RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 ZNF142P52746 1687 aaPredicted RBP26.57■■□□□ 1.84
CGREF1-201ENST00000260595 KDM5DQ9BY66 1539 aa26.56■■□□□ 1.84
CGREF1-201ENST00000260595 CEP170BQ9Y4F5 1589 aaPredicted RBP26.56■■□□□ 1.84
CGREF1-201ENST00000260595 FBXO31Q5XUX0 539 aaPredicted RBP26.56■■□□□ 1.84
CGREF1-201ENST00000260595 WASHC2CQ9Y4E1 1318 aa26.56■■□□□ 1.84
CGREF1-201ENST00000260595 NCKAP5LQ9HCH0 1330 aa26.55■■□□□ 1.84
CGREF1-201ENST00000260595 APLP2Q06481 763 aa26.54■■□□□ 1.84
CGREF1-201ENST00000260595 PLA2R1Q13018 1463 aa26.54■■□□□ 1.84
CGREF1-201ENST00000260595 PZPP20742 1482 aa26.53■■□□□ 1.84
CGREF1-201ENST00000260595 A2ML1A8K2U0 1454 aa26.51■■□□□ 1.83
CGREF1-201ENST00000260595 PKD2Q13563 968 aa26.51■■□□□ 1.83
CGREF1-201ENST00000260595 LTBP4Q8N2S1 1624 aa26.5■■□□□ 1.83
CGREF1-201ENST00000260595 TCOF1Q13428 1488 aaKnown RBP26.5■■□□□ 1.83
CGREF1-201ENST00000260595 TNRQ92752 1358 aa26.5■■□□□ 1.83
CGREF1-201ENST00000260595 ABCC5O15440 1437 aa26.48■■□□□ 1.83
CGREF1-201ENST00000260595 RNF17Q9BXT8 1623 aaKnown RBP26.47■■□□□ 1.83
CGREF1-201ENST00000260595 DNMT1P26358 1616 aaKnown RBP26.47■■□□□ 1.83
CGREF1-201ENST00000260595 PTPN23Q9H3S7 1636 aa26.44■■□□□ 1.82
CGREF1-201ENST00000260595 EIF2AK4Q9P2K8 1649 aaKnown RBP26.43■■□□□ 1.82
CGREF1-201ENST00000260595 FGD6Q6ZV73 1430 aa26.43■■□□□ 1.82
CGREF1-201ENST00000260595 ABCC3O15438 1527 aa26.43■■□□□ 1.82
CGREF1-201ENST00000260595 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
CGREF1-201ENST00000260595 DUOX2Q9NRD8 1548 aa26.42■■□□□ 1.82
CGREF1-201ENST00000260595 MROH1Q8NDA8 1641 aa26.42■■□□□ 1.82
CGREF1-201ENST00000260595 KIF15Q9NS87 1388 aa26.4■■□□□ 1.82
CGREF1-201ENST00000260595 ZNF335Q9H4Z2 1342 aaPredicted RBP26.39■■□□□ 1.82
CGREF1-201ENST00000260595 DAPK1P53355 1430 aa26.39■■□□□ 1.82
CGREF1-201ENST00000260595 RRP7BPQ9NSQ0 103 aa26.38■■□□□ 1.81
CGREF1-201ENST00000260595 NLRP1Q9C000 1473 aa26.37■■□□□ 1.81
CGREF1-201ENST00000260595 CROCC2H7BZ55 1655 aa26.37■■□□□ 1.81
CGREF1-201ENST00000260595 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
CGREF1-201ENST00000260595 ZC3H13Q5T200 1668 aaKnown RBP26.36■■□□□ 1.81
CGREF1-201ENST00000260595 SPATA31D1Q6ZQQ2 1576 aa26.34■■□□□ 1.81
CGREF1-201ENST00000260595 ERBINQ96RT1 1412 aa26.34■■□□□ 1.81
CGREF1-201ENST00000260595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.33■■□□□ 1.81
CGREF1-201ENST00000260595 THEMISQ8N1K5 641 aaPredicted RBP26.33■■□□□ 1.81
CGREF1-201ENST00000260595 ERVK-7P63135 1459 aa26.32■■□□□ 1.8
CGREF1-201ENST00000260595 NEURL4Q96JN8 1562 aa26.31■■□□□ 1.8
CGREF1-201ENST00000260595 UGGT1Q9NYU2 1555 aa26.31■■□□□ 1.8
CGREF1-201ENST00000260595 PRDM15P57071 1507 aaPredicted RBP26.29■■□□□ 1.8
CGREF1-201ENST00000260595 ANKLE2Q86XL3 938 aa26.29■■□□□ 1.8
CGREF1-201ENST00000260595 CHIC2Q9UKJ5 165 aa26.29■■□□□ 1.8
CGREF1-201ENST00000260595 CEP152O94986 1710 aa26.28■■□□□ 1.8
CGREF1-201ENST00000260595 ANKRD30AQ9BXX3 1397 aa26.27■■□□□ 1.8
CGREF1-201ENST00000260595 ARHGAP31Q2M1Z3 1444 aa26.27■■□□□ 1.8
CGREF1-201ENST00000260595 POLR1AO95602 1720 aaPredicted RBP26.25■■□□□ 1.79
CGREF1-201ENST00000260595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.24■■□□□ 1.79
CGREF1-201ENST00000260595 MED14O60244 1454 aa26.23■■□□□ 1.79
CGREF1-201ENST00000260595 DEPDC5O75140 1603 aa26.23■■□□□ 1.79
CGREF1-201ENST00000260595 ADGRL2O95490 1459 aa26.21■■□□□ 1.79
CGREF1-201ENST00000260595 NPHP4O75161 1426 aaPredicted RBP26.21■■□□□ 1.79
CGREF1-201ENST00000260595 FAM50AQ14320 339 aaKnown RBP26.2■■□□□ 1.78
CGREF1-201ENST00000260595 KANK1Q14678 1352 aa26.18■■□□□ 1.78
CGREF1-201ENST00000260595 VWDEQ8N2E2 1590 aa26.17■■□□□ 1.78
CGREF1-201ENST00000260595 LMTK2Q8IWU2 1503 aa26.17■■□□□ 1.78
CGREF1-201ENST00000260595 UBAP1LF5GYI3 381 aa26.16■■□□□ 1.78
CGREF1-201ENST00000260595 CFAP65Q6ZU64 1925 aaKnown RBP26.14■■□□□ 1.78
CGREF1-201ENST00000260595 UBR1Q8IWV7 1749 aa26.14■■□□□ 1.77
CGREF1-201ENST00000260595 CPS1P31327 1500 aa26.14■■□□□ 1.77
CGREF1-201ENST00000260595 ARHGAP23Q9P227 1491 aa26.11■■□□□ 1.77
CGREF1-201ENST00000260595 IQGAP1P46940 1657 aa26.1■■□□□ 1.77
CGREF1-201ENST00000260595 ANKRD50Q9ULJ7 1429 aa26.09■■□□□ 1.77
CGREF1-201ENST00000260595 LTKP29376 864 aa26.09■■□□□ 1.77
CGREF1-201ENST00000260595 SLIT1O75093 1534 aa26.09■■□□□ 1.77
CGREF1-201ENST00000260595 SCAF11Q99590 1463 aaKnown RBP26.07■■□□□ 1.76
CGREF1-201ENST00000260595 IDI1Q13907 227 aa26.06■■□□□ 1.76
CGREF1-201ENST00000260595 TXNDC2Q86VQ3 553 aa26.06■■□□□ 1.76
CGREF1-201ENST00000260595 NOS1P29475 1434 aa26.05■■□□□ 1.76
CGREF1-201ENST00000260595 EFCAB6Q5THR3 1501 aa26.04■■□□□ 1.76
CGREF1-201ENST00000260595 PIK3C2BO00750 1634 aa26.04■■□□□ 1.76
CGREF1-201ENST00000260595 TMEM2Q9UHN6 1383 aa26.03■■□□□ 1.76
CGREF1-201ENST00000260595 SYNMO15061 1565 aa26.02■■□□□ 1.76
CGREF1-201ENST00000260595 ROCK1Q13464 1354 aa26■■□□□ 1.75
CGREF1-201ENST00000260595 DISP3Q9P2K9 1392 aa25.99■■□□□ 1.75
CGREF1-201ENST00000260595 TOM1O60784 492 aa25.99■■□□□ 1.75
CGREF1-201ENST00000260595 STAG3Q9UJ98 1225 aa25.99■■□□□ 1.75
CGREF1-201ENST00000260595 EID1Q9Y6B2 187 aa25.99■■□□□ 1.75
CGREF1-201ENST00000260595 STRCP1A6NGW2 1772 aa25.99■■□□□ 1.75
CGREF1-201ENST00000260595 PPARGC1BQ86YN6 1023 aaKnown RBP25.98■■□□□ 1.75
CGREF1-201ENST00000260595 LRRC7Q96NW7 1537 aa25.97■■□□□ 1.75
CGREF1-201ENST00000260595 RPRD2Q5VT52 1461 aaKnown RBP25.97■■□□□ 1.75
CGREF1-201ENST00000260595 KDM5AP29375 1690 aaKnown RBP25.96■■□□□ 1.75
CGREF1-201ENST00000260595 SLC52A1Q9NWF4 448 aa25.96■■□□□ 1.75
CGREF1-201ENST00000260595 PIP4K2BP78356 416 aa25.94■■□□□ 1.74
CGREF1-201ENST00000260595 ALKQ9UM73 1620 aa25.94■■□□□ 1.74
CGREF1-201ENST00000260595 UNC13BO14795 1591 aa25.92■■□□□ 1.74
CGREF1-201ENST00000260595 TET3O43151 1660 aa25.91■■□□□ 1.74
CGREF1-201ENST00000260595 ADGRB3O60242 1522 aa25.91■■□□□ 1.74
CGREF1-201ENST00000260595 SCAF1Q9H7N4 1312 aaKnown RBP25.9■■□□□ 1.74
CGREF1-201ENST00000260595 HSPA1LP34931 641 aa25.9■■□□□ 1.74
CGREF1-201ENST00000260595 ITGAEP38570 1179 aa25.89■■□□□ 1.74
CGREF1-201ENST00000260595 ILDR2Q71H61 639 aa25.89■■□□□ 1.74
CGREF1-201ENST00000260595 GCC2Q8IWJ2 1684 aa25.84■■□□□ 1.73
CGREF1-201ENST00000260595 SLC26A8Q96RN1 970 aa25.83■■□□□ 1.73
CGREF1-201ENST00000260595 ZFYVE9O95405 1425 aa25.82■■□□□ 1.72
CGREF1-201ENST00000260595 NUP155O75694 1391 aa25.82■■□□□ 1.72
CGREF1-201ENST00000260595 IQGAP3Q86VI3 1631 aa25.81■■□□□ 1.72
CGREF1-201ENST00000260595 KCNA6P17658 529 aa25.81■■□□□ 1.72
CGREF1-201ENST00000260595 E9PCH4 1651 aa25.8■■□□□ 1.72
CGREF1-201ENST00000260595 TMEM131LA2VDJ0 1609 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms