RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 KIAA1107Q9UPP5 1409 aa21.07■□□□□ 0.96
LMNB1-201ENST00000261366 CRBNQ96SW2 442 aa21.07■□□□□ 0.96
LMNB1-201ENST00000261366 POLR1AO95602 1720 aaPredicted RBP21.06■□□□□ 0.96
LMNB1-201ENST00000261366 RGL3Q3MIN7 710 aa21.06■□□□□ 0.96
LMNB1-201ENST00000261366 NUP155O75694 1391 aa21.05■□□□□ 0.96
LMNB1-201ENST00000261366 KIF14Q15058 1648 aa21.05■□□□□ 0.96
LMNB1-201ENST00000261366 LRPPRCP42704 1394 aaKnown RBP21.05■□□□□ 0.96
LMNB1-201ENST00000261366 PTPRGP23470 1445 aa21.04■□□□□ 0.96
LMNB1-201ENST00000261366 ATP10BO94823 1461 aa21.04■□□□□ 0.96
LMNB1-201ENST00000261366 RALBP1Q15311 655 aa21.04■□□□□ 0.96
LMNB1-201ENST00000261366 BRPF3Q9ULD4 1205 aa21.04■□□□□ 0.96
LMNB1-201ENST00000261366 BRD4O60885 1362 aaPredicted RBP21.04■□□□□ 0.96
LMNB1-201ENST00000261366 DNMT1P26358 1616 aaKnown RBP21.03■□□□□ 0.96
LMNB1-201ENST00000261366 CAMSAP2Q08AD1 1489 aa21.03■□□□□ 0.96
LMNB1-201ENST00000261366 C20orf194Q5TEA3 1177 aa21.03■□□□□ 0.96
LMNB1-201ENST00000261366 ROCK2O75116 1388 aaKnown RBP21.02■□□□□ 0.96
LMNB1-201ENST00000261366 MBD5Q9P267 1494 aa21.02■□□□□ 0.96
LMNB1-201ENST00000261366 KDM5CP41229 1560 aa21.02■□□□□ 0.95
LMNB1-201ENST00000261366 NLRP13Q86W25 1043 aa21.01■□□□□ 0.95
LMNB1-201ENST00000261366 ARID4BQ4LE39 1312 aaPredicted RBP21■□□□□ 0.95
LMNB1-201ENST00000261366 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
LMNB1-201ENST00000261366 DAXXQ9UER7 740 aaPredicted RBP20.99■□□□□ 0.95
LMNB1-201ENST00000261366 ABCA8O94911 1581 aa20.98■□□□□ 0.95
LMNB1-201ENST00000261366 KTN1Q86UP2 1357 aaKnown RBP20.97■□□□□ 0.95
LMNB1-201ENST00000261366 NBPF1Q3BBV0 1214 aa20.97■□□□□ 0.95
LMNB1-201ENST00000261366 MS4A1P11836 297 aa20.96■□□□□ 0.95
LMNB1-201ENST00000261366 ANKRD50Q9ULJ7 1429 aa20.95■□□□□ 0.95
LMNB1-201ENST00000261366 HNRNPMP52272 730 aaKnown RBP eCLIP20.95■□□□□ 0.94
LMNB1-201ENST00000261366 USP35Q9P2H5 1018 aa20.95■□□□□ 0.94
LMNB1-201ENST00000261366 ANKRD30AQ9BXX3 1397 aa20.94■□□□□ 0.94
LMNB1-201ENST00000261366 NFKBIBQ15653 356 aa20.94■□□□□ 0.94
LMNB1-201ENST00000261366 RGS3P49796 1198 aa20.93■□□□□ 0.94
LMNB1-201ENST00000261366 RALGAPBQ86X10 1494 aa20.92■□□□□ 0.94
LMNB1-201ENST00000261366 PDE3BQ13370 1112 aa20.91■□□□□ 0.94
LMNB1-201ENST00000261366 TSPY4P0CV99 314 aa20.91■□□□□ 0.94
LMNB1-201ENST00000261366 TSPY10P0CW01 314 aa20.91■□□□□ 0.94
LMNB1-201ENST00000261366 GSE1Q14687 1217 aa20.9■□□□□ 0.94
LMNB1-201ENST00000261366 DDRGK1Q96HY6 314 aa20.9■□□□□ 0.94
LMNB1-201ENST00000261366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.9■□□□□ 0.945e-7■■■□□ 19
LMNB1-201ENST00000261366 PANK3Q9H999 370 aa20.9■□□□□ 0.94
LMNB1-201ENST00000261366 ITSN2Q9NZM3 1697 aa20.89■□□□□ 0.94
LMNB1-201ENST00000261366 ABCC10Q5T3U5 1492 aa20.89■□□□□ 0.94
LMNB1-201ENST00000261366 FRAT1Q92837 279 aaPredicted RBP20.89■□□□□ 0.94
LMNB1-201ENST00000261366 ADCY10Q96PN6 1610 aa20.88■□□□□ 0.93
LMNB1-201ENST00000261366 CHD1O14646 1710 aa20.87■□□□□ 0.93
LMNB1-201ENST00000261366 EIF5BO60841 1220 aaKnown RBP20.87■□□□□ 0.93
LMNB1-201ENST00000261366 WASHC2CQ9Y4E1 1318 aa20.86■□□□□ 0.93
LMNB1-201ENST00000261366 PER1O15534 1290 aaPredicted RBP20.86■□□□□ 0.93
LMNB1-201ENST00000261366 ADAMTS8Q9UP79 889 aa20.86■□□□□ 0.93
LMNB1-201ENST00000261366 PARD3Q8TEW0 1356 aa20.85■□□□□ 0.93
LMNB1-201ENST00000261366 UHRF1BP1Q6BDS2 1440 aa20.84■□□□□ 0.93
LMNB1-201ENST00000261366 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.93
LMNB1-201ENST00000261366 C9orf84Q5VXU9 1444 aa20.83■□□□□ 0.92
LMNB1-201ENST00000261366 FRAT2O75474 233 aaPredicted RBP20.82■□□□□ 0.92
LMNB1-201ENST00000261366 CDC42BPAQ5VT25 1732 aa20.82■□□□□ 0.92
LMNB1-201ENST00000261366 ADGRL2O95490 1459 aa20.81■□□□□ 0.92
LMNB1-201ENST00000261366 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
LMNB1-201ENST00000261366 CCDC146Q8IYE0 955 aa20.77■□□□□ 0.92
LMNB1-201ENST00000261366 WDR43Q15061 677 aaKnown RBP eCLIP20.76■□□□□ 0.916e-11■■■□□ 18.3
LMNB1-201ENST00000261366 FAM161AQ3B820 660 aa20.76■□□□□ 0.91
LMNB1-201ENST00000261366 C8orf34Q49A92 452 aa20.76■□□□□ 0.91
LMNB1-201ENST00000261366 KDM2BQ8NHM5 1336 aa20.74■□□□□ 0.91
LMNB1-201ENST00000261366 ADGBQ8N7X0 1667 aa20.74■□□□□ 0.91
LMNB1-201ENST00000261366 CENPQQ7L2Z9 268 aaPredicted RBP20.74■□□□□ 0.91
LMNB1-201ENST00000261366 ARXQ96QS3 562 aa20.73■□□□□ 0.91
LMNB1-201ENST00000261366 CROCC2H7BZ55 1655 aa20.73■□□□□ 0.91
LMNB1-201ENST00000261366 PLEKHH1Q9ULM0 1364 aa20.73■□□□□ 0.91
LMNB1-201ENST00000261366 TESK2Q96S53 571 aa20.72■□□□□ 0.91
LMNB1-201ENST00000261366 CCDC144AA2RUR9 1427 aa20.72■□□□□ 0.91
LMNB1-201ENST00000261366 DUSP27Q5VZP5 1158 aa20.71■□□□□ 0.91
LMNB1-201ENST00000261366 ARHGEF12Q9NZN5 1544 aa20.71■□□□□ 0.91
LMNB1-201ENST00000261366 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
LMNB1-201ENST00000261366 TMF1P82094 1093 aa20.7■□□□□ 0.9
LMNB1-201ENST00000261366 SHANK2Q9UPX8 1470 aa20.7■□□□□ 0.9
LMNB1-201ENST00000261366 PRAG1Q86YV5 1406 aa20.69■□□□□ 0.9
LMNB1-201ENST00000261366 BCAR3O75815 825 aa20.68■□□□□ 0.9
LMNB1-201ENST00000261366 GOLGA2Q08379 1002 aa20.68■□□□□ 0.9
LMNB1-201ENST00000261366 KNSTRNQ9Y448 316 aa20.68■□□□□ 0.9
LMNB1-201ENST00000261366 BLMP54132 1417 aaPredicted RBP20.68■□□□□ 0.9
LMNB1-201ENST00000261366 ARHGAP5Q13017 1502 aa20.68■□□□□ 0.9
LMNB1-201ENST00000261366 E9PCH4 1651 aa20.68■□□□□ 0.9
LMNB1-201ENST00000261366 SAMD9LQ8IVG5 1584 aa20.68■□□□□ 0.9
LMNB1-201ENST00000261366 RSPH4AQ5TD94 716 aa20.68■□□□□ 0.9
LMNB1-201ENST00000261366 SLKQ9H2G2 1235 aaPredicted RBP20.67■□□□□ 0.9
LMNB1-201ENST00000261366 CCDC141Q6ZP82 1450 aa20.67■□□□□ 0.9
LMNB1-201ENST00000261366 ABCC2Q92887 1545 aa20.67■□□□□ 0.9
LMNB1-201ENST00000261366 SPINK5Q9NQ38 1064 aaPredicted RBP20.66■□□□□ 0.9
LMNB1-201ENST00000261366 PPP2R1AP30153 589 aa20.66■□□□□ 0.9
LMNB1-201ENST00000261366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.66■□□□□ 0.91e-6■□□□□ 10.8
LMNB1-201ENST00000261366 CDC42BPBQ9Y5S2 1711 aa20.65■□□□□ 0.9
LMNB1-201ENST00000261366 TTC37Q6PGP7 1564 aa20.65■□□□□ 0.9
LMNB1-201ENST00000261366 ERBINQ96RT1 1412 aa20.65■□□□□ 0.9
LMNB1-201ENST00000261366 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.64■□□□□ 0.9
LMNB1-201ENST00000261366 SYCP2Q9BX26 1530 aa20.64■□□□□ 0.89
LMNB1-201ENST00000261366 APAF1O14727 1248 aa20.63■□□□□ 0.89
LMNB1-201ENST00000261366 ZMYM4Q5VZL5 1548 aa20.62■□□□□ 0.89
LMNB1-201ENST00000261366 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
LMNB1-201ENST00000261366 PREX2Q70Z35 1606 aa20.62■□□□□ 0.89
LMNB1-201ENST00000261366 KDM5DQ9BY66 1539 aa20.62■□□□□ 0.89
LMNB1-201ENST00000261366 SEC24BO95487 1268 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms