG11-201ENST00000261866 STRN4Q9NRL3 753 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms