RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 PANK3Q9H999 370 aa12.16□□□□□ -0.46
CTDSPL2-201ENST00000260327 ANKRD30AQ9BXX3 1397 aa12.15□□□□□ -0.46
CTDSPL2-201ENST00000260327 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.467e-8■■■■■ 82.1
CTDSPL2-201ENST00000260327 CCDC18Q5T9S5 1454 aa12.15□□□□□ -0.46
CTDSPL2-201ENST00000260327 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
CTDSPL2-201ENST00000260327 GOLGA6L1Q8N7Z2 621 aa12.14□□□□□ -0.47
CTDSPL2-201ENST00000260327 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
CTDSPL2-201ENST00000260327 KANK1Q14678 1352 aa12.14□□□□□ -0.47
CTDSPL2-201ENST00000260327 KIAA1211Q6ZU35 1233 aa12.13□□□□□ -0.47
CTDSPL2-201ENST00000260327 R3HCC1Q9Y3T6 440 aaKnown RBP12.13□□□□□ -0.47
CTDSPL2-201ENST00000260327 ZNF592Q92610 1267 aa12.13□□□□□ -0.47
CTDSPL2-201ENST00000260327 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
CTDSPL2-201ENST00000260327 USP47Q96K76 1375 aa12.12□□□□□ -0.47
CTDSPL2-201ENST00000260327 LMOD2Q6P5Q4 547 aa12.12□□□□□ -0.47
CTDSPL2-201ENST00000260327 GGT6Q6P531 493 aa12.12□□□□□ -0.47
CTDSPL2-201ENST00000260327 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
CTDSPL2-201ENST00000260327 RBM10P98175 930 aaKnown RBP12.11□□□□□ -0.47
CTDSPL2-201ENST00000260327 NOC3LQ8WTT2 800 aaKnown RBP12.11□□□□□ -0.47
CTDSPL2-201ENST00000260327 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.11□□□□□ -0.47
CTDSPL2-201ENST00000260327 GNL2Q13823 731 aaKnown RBP12.11□□□□□ -0.47
CTDSPL2-201ENST00000260327 SKOR2Q2VWA4 1001 aaPredicted RBP12.11□□□□□ -0.47
CTDSPL2-201ENST00000260327 PHF14O94880 888 aa12.1□□□□□ -0.47
CTDSPL2-201ENST00000260327 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
CTDSPL2-201ENST00000260327 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
CTDSPL2-201ENST00000260327 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
CTDSPL2-201ENST00000260327 WASHC2AQ641Q2 1341 aa12.09□□□□□ -0.47
CTDSPL2-201ENST00000260327 PHLDB1Q86UU1 1377 aa12.09□□□□□ -0.47
CTDSPL2-201ENST00000260327 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.48
CTDSPL2-201ENST00000260327 CCAR2Q8N163 923 aaKnown RBP12.08□□□□□ -0.48
CTDSPL2-201ENST00000260327 FRAT2O75474 233 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL2-201ENST00000260327 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL2-201ENST00000260327 CCDC7Q96M83 1385 aa12.08□□□□□ -0.48
CTDSPL2-201ENST00000260327 ST18O60284 1047 aa12.08□□□□□ -0.48
CTDSPL2-201ENST00000260327 RTF1Q92541 710 aaKnown RBP12.08□□□□□ -0.48
CTDSPL2-201ENST00000260327 TPM4P67936 248 aa12.07□□□□□ -0.48
CTDSPL2-201ENST00000260327 HDGFL2Q7Z4V5 671 aaPredicted RBP12.07□□□□□ -0.48
CTDSPL2-201ENST00000260327 APAF1O14727 1248 aa12.07□□□□□ -0.48
CTDSPL2-201ENST00000260327 KIF21BO75037 1637 aa12.07□□□□□ -0.48
CTDSPL2-201ENST00000260327 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
CTDSPL2-201ENST00000260327 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
CTDSPL2-201ENST00000260327 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
CTDSPL2-201ENST00000260327 ERCC6Q03468 1493 aa12.05□□□□□ -0.48
CTDSPL2-201ENST00000260327 MSH5O43196 834 aa12.05□□□□□ -0.48
CTDSPL2-201ENST00000260327 ELL2O00472 640 aaPredicted RBP12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 SETQ01105 290 aaPredicted RBP12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 MLECQ14165 292 aa12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 SLC4A10Q6U841 1118 aa12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 CREBRFQ8IUR6 639 aa12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 CNTLNQ9NXG0 1405 aa12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 ANKRD45Q5TZF3 282 aa12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 EIF3AQ14152 1382 aaKnown RBP12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 E9PSI1 815 aa12.04□□□□□ -0.48
CTDSPL2-201ENST00000260327 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
CTDSPL2-201ENST00000260327 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
CTDSPL2-201ENST00000260327 MRE11P49959 708 aa12.03□□□□□ -0.48
CTDSPL2-201ENST00000260327 CDCA7LQ96GN5 454 aa12.02□□□□□ -0.48
CTDSPL2-201ENST00000260327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
CTDSPL2-201ENST00000260327 KIF3BO15066 747 aa12.02□□□□□ -0.49
CTDSPL2-201ENST00000260327 PDE4CQ08493 712 aa12.02□□□□□ -0.49
CTDSPL2-201ENST00000260327 MCTP1Q6DN14 999 aa12.02□□□□□ -0.49
CTDSPL2-201ENST00000260327 CHMP3Q9Y3E7 222 aa12.01□□□□□ -0.49
CTDSPL2-201ENST00000260327 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
CTDSPL2-201ENST00000260327 TPM2P07951 284 aa12.01□□□□□ -0.49
CTDSPL2-201ENST00000260327 NASPP49321 788 aaPredicted RBP12.01□□□□□ -0.49
CTDSPL2-201ENST00000260327 CCDC144AA2RUR9 1427 aa12.01□□□□□ -0.49
CTDSPL2-201ENST00000260327 CGNL1Q0VF96 1302 aa12.01□□□□□ -0.49
CTDSPL2-201ENST00000260327 PATL2C9JE40 543 aaKnown RBP12.01□□□□□ -0.49
CTDSPL2-201ENST00000260327 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
CTDSPL2-201ENST00000260327 CCDC184Q52MB2 194 aa12□□□□□ -0.49
CTDSPL2-201ENST00000260327 KIF16BQ96L93 1317 aa12□□□□□ -0.49
CTDSPL2-201ENST00000260327 ZKSCAN2Q63HK3 967 aa12□□□□□ -0.49
CTDSPL2-201ENST00000260327 GOLGA6L19H0YKK7 550 aa12□□□□□ -0.49
CTDSPL2-201ENST00000260327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12□□□□□ -0.492e-6■■■■□ 22.1
CTDSPL2-201ENST00000260327 CLSTN1O94985 981 aa11.99□□□□□ -0.49
CTDSPL2-201ENST00000260327 TRAK2O60296 914 aa11.99□□□□□ -0.49
CTDSPL2-201ENST00000260327 RNF214Q8ND24 703 aa11.99□□□□□ -0.49
CTDSPL2-201ENST00000260327 UACAQ9BZF9 1416 aa11.99□□□□□ -0.49
CTDSPL2-201ENST00000260327 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
CTDSPL2-201ENST00000260327 TEX35Q5T0J7 233 aa11.98□□□□□ -0.49
CTDSPL2-201ENST00000260327 FGD6Q6ZV73 1430 aa11.98□□□□□ -0.49
CTDSPL2-201ENST00000260327 BECN2A8MW95 431 aa11.98□□□□□ -0.49
CTDSPL2-201ENST00000260327 EFCAB2Q5VUJ9 269 aa11.98□□□□□ -0.49
CTDSPL2-201ENST00000260327 ZNF644Q9H582 1327 aaPredicted RBP11.98□□□□□ -0.49
CTDSPL2-201ENST00000260327 MAP7D2Q96T17 732 aa11.98□□□□□ -0.49
CTDSPL2-201ENST00000260327 ATAD2BQ9ULI0 1458 aa11.98□□□□□ -0.49
CTDSPL2-201ENST00000260327 PANK1Q8TE04 598 aa11.97□□□□□ -0.49
CTDSPL2-201ENST00000260327 HMMRO75330 724 aa11.97□□□□□ -0.49
CTDSPL2-201ENST00000260327 RILPL2Q969X0 211 aa11.97□□□□□ -0.49
CTDSPL2-201ENST00000260327 LRRC9Q6ZRR7 1453 aa11.97□□□□□ -0.49
CTDSPL2-201ENST00000260327 TPM3P06753 285 aa11.97□□□□□ -0.49
CTDSPL2-201ENST00000260327 STK31Q9BXU1 1019 aa11.97□□□□□ -0.49
CTDSPL2-201ENST00000260327 IFT57Q9NWB7 429 aa11.97□□□□□ -0.49
CTDSPL2-201ENST00000260327 TERF2IPQ9NYB0 399 aa11.96□□□□□ -0.49
CTDSPL2-201ENST00000260327 GPS2Q13227 327 aa11.96□□□□□ -0.5
CTDSPL2-201ENST00000260327 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
CTDSPL2-201ENST00000260327 SF3A1Q15459 793 aaKnown RBP11.95□□□□□ -0.5
CTDSPL2-201ENST00000260327 C22orf23Q9BZE7 217 aa11.95□□□□□ -0.5
CTDSPL2-201ENST00000260327 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
CTDSPL2-201ENST00000260327 MTERF4Q7Z6M4 381 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms