RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 ISY1Q9ULR0 285 aaKnown RBP18.49■□□□□ 0.55
C12orf49-201ENST00000261318 HDAC5Q9UQL6 1122 aa18.49■□□□□ 0.55
C12orf49-201ENST00000261318 DDX49Q9Y6V7 483 aaKnown RBP18.48■□□□□ 0.55
C12orf49-201ENST00000261318 SLC4A3P48751 1232 aa18.47■□□□□ 0.55
C12orf49-201ENST00000261318 DHX57Q6P158 1386 aaKnown RBP18.47■□□□□ 0.55
C12orf49-201ENST00000261318 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
C12orf49-201ENST00000261318 SLC4A10Q6U841 1118 aa18.46■□□□□ 0.55
C12orf49-201ENST00000261318 TERF2IPQ9NYB0 399 aa18.46■□□□□ 0.55
C12orf49-201ENST00000261318 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
C12orf49-201ENST00000261318 FOXD4L5Q5VV16 416 aaPredicted RBP18.46■□□□□ 0.55
C12orf49-201ENST00000261318 FOXD4L4Q8WXT5 416 aaPredicted RBP18.46■□□□□ 0.55
C12orf49-201ENST00000261318 GGT6Q6P531 493 aa18.45■□□□□ 0.54
C12orf49-201ENST00000261318 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
C12orf49-201ENST00000261318 KIF3AQ9Y496 699 aa18.44■□□□□ 0.54
C12orf49-201ENST00000261318 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
C12orf49-201ENST00000261318 CCDC18Q5T9S5 1454 aa18.44■□□□□ 0.54
C12orf49-201ENST00000261318 PLIN1O60240 522 aa18.43■□□□□ 0.54
C12orf49-201ENST00000261318 EXOC6Q8TAG9 804 aa18.43■□□□□ 0.54
C12orf49-201ENST00000261318 CRBNQ96SW2 442 aa18.43■□□□□ 0.54
C12orf49-201ENST00000261318 VSIG10Q8N0Z9 540 aa18.43■□□□□ 0.54
C12orf49-201ENST00000261318 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
C12orf49-201ENST00000261318 ATP6V1DQ9Y5K8 247 aa18.42■□□□□ 0.54
C12orf49-201ENST00000261318 PRKRIP1Q9H875 184 aaPredicted RBP18.42■□□□□ 0.54
C12orf49-201ENST00000261318 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
C12orf49-201ENST00000261318 CHMP3Q9Y3E7 222 aa18.41■□□□□ 0.54
C12orf49-201ENST00000261318 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
C12orf49-201ENST00000261318 TPM3P06753 285 aa18.41■□□□□ 0.54
C12orf49-201ENST00000261318 E9PSI1 815 aa18.4■□□□□ 0.54
C12orf49-201ENST00000261318 GOLGA6L19H0YKK7 550 aa18.4■□□□□ 0.54
C12orf49-201ENST00000261318 MLECQ14165 292 aa18.4■□□□□ 0.54
C12orf49-201ENST00000261318 ANKRD45Q5TZF3 282 aa18.4■□□□□ 0.54
C12orf49-201ENST00000261318 SF3A1Q15459 793 aaKnown RBP18.39■□□□□ 0.54
C12orf49-201ENST00000261318 CGNL1Q0VF96 1302 aa18.39■□□□□ 0.53
C12orf49-201ENST00000261318 CREBRFQ8IUR6 639 aa18.38■□□□□ 0.53
C12orf49-201ENST00000261318 H3BQV1 296 aa18.38■□□□□ 0.53
C12orf49-201ENST00000261318 IFFO2Q5TF58 517 aa18.38■□□□□ 0.53
C12orf49-201ENST00000261318 PANK3Q9H999 370 aa18.37■□□□□ 0.53
C12orf49-201ENST00000261318 RAPGEF2Q9Y4G8 1499 aa18.37■□□□□ 0.53
C12orf49-201ENST00000261318 RASSF8Q8NHQ8 419 aa18.37■□□□□ 0.53
C12orf49-201ENST00000261318 ST20-MTHFSA0A0A6YYL1 179 aa18.37■□□□□ 0.53
C12orf49-201ENST00000261318 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
C12orf49-201ENST00000261318 TAF7LQ5H9L4 462 aa18.36■□□□□ 0.53
C12orf49-201ENST00000261318 ZKSCAN2Q63HK3 967 aa18.36■□□□□ 0.53
C12orf49-201ENST00000261318 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
C12orf49-201ENST00000261318 RILPL2Q969X0 211 aa18.35■□□□□ 0.53
C12orf49-201ENST00000261318 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
C12orf49-201ENST00000261318 USP47Q96K76 1375 aa18.35■□□□□ 0.53
C12orf49-201ENST00000261318 BCL2L13Q9BXK5 485 aa18.35■□□□□ 0.53
C12orf49-201ENST00000261318 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
C12orf49-201ENST00000261318 SETQ01105 290 aaPredicted RBP18.34■□□□□ 0.53
C12orf49-201ENST00000261318 CCDC144AA2RUR9 1427 aa18.34■□□□□ 0.53
C12orf49-201ENST00000261318 BECN2A8MW95 431 aa18.34■□□□□ 0.53
C12orf49-201ENST00000261318 FOXD4L6Q3SYB3 417 aaPredicted RBP18.33■□□□□ 0.53
C12orf49-201ENST00000261318 FOXD4L3Q6VB84 417 aaPredicted RBP18.33■□□□□ 0.53
C12orf49-201ENST00000261318 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
C12orf49-201ENST00000261318 ZNF771Q7L3S4 317 aaPredicted RBP18.32■□□□□ 0.52
C12orf49-201ENST00000261318 FAM184AQ8NB25 1140 aa18.32■□□□□ 0.52
C12orf49-201ENST00000261318 GPS2Q13227 327 aa18.32■□□□□ 0.52
C12orf49-201ENST00000261318 COG6Q9Y2V7 657 aa18.32■□□□□ 0.52
C12orf49-201ENST00000261318 CHMP5Q9NZZ3 219 aa18.31■□□□□ 0.52
C12orf49-201ENST00000261318 REC8O95072 547 aa18.31■□□□□ 0.52
C12orf49-201ENST00000261318 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.31■□□□□ 0.52
C12orf49-201ENST00000261318 TSR1Q2NL82 804 aaKnown RBP18.31■□□□□ 0.52
C12orf49-201ENST00000261318 CHMP4CQ96CF2 233 aa18.31■□□□□ 0.52
C12orf49-201ENST00000261318 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
C12orf49-201ENST00000261318 HNRNPMP52272 730 aaKnown RBP eCLIP18.3■□□□□ 0.52
C12orf49-201ENST00000261318 TPD52L1Q16890 204 aaPredicted RBP18.3■□□□□ 0.52
C12orf49-201ENST00000261318 RSPH4AQ5TD94 716 aa18.3■□□□□ 0.52
C12orf49-201ENST00000261318 CCAR2Q8N163 923 aaKnown RBP18.3■□□□□ 0.52
C12orf49-201ENST00000261318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
C12orf49-201ENST00000261318 FAM13BQ9NYF5 915 aa18.29■□□□□ 0.52
C12orf49-201ENST00000261318 DDX19BQ9UMR2 479 aa18.28■□□□□ 0.52
C12orf49-201ENST00000261318 PES1O00541 588 aaKnown RBP18.28■□□□□ 0.52
C12orf49-201ENST00000261318 ZNF592Q92610 1267 aa18.28■□□□□ 0.52
C12orf49-201ENST00000261318 UACAQ9BZF9 1416 aa18.27■□□□□ 0.52
C12orf49-201ENST00000261318 KIF3BO15066 747 aa18.27■□□□□ 0.52
C12orf49-201ENST00000261318 FAM43AQ8N2R8 423 aa18.27■□□□□ 0.52
C12orf49-201ENST00000261318 TPM1P09493 284 aa18.27■□□□□ 0.52
C12orf49-201ENST00000261318 AMPHP49418 695 aa18.26■□□□□ 0.51
C12orf49-201ENST00000261318 CCDC70Q6NSX1 233 aa18.26■□□□□ 0.51
C12orf49-201ENST00000261318 CEP89Q96ST8 783 aa18.24■□□□□ 0.51
C12orf49-201ENST00000261318 TEX35Q5T0J7 233 aa18.24■□□□□ 0.51
C12orf49-201ENST00000261318 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
C12orf49-201ENST00000261318 TRAK1Q9UPV9 953 aa18.24■□□□□ 0.51
C12orf49-201ENST00000261318 DIAPH3Q9NSV4 1193 aa18.23■□□□□ 0.51
C12orf49-201ENST00000261318 NFKBIBQ15653 356 aa18.23■□□□□ 0.51
C12orf49-201ENST00000261318 NGEFQ8N5V2 710 aa18.23■□□□□ 0.51
C12orf49-201ENST00000261318 MCTP1Q6DN14 999 aa18.23■□□□□ 0.51
C12orf49-201ENST00000261318 RUFY2Q8WXA3 655 aa18.22■□□□□ 0.51
C12orf49-201ENST00000261318 ELL2O00472 640 aaPredicted RBP18.22■□□□□ 0.51
C12orf49-201ENST00000261318 NUCB2P80303 420 aa18.22■□□□□ 0.51
C12orf49-201ENST00000261318 PDE4CQ08493 712 aa18.22■□□□□ 0.51
C12orf49-201ENST00000261318 APAF1O14727 1248 aa18.22■□□□□ 0.51
C12orf49-201ENST00000261318 ROCK1Q13464 1354 aa18.21■□□□□ 0.51
C12orf49-201ENST00000261318 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.51
C12orf49-201ENST00000261318 TPM2P07951 284 aa18.21■□□□□ 0.51
C12orf49-201ENST00000261318 DZIP1LQ8IYY4 767 aaKnown RBP18.21■□□□□ 0.5
C12orf49-201ENST00000261318 NGDNQ8NEJ9 315 aaKnown RBP18.21■□□□□ 0.5
C12orf49-201ENST00000261318 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
C12orf49-201ENST00000261318 ZKSCAN1P17029 563 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms